Email l.a.kelley@imperial.ac.uk Description P33224 Date Thu Jan 5 11:51:23 GMT 2012 Unique Job ID ed64a9f22fc2245c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3djlA_ 100.0 100 PDB header:oxidoreductase Chain: A: PDB Molecule:protein aidb; PDBTitle: crystal structure of alkylation response protein e. coli aidb 2 c2z1qA_ 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl coa dehydrogenase 3 c3owaC_ 100.0 16 PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase complexed with fad from2 bacillus anthracis 4 c2uxwA_ 100.0 20 PDB header:oxidoreductase Chain: A: PDB Molecule:very-long-chain specific acyl-coa dehydrogenase; PDBTitle: crystal structure of human very long chain acyl-coa2 dehydrogenase (acadvl) 5 c2ix5A_ 100.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal; PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa 6 c2ddhA_ 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate 7 c1w07A_ 100.0 20 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: arabidopsis thaliana acyl-coa oxidase 1 8 c2fonA_ 100.0 20 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal acyl-coa oxidase 1a; PDBTitle: x-ray crystal structure of leacx1, an acyl-coa oxidase from2 lycopersicon esculentum (tomato) 9 c1ivhD_ 100.0 20 PDB header:oxidoreductase Chain: D: PDB Molecule:isovaleryl-coa dehydrogenase; PDBTitle: structure of human isovaleryl-coa dehydrogenase at 2.62 angstroms resolution: structural basis for substrate3 specificity 10 c2pg0B_ 100.0 23 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from geobacillus2 kaustophilus 11 c2a1tC_ 100.0 20 PDB header:oxidoreductase/electron transport Chain: C: PDB Molecule:acyl-coa dehydrogenase, medium-chain specific, PDBTitle: structure of the human mcad:etf e165betaa complex 12 c1rx0B_ 100.0 21 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 8, PDBTitle: crystal structure of isobutyryl-coa dehydrogenase complexed2 with substrate/ligand. 13 c3swoA_ 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of a glutaryl-coa dehydrogenase from mycobacterium2 smegmatis in complex with fadh2 14 c3oibB_ 100.0 22 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak 15 c2jifA_ 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:short/branched chain specific acyl-coa dehydrogenase; PDBTitle: structure of human short-branched chain acyl-coa2 dehydrogenase (acadsb) 16 c2wbiB_ 100.0 19 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 11; PDBTitle: crystal structure of human acyl-coa dehydrogenase 11 17 c3sf6A_ 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of glutaryl-coa dehydrogenase from mycobacterium2 smegmatis 18 c3mkhC_ 100.0 17 PDB header:oxidoreductase Chain: C: PDB Molecule:nitroalkane oxidase; PDBTitle: podospora anserina nitroalkane oxidase 19 c3r7kB_ 100.0 26 PDB header:oxidoreductase Chain: B: PDB Molecule:probable acyl coa dehydrogenase; PDBTitle: crystal structure of a probable acyl coa dehydrogenase from2 mycobacterium abscessus atcc 19977 / dsm 44196 20 c1egcB_ 100.0 19 PDB header:electron transfer Chain: B: PDB Molecule:medium chain acyl-coa dehydrogenase; PDBTitle: structure of t255e, e376g mutant of human medium chain acyl-2 coa dehydrogenase complexed with octanoyl-coa 21 c1bucB_ not modelled 100.0 23 PDB header:oxidoreductase Chain: B: PDB Molecule:butyryl-coa dehydrogenase; PDBTitle: three-dimensional structure of butyryl-coa dehydrogenase from2 megasphaera elsdenii 22 c1ukwA_ not modelled 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of medium-chain acyl-coa dehydrogenase2 from thermus thermophilus hb8 23 c1siqA_ not modelled 100.0 20 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: the crystal structure and mechanism of human glutaryl-coa2 dehydrogenase 24 c2vigC_ not modelled 100.0 25 PDB header:oxidoreductase Chain: C: PDB Molecule:short-chain specific acyl-coa dehydrogenase,; PDBTitle: crystal structure of human short-chain acyl coa2 dehydrogenase 25 c3pfdB_ not modelled 100.0 20 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of an acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to reduced flavin adenine dinucleotide solved3 by combined iodide ion sad mr 26 c2ebaI_ not modelled 100.0 18 PDB header:oxidoreductase Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase; PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus 27 c2cx9C_ not modelled 100.0 24 PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase 28 c1r2jA_ not modelled 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:protein fkbi; PDBTitle: fkbi for biosynthesis of methoxymalonyl extender unit of2 fk520 polyketide immunosuppresant 29 c3mpjG_ not modelled 100.0 22 PDB header:oxidoreductase