Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	M	S	L	A	W	P	L	F	R	V	T	E	Q	A	A	L	A	A	W	P	Q	T	G	C	G	D	K	N	K	I	D	G	L	A	V	T	A	M	R	Q	A	L	N	D	V	A	F	R	G	R	V	V	I	G	E	G	E	I	D
Secondary structure
SS confidence
Disorder		?	?	?																					?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		H	A	P	M	L	W	I	G	E	E	V	G	K	G	D	G	P	E	V	D	I	A	V	D	P	I	E	G	T	R	M	V	A	M	G	Q	S	N	A	L	A	V	M	A	F	A	P	R	D	S	L	L	H	A	P	D	M	Y	M	K
Secondary structure
SS confidence
Disorder																																			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		K	L	V	V	N	R	L	A	A	G	A	I	D	L	S	L	P	L	T	D	N	L	R	N	V	A	K	A	L	G	K	P	L	D	K	L	R	M	V	T	L	D	K	P	R	L	S	A	A	I	E	E	A	T	Q	L	G	V	K	V
Secondary structure
SS confidence
Disorder																														?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		F	A	L	P	D	G	D	V	A	A	S	V	L	T	C	W	Q	D	N	P	Y	D	V	M	Y	T	I	G	G	A	P	E	G	V	I	S	A	C	A	V	K	A	L	G	G	D	M	Q	A	E	L	I	D	F	C	Q	A	K	G	D
Secondary structure
SS confidence
Disorder																?																																										?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		Y	T	E	N	R	Q	I	A	E	Q	E	R	K	R	C	K	A	M	G	V	D	V	N	R	V	Y	S	L	D	E	L	V	R	G	N	D	I	L	F	S	A	T	G	V	T	G	G	E	L	V	N	G	I	Q	Q	T	A	N	G	V
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?										?																																					?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Sequence		R	T	Q	T	L	L	I	G	G	A	D	Q	T	C	N	I	I	D	S	L	H
Secondary structure
SS confidence
Disorder									?											?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1ni9 chain A Region: 2 - 321 Aligned: 284 Modelled: 295 Confidence: 100.0% Identity: 56% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: GlpX-like bacterial fructose-1,6-bisphosphatase Phyre2 PDB 3luz chain A Region: 7 - 227 Aligned: 196 Modelled: 205 Confidence: 97.6% Identity: 15% PDB header:hydrolase Chain: A: PDB Molecule:extragenic suppressor protein suhb; PDBTitle: crystal structure of extragenic suppressor protein suhb from2 bartonella henselae, via combined iodide sad molecular replacement Phyre2 PDB 2qfl chain A Region: 1 - 227 Aligned: 203 Modelled: 210 Confidence: 96.9% Identity: 19% PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: structure of suhb: inositol monophosphatase and extragenic2 suppressor from e. coli Phyre2 PDB 1lbv chain A Region: 7 - 109 Aligned: 87 Modelled: 90 Confidence: 96.8% Identity: 21% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2czh chain B Region: 7 - 109 Aligned: 87 Modelled: 87 Confidence: 96.8% Identity: 25% PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: crystal structure of human myo-inositol monophosphatase 22 (impa2) with phosphate ion (orthorhombic form) Phyre2 PDB 2fvz chain B Region: 7 - 109 Aligned: 89 Modelled: 89 Confidence: 96.7% Identity: 25% PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: human inositol monophosphosphatase 2 Phyre2 PDB 2p3n chain B Region: 3 - 227 Aligned: 199 Modelled: 207 Confidence: 96.6% Identity: 20% PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: thermotoga maritima impase tm1415 Phyre2 PDB 1g0h chain A Region: 6 - 109 Aligned: 89 Modelled: 104 Confidence: 96.6% Identity: 17% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2pcr chain A Region: 7 - 109 Aligned: 78 Modelled: 83 Confidence: 96.4% Identity: 27% PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: crystal structure of myo-inositol-1(or 4)-monophosphatase (aq_1983)2 from aquifex aeolicus vf5 Phyre2 PDB 1xi6 chain A Region: 3 - 109 Aligned: 92 Modelled: 107 Confidence: 96.3% Identity: 18% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2q74 chain B Region: 7 - 227 Aligned: 195 Modelled: 198 Confidence: 96.3% Identity: 18% PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: mycobacterium tuberculosis suhb Phyre2 PDB 2hhm chain A Region: 7 - 109 Aligned: 89 Modelled: 89 