Email l.a.kelley@imperial.ac.uk Description P52614 Date Thu Jan 5 12:05:53 GMT 2012 Unique Job ID f3409daa45c254e5

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2rrlA_ 99.9 59 PDB header:protein transport Chain: A: PDB Molecule:flagellar hook-length control protein; PDBTitle: solution structure of the c-terminal domain of the flik 2 d1k28a1 46.0 30 Fold:OB-fold Superfamily:gp5 N-terminal domain-like Family:gp4 N-terminal domain-like 3 d1byna_ 35.7 36 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 4 d2pofa1 31.9 24 Fold:HIT-like Superfamily:HIT-like Family:CDH-like 5 c3ddcB_ 30.8 17 PDB header:hydrolase/apoptosis Chain: B: PDB Molecule:ras association domain-containing family protein 5; PDBTitle: crystal structure of nore1a in complex with ras 6 c1uv7A_ 27.0 24 PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae 7 d1uv7a_ 27.0 24 Fold:RRF/tRNA synthetase additional domain-like Superfamily:General secretion pathway protein M, EpsM Family:General secretion pathway protein M, EpsM 8 d1bcoa1 26.9 29 Fold:mu transposase, C-terminal domain Superfamily:mu transposase, C-terminal domain Family:mu transposase, C-terminal domain 9 c2e62A_ 26.7 31 PDB header:rna binding protein Chain: A: PDB Molecule:protein at5g25060; PDBTitle: solution structure of the cwf21 domain in protein aak25922 10 c1pdlC_ 22.6 32 PDB header:hydrolase Chain: C: PDB Molecule:tail-associated lysozyme; PDBTitle: fitting of gp5 in the cryoem reconstruction of the2 bacteriophage t4 baseplate 11 d2rnrb1 20.5 16 Fold:PH domain-like barrel Superfamily:PH domain-like Family:TFIIH domain 12 c2bolA_ 19.2 16 PDB header:heat shock protein Chain: A: PDB Molecule:small heat shock protein; PDBTitle: crystal structure and assembly of tsp36, a metazoan small2 heat shock protein 13 d2gy9i1 18.9 17 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 14 d2vqei1 18.0 22 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 15 c3q9qB_ 17.9 14 PDB header:chaperone Chain: B: PDB Molecule:heat shock protein beta-1; PDBTitle: hspb1 fragment second crystal form 16 c2enpA_ 17.2 22 PDB header:transport protein Chain: A: PDB Molecule:b/k protein; PDBTitle: solution structure of the first c2 domain from human b/k2 protein 17 d2hiya1 16.2 25 Fold:SP0830-like Superfamily:SP0830-like Family:SP0830-like 18 d2r83a1 14.9 18 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 19 c2ns5A_ 14.3 11 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: the conserved n-terminal domain of par-3 adopts a novel pb1-2 like structure required for par-3 oligomerization and3 apical membrane localization 20 c3hugA_ 14.0 33 PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl 21 c1qysA_ not modelled 13.6 14 PDB header:de novo protein Chain: A: PDB Molecule:top7; PDBTitle: crystal structure of top7: a computationally designed2 protein with a novel fold 22 c2d8kA_ not modelled 13.6 18 PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:synaptotagmin vii; PDBTitle: solution structure of the first c2 domain of synaptotagmin2 vii 23 d1xuva_ not modelled 13.4 5 Fold:TBP-like Superfamily:Bet v1-like Family:AHSA1 domain 24 c2nnzA_ not modelled 12.7 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: solution structure of the hypothetical protein af2241 from2 archaeoglobus fulgidus 25 d2p5ka1 not modelled 12.5 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain 26 c2b3rA_ not modelled 12.5 19 PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol-4-phosphate 3-kinase c2 domain- PDBTitle: crystal structure of the c2 domain of class ii phosphatidylinositide2 3-kinase c2 27 d1u0ua2 not modelled 12.3 16 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 28 d1cfza_ not modelled 12.1 36 Fold:Phosphorylase/hydrolase-like Superfamily:HybD-like Family:Hydrogenase maturating endopeptidase HybD 29 d1zx8a1 not modelled 12.0 17 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:TM1367-like 30 d1uowa_ not modelled 12.0 18 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 31 d2cfxa1 not modelled 11.7 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 32 d3b7sa2 not modelled 11.5 6 Fold:Leukotriene A4 hydrolase N-terminal domain Superfamily:Leukotriene A4 hydrolase N-terminal domain Family:Leukotriene A4 hydrolase N-terminal domain 33 d1dsya_ not modelled 11.4 16 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 34 d1go3e2 not modelled 11.3 18 Fold:Dodecin subunit-like Superfamily:N-terminal, heterodimerisation domain of RBP7 (RpoE) Family:N-terminal, heterodimerisation domain of RBP7 (RpoE) 35 d1u0ma2 not modelled 11.2 20 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 36 d2cg4a1 not modelled 11.1 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 37 d1b4aa1 not modelled 11.0 32 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain 38 d2j0wa3 not modelled 11.0 9 Fold:Ferredoxin-like Superfamily:ACT-like Family:Aspartokinase allosteric domain-like 39 d2j07a2 not modelled 10.7 27 Fold:Cryptochrome/photolyase, N-terminal domain Superfamily:Cryptochrome/photolyase, N-terminal domain Family:Cryptochrome/photolyase, N-terminal domain 40 d1cc1l_ not modelled 10.7 26 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 41 d1f9na1 not modelled 10.7 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain 42 c2jvfA_ not modelled 10.5 29 PDB header:de novo protein Chain: A: PDB Molecule:de novo protein m7; PDBTitle: solution structure of m7, a computationally-designed2 artificial protein 43 c2nscA_ not modelled 10.5 17 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: structures of and interactions between domains of trigger factor from2 themotoga maritima 44 d2c35b2 not modelled 10.3 45 Fold:Dodecin subunit-like Superfamily:N-terminal, heterodimerisation domain of RBP7 (RpoE) Family:N-terminal, heterodimerisation domain of RBP7 (RpoE) 45 d1wuil1 not modelled 10.3 19 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 46 d1rh8a_ not modelled 10.3 23 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 47 d1dqva2 not modelled 10.3 26 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 48 d1rsya_ not modelled 10.2 35 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 49 c2jqzA_ not modelled 10.2 31 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase smurf2; PDBTitle: solution structure of the c2 domain of human smurf2 50 d1i1ga1 not modelled 10.1 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 51 c1b4aA_ not modelled 10.0 32 PDB header:repressor Chain: A: PDB Molecule:arginine repressor; PDBTitle: structure of the arginine repressor from bacillus stearothermophilus 52 d2vv5a2 not modelled 9.9 11 Fold:Ferredoxin-like Superfamily:Mechanosensitive channel protein MscS (YggB), C-terminal domain Family:Mechanosensitive channel protein MscS (YggB), C-terminal domain 53 d1txka1 not modelled 9.8 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 54 d1imua_ not modelled 9.7 10 Fold:Ribosome binding protein Y (YfiA homologue) Superfamily:Ribosome binding protein Y (YfiA homologue) Family:Ribosome binding protein Y (YfiA homologue) 55 c3ereD_ not modelled 9.6 37 PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator 56 c2dmgA_ not modelled 9.5 18 PDB header:lipid binding protein Chain: A: PDB Molecule:kiaa1228 protein; PDBTitle: solution structure of the third c2 domain of kiaa12282 protein 57 c3bbnI_ not modelled 9.5 17 PDB header:ribosome Chain: I: PDB Molecule:ribosomal protein s9; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 58 d1y14b2 not modelled 9.4 36 Fold:Dodecin subunit-like Superfamily:N-terminal, heterodimerisation domain of RBP7 (RpoE) Family:N-terminal, heterodimerisation domain of RBP7 (RpoE) 59 c2q3xA_ not modelled 9.3 20 PDB header:transport protein Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein 1; PDBTitle: the rim1alpha c2b domain 60 d2cu6a1 not modelled 8.9 16 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 61 c2chdA_ not modelled 8.9 35 PDB header:protein transport Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: crystal structure of the c2a domain of rabphilin-3a 62 d1pa4a_ not modelled 8.9 15 Fold:Alpha-lytic protease prodomain-like Superfamily:Ribosome-binding factor A, RbfA Family:Ribosome-binding factor A, RbfA 63 c3k12F_ not modelled 8.9 19 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:uncharacterized protein a6v7t0; PDBTitle: crystal structure of an uncharacterized protein a6v7t0 from2 pseudomonas aeruginosa 64 d2cyya1 not modelled 8.8 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 65 d2oo3a1 not modelled 8.7 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:LPG1296-like 66 d1a25a_ not modelled 8.5 14 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 67 c2kyzA_ not modelled 8.4 17 PDB header:metal binding protein Chain: A: PDB Molecule:heavy metal binding protein; PDBTitle: nmr structure of heavy metal binding protein tm0320 from thermotoga2 maritima 68 c3tqmD_ not modelled 8.3 13 PDB header:protein binding Chain: D: PDB Molecule:ribosome-associated factor y; PDBTitle: structure of an ribosomal subunit interface