Chain: G: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: structure of the glutaryl-coenzyme a dehydrogenase 30 c2rehD_ not modelled 100.0 15 PDB header:oxidoreductase Chain: D: PDB Molecule:nitroalkane oxidase; PDBTitle: mechanistic and structural analyses of the roles of arg4092 and asp402 in the reaction of the flavoprotein nitroalkane3 oxidase 31 c2dvlB_ not modelled 100.0 24 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of project tt0160 from thermus thermophilus hb8 32 c3eomD_ not modelled 100.0 19 PDB header:oxidoreductase Chain: D: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: 2.4 a crystal structure of native glutaryl-coa dehydrogenase from2 burkholderia pseudomallei 33 c3nf4B_ not modelled 100.0 21 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to flavin adenine dinucleotide 34 c3m9vA_ not modelled 100.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent oxidoreductase; PDBTitle: x-ray structure of a kijd3 in complex with dtdp 35 c2jbtA_ not modelled 100.0 12 PDB header:oxidoreductase Chain: A: PDB Molecule:p-hydroxyphenylacetate hydroxylase c2\:oxygenase PDBTitle: structure of the monooxygenase component of p-2 hydroxyphenylacetate hydroxylase from acinetobacter3 baumannii 36 c2rfqA_ not modelled 100.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:3-hsa hydroxylase, oxygenase; PDBTitle: crystal structure of 3-hsa hydroxylase from rhodococcus sp. rha1 37 c2or0B_ not modelled 100.0 14 PDB header:oxidoreductase Chain: B: PDB Molecule:hydroxylase; PDBTitle: structural genomics, the crystal structure of a putative hydroxylase2 from rhodococcus sp. rha1 38 c3mxlB_ not modelled 100.0 16 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrososynthase; PDBTitle: crystal structure of nitrososynthase from micromonospora carbonacea2 var. africana 39 c3hwcD_ not modelled 100.0 11 PDB header:oxidoreductase Chain: D: PDB Molecule:chlorophenol-4-monooxygenase component 2; PDBTitle: crystal structure of chlorophenol 4-monooxygenase (tftd) of2 burkholderia cepacia ac1100 40 c2yyjA_ not modelled 100.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylacetate-3-hydroxylase; PDBTitle: crystal structure of the oxygenase component (hpab) of 4-2 hydroxyphenylacetate 3-monooxygenase complexed with fad and 4-3 hydroxyphenylacetate 41 d1w07a1 not modelled 100.0 21 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:acyl-CoA oxidase C-terminal domains 42 c1u8vA_ not modelled 100.0 16 PDB header:lyase, isomerase Chain: A: PDB Molecule:gamma-aminobutyrate metabolism PDBTitle: crystal structure of 4-hydroxybutyryl-coa dehydratase from2 clostridium aminobutyricum: radical catalysis involving a3 [4fe-4s] cluster and flavin 43 d2ddha1 not modelled 100.0 17 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:acyl-CoA oxidase C-terminal domains 44 d1rx0a1 not modelled 100.0 23 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 45 d2ddha3 not modelled 100.0 16 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:acyl-CoA oxidase N-terminal domains 46 d1siqa1 not modelled 100.0 21 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 47 d3mdea1 not modelled 100.0 24 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 48 d1ivha1 not modelled 100.0 20 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 49 d2c12a1 not modelled 100.0 17 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 50 d1egda1 not modelled 100.0 24 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 51 d1jqia1 not modelled 100.0 27 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 52 d1ukwa1 not modelled 100.0 27 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 53 d1w07a3 not modelled 100.0 17 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:acyl-CoA oxidase N-terminal domains 54 d2d29a1 not modelled 100.0 25 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 55 d1buca1 not modelled 100.0 24 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 56 d1jqia2 not modelled 100.0 21 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 57 d1r2ja1 not modelled 100.0 22 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 58 d1buca2 not modelled 99.9 22 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 59 d1r2ja2 not modelled 99.9 19 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 60 d2c12a2 not modelled 99.9 14 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 61 d1ukwa2 not modelled 99.9 21 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 62 d2d29a2 not modelled 99.9 23 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 63 d1ivha2 not modelled 99.9 19 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 64 d1rx0a2 not modelled 99.9 19 