Confidence: 95.6% Identity: 19% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 3b8b chain A Region: 30 - 227 Aligned: 184 Modelled: 182 Confidence: 95.2% Identity: 16% PDB header:hydrolase Chain: A: PDB Molecule:cysq, sulfite synthesis pathway protein; PDBTitle: crystal structure of cysq from bacteroides thetaiotaomicron, a2 bacterial member of the inositol monophosphatase family Phyre2 PDB 1vdw chain A Region: 7 - 109 Aligned: 88 Modelled: 103 Confidence: 94.9% Identity: 19% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 1inp chain A Region: 1 - 109 Aligned: 109 Modelled: 109 Confidence: 94.2% Identity: 21% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 1jp4 chain A Region: 2 - 227 Aligned: 211 Modelled: 214 Confidence: 94.1% Identity: 18% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 1d9q chain A Region: 7 - 97 Aligned: 83 Modelled: 91 Confidence: 89.1% Identity: 14% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 3uks chain B Region: 30 - 97 Aligned: 60 Modelled: 68 Confidence: 85.1% Identity: 15% PDB header:hydrolase Chain: B: PDB Molecule:sedoheptulose-1,7 bisphosphatase, putative; PDBTitle: 1.85 angstrom crystal structure of putative sedoheptulose-1,72 bisphosphatase from toxoplasma gondii Phyre2 PDB 1ka1 chain A Region: 3 - 109 Aligned: 92 Modelled: 93 Confidence: 81.6% Identity: 28% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 1g6s chain A Region: 119 - 262 Aligned: 135 Modelled: 144 Confidence: 81.3% Identity: 16% Fold: IF3-like Superfamily: EPT/RTPC-like Family: Enolpyruvate transferase, EPT Phyre2 1 d1ni9a_ 2 c3luzA_ 3 c2qflA_ 4 d1lbva_ 5 c2czhB_ 6 c2fvzB_ 7 c2p3nB_ 8 d1g0ha_ 9 c2pcrA_ 10 d1xi6a_ 11 c2q74B_ 12 d2hhma_ 13 c3b8bA_ 14 d1vdwa_ 15 d1inpa_ 16 d1jp4a_ 17 d1d9qa_ 18 c3uksB_ 19 d1ka1a_ 20 d1g6sa_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ni9a_ 100.0 56 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:GlpX-like bacterial fructose-1,6-bisphosphatase 2 c3luzA_ 97.6 15 PDB header:hydrolase Chain: A: PDB Molecule:extragenic suppressor protein suhb; PDBTitle: crystal structure of extragenic suppressor protein suhb from2 bartonella henselae, via combined iodide sad molecular replacement 3 c2qflA_ 96.9 19 PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: structure of suhb: inositol monophosphatase and extragenic2 suppressor from e. coli 4 d1lbva_ 96.8 21 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 5 c2czhB_ 96.8 25 PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: crystal structure of human myo-inositol monophosphatase 22 (impa2) with phosphate ion (orthorhombic form) 6 c2fvzB_ 96.7 25 PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: human inositol monophosphosphatase 2 7 c2p3nB_ 96.6 20 PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: thermotoga maritima impase tm1415 8 d1g0ha_ 96.6 17 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 9 c2pcrA_ 96.4 27 PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: crystal structure of myo-inositol-1(or 4)-monophosphatase (aq_1983)2 from aquifex aeolicus vf5 10 d1xi6a_ 96.3 18 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 11 c2q74B_ 96.3 18 PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: mycobacterium tuberculosis suhb 12 d2hhma_ 95.6 19 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 13 c3b8bA_ 95.2 16 PDB header:hydrolase Chain: A: PDB Molecule:cysq, sulfite synthesis pathway protein; PDBTitle: crystal structure of cysq from bacteroides thetaiotaomicron, a2 bacterial member of the inositol monophosphatase family 14 d1vdwa_ 94.9 19 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 15 d1inpa_ 94.2 21 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 16 d1jp4a_ 94.1 18 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 17 d1d9qa_ 89.1 14 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 