protein from coxiella2 burnetii 69 d1oiza1 not modelled 8.1 25 Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain 70 c3gtzA_ not modelled 8.1 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative translation initiation inhibitor; PDBTitle: crystal structure of a putative translation initiation inhibitor from2 salmonella typhimurium 71 d1dqva1 not modelled 8.1 14 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 72 d1k0ra4 not modelled 8.0 25 Fold:Transcription factor NusA, N-terminal domain Superfamily:Transcription factor NusA, N-terminal domain Family:Transcription factor NusA, N-terminal domain 73 c2dvzA_ not modelled 7.9 7 PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of a periplasmic transporter 74 d1u0bb1 not modelled 7.8 38 Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 75 d2qqsa2 not modelled 7.8 27 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 76 d1bi5a2 not modelled 7.6 13 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 77 d1f46a_ not modelled 7.5 26 Fold:TBP-like Superfamily:Cell-division protein ZipA, C-terminal domain Family:Cell-division protein ZipA, C-terminal domain 78 c2ds4A_ not modelled 7.5 7 PDB header:protein binding Chain: A: PDB Molecule:tripartite motif protein 45; PDBTitle: solution structure of the filamin domain from human2 tripartite motif protein 45 79 c3d01G_ not modelled 7.4 7 PDB header:structural genomics, unknown function Chain: G: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the protein atu1372 with unknown function from2 agrobacterium tumefaciens 80 d1fe0a_ not modelled 7.4 18 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 81 d1e3db_ not modelled 7.4 18 Fold:HydB/Nqo4-like Superfamily:HydB/Nqo4-like Family:Nickel-iron hydrogenase, large subunit 82 d1bkna2 not modelled 7.3 6 Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Family:DNA gyrase/MutL, N-terminal domain 83 d1lb2b_ not modelled 7.3 32 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 84 d1aoya_ not modelled 7.2 32 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Arginine repressor (ArgR), N-terminal DNA-binding domain 85 d1ugka_ not modelled 7.2 19 Fold:C2 domain-like Superfamily:C2 domain (Calcium/lipid-binding domain, CaLB) Family:Synaptotagmin-like (S variant) 86 c2v51E_ not modelled 7.2 29 PDB header:structural protein/contractile protein Chain: E: PDB Molecule:mkl/myocardin-like protein 1; PDBTitle: structure of mal-rpel1 complexed to actin 87 c2kzfA_ not modelled 7.2 20 PDB header:ribosomal protein Chain: A: PDB Molecule:ribosome-binding factor a; PDBTitle: solution nmr structure of the thermotoga maritima protein tm0855 a2 putative ribosome binding factor a 88 d2qqra2 not modelled 7.2 27 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 89 c1u0bB_ not modelled 7.1 31 PDB header:ligase/rna Chain: B: PDB Molecule:cysteinyl trna; PDBTitle: crystal structure of cysteinyl-trna synthetase binary2 complex with trnacys 90 d1g0da2 not modelled 7.0 9 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 91 d1dnpa2 not modelled 7.0 41 Fold:Cryptochrome/photolyase, N-terminal domain Superfamily:Cryptochrome/photolyase, N-terminal domain Family:Cryptochrome/photolyase, N-terminal domain 92 c2klrA_ not modelled 6.9 12 PDB header:chaperone Chain: A: PDB Molecule:alpha-crystallin b chain; PDBTitle: solid-state nmr structure of the alpha-crystallin domain in alphab-2 crystallin oligomers 93 c3lybC_ not modelled 6.9 21 PDB header:hydrolase Chain: C: PDB Molecule:putative endoribonuclease; PDBTitle: structure of putative endoribonuclease(kp1_3112) from2 klebsiella pneumoniae 94 c2v51F_ not modelled 6.9 44 PDB header:structural protein/contractile protein Chain: F: PDB Molecule:mkl/myocardin-like protein 1; PDBTitle: structure of mal-rpel1 complexed to actin 95 c2e85B_ not modelled 6.9 21 PDB header:hydrolase Chain: B: PDB Molecule:hydrogenase 3 maturation protease; PDBTitle: crystal structure of the hydrogenase 3 maturation protease 96 d1wlha1 not modelled 6.8 20 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 97 c2gjhA_ not modelled 6.8 21 PDB header:de novo protein Chain: A: PDB Molecule:designed protein; PDBTitle: nmr structure of cfr (c-terminal fragment of2 computationally designed novel-topology protein top7) 98 c2r83B_ not modelled 6.7 36 PDB header:endocytosis, exocytosis Chain: B: PDB Molecule:synaptotagmin-1; PDBTitle: crystal structure analysis of human synaptotagmin 1 c2a-c2b 99 d2ns9a1 not modelled 6.7 9 Fold:TBP-like Superfamily:Bet v1-like Family:CoxG-like