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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1dqva2

Fold library idFoldSuperfamilyFamily
d1dqva2C2 domain-likeC2 domain (Calcium/lipid-binding domain, CaLB)Synaptotagmin-like (S variant)


Added to library: Tue Mar 16 12:39:34 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNP
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Known secondary structure (DSSP)


S


TTTTS



SSSS





TT

TTS





S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQ
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Known secondary structure (DSSP)






SGGGGS






SSS




SS
TT
TSSSSSSS
S
S


 .....
Sequence LVEEK
Predicted secondary structure




SS confidence




Known secondary structure (DSSP)
BB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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