18 c3uksB_ 85.1 15 PDB header:hydrolase Chain: B: PDB Molecule:sedoheptulose-1,7 bisphosphatase, putative; PDBTitle: 1.85 angstrom crystal structure of putative sedoheptulose-1,72 bisphosphatase from toxoplasma gondii 19 d1ka1a_ 81.6 28 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 20 d1g6sa_ 81.3 16 Fold:IF3-like Superfamily:EPT/RTPC-like Family:Enolpyruvate transferase, EPT 21 d1j5ta_ not modelled 75.7 11 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 22 c2yvkA_ not modelled 67.6 25 PDB header:isomerase Chain: A: PDB Molecule:methylthioribose-1-phosphate isomerase; PDBTitle: crystal structure of 5-methylthioribose 1-phosphate2 isomerase product complex from bacillus subtilis 23 c3a11D_ not modelled 60.7 20 PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 24 d1cjca2 not modelled 59.6 14 Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:N-terminal domain of adrenodoxin reductase-like 25 c3aerC_ not modelled 57.7 19 PDB header:oxidoreductase Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark 26 c3j08A_ not modelled 54.3 14 PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa 27 d1t5oa_ not modelled 53.9 19 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like 28 d2aeea1 not modelled 52.7 19 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 29 c3ecsD_ not modelled 52.6 25 PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha 30 c3j09A_ not modelled 49.0 14 PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa 31 d2a0ua1 not modelled 47.6 15 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like 32 d1spia_ not modelled 44.4 18 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 33 d1t9ka_ not modelled 44.1 18 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like 34 c3n91A_ not modelled 43.7 29 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a structural genomics, unknown function2 (bacova_03430) from bacteroides ovatus at 2.40 a resolution 35 c3pajA_ not modelled 40.3 17 PDB header:transferase Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase, carboxylating; PDBTitle: 2.00 angstrom resolution crystal structure of a quinolinate2 phosphoribosyltransferase from vibrio cholerae o1 biovar eltor str.3 n16961 36 c3rf7A_ not modelled 39.7 11 PDB header:oxidoreductase Chain: A: PDB Molecule:iron-containing alcohol dehydrogenase; PDBTitle: crystal structure of an iron-containing alcohol dehydrogenase2 (sden_2133) from shewanella denitrificans os-217 at 2.12 a resolution 37 c2kg4A_ not modelled 39.2 17 PDB header:cell cycle Chain: A: PDB Molecule:growth arrest and dna-damage-inducible protein PDBTitle: three-dimensional structure of human gadd45alpha in2 solution by nmr 38 d1vb5a_ not modelled 37.2 16 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like 39 c3gwpA_ not modelled 36.4 21 PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution 40 c2xdqA_ not modelled 35.7 12 PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex 41 d1lmb3_ not modelled 33.7 18 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 42 c3pdiB_ not modelled 33.0 14 PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen 43 d1u7pa_ not modelled 32.7 18 Fold:HAD-like Superfamily:HAD-like Family:Magnesium-dependent phosphatase-1, Mdp1 44 c2ejaB_ not modelled 31.0 15 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 aquifex aeolicus 45 d1m1nb_ not modelled 30.5 15 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 46 c3roiA_ not modelled 30.3 16 PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: 2.20 angstrom resolution structure of 3-phosphoshikimate 1-2 carboxyvinyltransferase (aroa) from coxiella burnetii 47 d1i4na_ not modelled 29.8 10 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 48 c2k2wA_ not modelled 28.2 20 PDB header:cell cycle Chain: A: PDB Molecule:recombination and dna repair