PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1oi7A_

Fold library id	PDB Header	Molecule	Title
c1oi7A_	PDB header: synthetase	Chain: A: PDB Molecule: succinyl-coa synthetase alpha chain;	PDBTitle: the crystal structure of succinyl-coa synthetase alpha2 subunit from thermus thermophilus

Links to external resources
Added to library: Tue Mar 16 13:23:33 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M I L V N R E T R V L V Q G I T G R E G Q F H T K Q M L T Y G T K I V A G V T P G K G G M E V L G V P V Y D T V K E A V A H H E V D A S I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T T T S T
T T
T T
T T S S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F V P A P A A A D A A L E A A H A G I P L I V L I T E G I P T L D M V R A V E E I K A L G S R L I G G N C P G I I S A E E T K I G I M P G H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S
T
S S S
T T T S S
G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V F K R G R V G I I S R S G T L T Y E A A A A L S Q A G L G T T T T V G I G G D P V I G T T F K D L L P L F N E D P E T E A V V L I G E I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
S
T T
S S S
S S
T
T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270

Sequence G S D E E E A A A W V K D H M K K P V V G F I G G R V G T P E S K L R A F A E A G I P V A D T I D E I V E L V K K A L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
S
S T
B
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	L	V	N	R	E	T	R	V	L	V	Q	G	I	T	G	R	E	G	Q	F	H	T	K	Q	M	L	T	Y	G	T	K	I	V	A	G	V	T	P	G	K	G	G	M	E	V	L	G	V	P	V	Y	D	T	V	K	E	A	V	A	H	H	E	V	D	A	S	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			T	T							T	T	T	S														T									T	T		T	T				T	T					S	S								S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	V	P	A	P	A	A	A	D	A	A	L	E	A	A	H	A	G	I	P	L	I	V	L	I	T	E	G	I	P	T	L	D	M	V	R	A	V	E	E	I	K	A	L	G	S	R	L	I	G	G	N	C	P	G	I	I	S	A	E	E	T	K	I	G	I	M	P	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T		S							S																		T						S	S	S						T	T	T					S	S		G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	F	K	R	G	R	V	G	I	I	S	R	S	G	T	L	T	Y	E	A	A	A	A	L	S	Q	A	G	L	G	T	T	T	T	V	G	I	G	G	D	P	V	I	G	T	T	F	K	D	L	L	P	L	F	N	E	D	P	E	T	E	A	V	V	L	I	G	E	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G											S															T	T											S	S	S			S	S											T		T	T										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Sequence	G	S	D	E	E	E	A	A	A	W	V	K	D	H	M	K	K	P	V	V	G	F	I	G	G	R	V	G	T	P	E	S	K	L	R	A	F	A	E	A	G	I	P	V	A	D	T	I	D	E	I	V	E	L	V	K	K	A	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S															S							S					S												T			B		S	S