PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1dnpa2

Fold library id	Fold	Superfamily	Family
d1dnpa2	Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase, N-terminal domain	Cryptochrome/photolyase, N-terminal domain

Links to external resources
Added to library: Tue Mar 16 14:25:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T H L V W F R Q D L R L H D N L A L A A A C R N S S A R V L A L Y I A T P R Q W A T H N M S P R Q A E L I N A Q L N G L Q I A L A E K G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
S S S T T S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P L L F R E V D D F V A S V E I V K Q V C A E N S V T H L F Y N Y Q Y E V N E R A R D V E V E R A L R N V V C E G F D D S V I L P P G A V M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
S
T T S
S S S S
T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200

Sequence T G N H E M Y K V F T P F K N A W L K R L R E G M P E C V A A P K V R S S G S I E P S P S I T L N Y P R Q S F D T A H F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S T
T T
S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	H	L	V	W	F	R	Q	D	L	R	L	H	D	N	L	A	L	A	A	A	C	R	N	S	S	A	R	V	L	A	L	Y	I	A	T	P	R	Q	W	A	T	H	N	M	S	P	R	Q	A	E	L	I	N	A	Q	L	N	G	L	Q	I	A	L	A	E	K	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S				S	T	T								S	S	S	T	T	S																T	T																							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	L	F	R	E	V	D	D	F	V	A	S	V	E	I	V	K	Q	V	C	A	E	N	S	V	T	H	L	F	Y	N	Y	Q	Y	E	V	N	E	R	A	R	D	V	E	V	E	R	A	L	R	N	V	V	C	E	G	F	D	D	S	V	I	L	P	P	G	A	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S																T											S															T	T	S								S	S	S	S		T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Sequence	T	G	N	H	E	M	Y	K	V	F	T	P	F	K	N	A	W	L	K	R	L	R	E	G	M	P	E	C	V	A	A	P	K	V	R	S	S	G	S	I	E	P	S	P	S	I	T	L	N	Y	P	R	Q	S	F	D	T	A	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S				S	S														T													T	T													S							T	T	T