protein; PDBTitle: second brct domain of nbs1 49 c2ewtA_ not modelled 27.9 23 PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of the dna-binding domain of bldd 50 d7reqa2 not modelled 27.7 15 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 51 d1vlja_ not modelled 27.4 7 Fold:Dehydroquinate synthase-like Superfamily:Dehydroquinate synthase-like Family:Iron-containing alcohol dehydrogenase 52 c2decA_ not modelled 25.6 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:325aa long hypothetical protein; PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 53 c3bfjK_ not modelled 25.4 18 PDB header:oxidoreductase Chain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase 54 c3ox4D_ not modelled 24.3 18 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 2; PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor 55 c1w2wJ_ not modelled 23.4 17 PDB header:isomerase Chain: J: PDB Molecule:5-methylthioribose-1-phosphate isomerase; PDBTitle: crystal structure of yeast ypr118w, a methylthioribose-1-2 phosphate isomerase related to regulatory eif2b subunits 56 c3e59A_ not modelled 23.4 22 PDB header:transferase Chain: A: PDB Molecule:pyoverdine biosynthesis protein pvca; PDBTitle: crystal structure of the pvca (pa2254) protein from pseudomonas2 aeruginosa 57 c3t76A_ not modelled 23.3 8 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator vanug; PDBTitle: crystal structure of transcriptional regulator vanug, form ii 58 d1wpga2 not modelled 23.2 12 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P 59 c3knzA_ not modelled 23.0 6 PDB header:sugar binding protein Chain: A: PDB Molecule:putative sugar binding protein; PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution 60 c2infB_ not modelled 22.9 26 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 bacillus subtilis 61 c2fhyL_ not modelled 22.0 25 PDB header:hydrolase Chain: L: PDB Molecule:fructose-1,6-bisphosphatase 1; PDBTitle: structure of human liver fpbase complexed with a novel2 benzoxazole as allosteric inhibitor 62 d1uc8a1 not modelled 21.2 20 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Lysine biosynthesis enzyme LysX, N-terminal domain 63 d1uj4a1 not modelled 20.5 19 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 64 d3by5a1 not modelled 20.5 18 Fold:CobE/GbiG C-terminal domain-like Superfamily:CobE/GbiG C-terminal domain-like Family:CobE/GbiG C-terminal domain-like 65 c3by5A_ not modelled 20.5 18 PDB header:biosynthetic protein Chain: A: PDB Molecule:cobalamin biosynthesis protein; PDBTitle: crystal structure of cobalamin biosynthesis protein chig from2 agrobacterium tumefaciens str. c58 66 c1oi7A_ not modelled 20.5 17 PDB header:synthetase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: the crystal structure of succinyl-coa synthetase alpha2 subunit from thermus thermophilus 67 c2gq1A_ not modelled 20.4 20 PDB header:hydrolase Chain: A: PDB Molecule:fructose-1,6-bisphosphatase; PDBTitle: crystal structure of recombinant type i fructose-1,6-bisphosphatase2 from escherichia coli complexed with sulfate ions 68 d1llib_ not modelled 19.4 19 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 69 c3r38A_ not modelled 19.4 23 PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine 1-carboxyvinyltransferase 1; PDBTitle: 2.23 angstrom resolution crystal structure of udp-n-acetylglucosamine2 1-carboxyvinyltransferase (mura) from listeria monocytogenes egd-e 70 c3ht4B_ not modelled 19.0 12 PDB header:lyase Chain: B: PDB Molecule:aluminum resistance protein; PDBTitle: crystal structure of the q81a77_baccr protein from bacillus2 cereus. northeast structural genomics consortium target3 bcr213 71 c2b8eB_ not modelled 18.7 15 PDB header:membrane protein Chain: B: PDB Molecule:cation-transporting atpase; PDBTitle: copa atp binding domain 72 c2z01A_ not modelled 18.7 9 PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of phosphoribosylaminoimidazole2 synthetase from geobacillus kaustophilus 73 c2duwA_ not modelled 18.1 16 PDB header:ligand binding protein Chain: A: PDB Molecule:putative coa-binding protein; PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae 74 d1v8ba2 not modelled 18.1 17 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:S-adenosylhomocystein hydrolase 75 d1m1na_ not modelled 17.8 19 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 76 c1x1oC_ not modelled 17.3 21 PDB header:transferase Chain: C: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of project id tt0268 from thermus thermophilus hb8 77 c3mwdB_ not modelled 16.7 12 PDB header:transferase Chain: B: PDB Molecule:atp-citrate synthase; PDBTitle: truncated human atp-citrate lyase with citrate bound 78 d2ofya1 not modelled 16.6 30 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 79 d1miob_ not modelled 16.3 19 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 80 d1mioa_ not modelled 16.2 13 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:Nitrogenase iron-molybdenum protein 81 d1utxa_ not modelled 16.1 25 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 82 c3bs3A_ not modelled 15.9 36 PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis 83 c3b7hA_ not modelled 15.7 25 PDB header:structural protein Chain: A: PDB Molecule:prophage lp1 protein 11; PDBTitle: crystal structure of the prophage lp1 protein 11 84 d1ccwa_ not modelled 15.3 23 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 85 c3fd0B_ not modelled 15.3 8 PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution 86 c3ff4A_ not modelled 14.8 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein chu_1412 87 c3lisB_ not modelled 14.7 27 PDB header:transcription Chain: B: PDB Molecule:csp231i c protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.csp231i (monoclinic form) 88 c3nklA_ not modelled 14.5 18 PDB header:oxidoreductase/lyase Chain: A: PDB Molecule:udp-d-quinovosamine 4-dehydrogenase; PDBTitle: crystal structure of udp-d-quinovosamine 4-dehydrogenase from vibrio2 fischeri 89 c3cnhA_ not modelled 14.5 13 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase family protein; PDBTitle: crystal structure of predicted hydrolase of haloacid dehalogenase-like2 superfamily (np_295428.1) from deinococcus radiodurans at 1.66 a3 resolution 90 c3ej6D_ not modelled 14.5 27 PDB header:oxidoreductase Chain: D: PDB Molecule:catalase-3; PDBTitle: neurospora crassa catalase-3 crystal structure 91 d2vgna3 not modelled 14.3 11 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like 92 c2jtvA_ not modelled 14.3 8 PDB header:structural genomics Chain: A: PDB Molecule:protein of unknown function; PDBTitle: solution structure of protein rpa3401, northeast structural genomics2 consortium target rpt7, ontario center for structural proteomics3 target rp3384 93 c3fkjA_ not modelled 14.1 15 PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerases; PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution 94 c3clhA_ not modelled 13.8 21 PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate synthase; PDBTitle: crystal structure of 3-dehydroquinate synthase (dhqs)from2 helicobacter pylori 95 d1x52a1 not modelled 13.5 11 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like 96 d1ejda_ not modelled 13.4 22 Fold:IF3-like Superfamily:EPT/RTPC-like Family:Enolpyruvate transferase, EPT 97 d1ri9a_ not modelled 13.1 20 Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain 98 c1ri9A_ not modelled 13.1 20 PDB header:signaling protein Chain: A: PDB Molecule:fyn-binding protein; PDBTitle: structure of a helically extended sh3 domain of the t cell2 adapter protein adap 99 d2cyga1 not modelled 13.0 9 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0