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 65 d3mdea2 not modelled 99.9 16 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 66 d1egda2 not modelled 99.9 15 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 67 d1siqa2 not modelled 99.9 18 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 68 d1u8va2 not modelled 99.7 17 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 69 d1u8va1 not modelled 89.5 14 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 70 d1w96a2 not modelled 27.0 27 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 71 d1ulza2 not modelled 25.0 20 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 72 d2j9ga2 not modelled 22.9 14 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 73 d2plsa1 not modelled 20.3 54 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like 74 c3ktwA_ not modelled 19.5 18 PDB header:rna/rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: crystal structure of the srp19/s-domain srp rna complex of sulfolobus2 solfataricus 75 d2ezwa1 not modelled 18.4 18 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit 76 d2cnza1 not modelled 14.7 21 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Pilus subunits 77 d2co3a1 not modelled 14.7 21 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Pilus subunits 78 c2b9kA_ not modelled 11.9 33 PDB header:antibiotic Chain: A: PDB Molecule:antimicrobial peptide lci; PDBTitle: solution structure of lci, an amp from bacillus subtilis 79 d1udxa3 not modelled 11.4 13 Fold:Obg GTP-binding protein C-terminal domain Superfamily:Obg GTP-binding protein C-terminal domain Family:Obg GTP-binding protein C-terminal domain 80 d1saza2 not modelled 10.4 15 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Acetokinase-like 81 c2qsdB_ not modelled 10.1 31 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: crystal structure of a protein il1583 from idiomarina loihiensis 82 d1wgsa_ not modelled 10.1 31 Fold:SH3-like barrel Superfamily:Chromo domain-like Family:Chromo barrel domain 83 d1xsqa_ not modelled 9.1 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Ureidoglycolate hydrolase AllA 84 c1rr7A_ not modelled 8.1 20 PDB header:transcription Chain: A: PDB Molecule:middle operon regulator; PDBTitle: crystal structure of the middle operon regulator protein of2 bacteriophage mu 85 d1rr7a_ not modelled 8.1 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Middle operon regulator, Mor 86 d1c9ka_ not modelled 8.1 35 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 87 d1vjia_ not modelled 8.0 21 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 88 d1oyaa_ not modelled 7.9 21 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 89 c3eopB_ not modelled 7.7 15 PDB header:unknown function Chain: B: PDB Molecule:thymocyte nuclear protein 1; PDBTitle: crystal structure of the duf55 domain of human thymocyte nuclear2 protein 1 90 c3ghnA_ not modelled 7.6 37 PDB header:hydrolase Chain: A: PDB Molecule:a disintegrin and metalloproteinase with thrombospondin PDBTitle: crystal structure of the exosite-containing fragment of human adamts132 (form-2) 91 c3gquA_ not modelled 7.6 24 PDB header:rna binding protein Chain: A: PDB Molecule:nop5p protein; PDBTitle: pyrococcus horikoshii nop5 rna binding domain 92 d2bdra1 not modelled 7.6 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Ureidoglycolate hydrolase AllA 93 c2aydA_ not modelled 7.5 33 PDB header:transcription Chain: A: PDB Molecule:wrky transcription factor 1; PDBTitle: crystal structure of the c-terminal wrky domainof atwrky1,2 an sa-induced and partially npr1-dependent transcription3 factor 94 d1co4a_ not modelled 7.5 29 Fold:Zinc domain conserved in yeast copper-regulated transcription factors Superfamily:Zinc domain conserved in yeast copper-regulated transcription factors Family:Zinc domain conserved in yeast copper-regulated transcription factors 95 d1djqa1 not modelled 7.3 21 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 96 d1k8fa_ not modelled 7.3 14 Fold:Single-stranded right-handed beta-helix Superfamily:C-terminal domain of adenylylcyclase associated protein Family:C-terminal domain of adenylylcyclase associated protein 97 c2ekoA_ not modelled 7.2 31 PDB header:transferase Chain: A: PDB Molecule:histone acetyltransferase htatip; PDBTitle: solution structure of ruh-073, a pseudo chromo domain from2 human cdna 98 c3gkaB_ not modelled 7.1 21 PDB header:oxidoreductase Chain: B: PDB Molecule:n-ethylmaleimide reductase; PDBTitle: crystal structure of n-ethylmaleimidine reductase from2 burkholderia pseudomallei 99 d1icpa_ not modelled 6.9 21 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases