Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP46891
DateThu Jan 5 12:04:39 GMT 2012
Unique Job IDe7ff3790611a99be

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3dnpA_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:stress response protein yhax;
PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis
Confidence and coverage
Confidence:100.0% Coverage: 96%
262 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDA
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Disorder  ??

























































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   .........70.........80.........90.........100.........110.........120
Sequence  YLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALL
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   .........130.........140.........150.........160.........170.........180
Sequence  QAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCL
Secondary structure 

















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   .........190.........200.........210.........220.........230.........240
Sequence  EVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAEL
Secondary structure 






















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   .........250.........260.........270..
Sequence  PHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
Secondary structure 



















SS confidence 































Disorder 


























?????
Disorder confidence 































 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3dnp chain A

3D model

Region: 2 - 266
Aligned: 262
Modelled: 264
Confidence: 100.0%
Identity: 20%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:stress response protein yhax;
PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis

Phyre2

PDB 3niw chain A

3D model

Region: 2 - 262
Aligned: 259
Modelled: 261
Confidence: 100.0%
Identity: 21%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase from2 bacteroides thetaiotaomicron

Phyre2

PDB 1nrw chain A

3D model

Region: 3 - 262
Aligned: 258
Modelled: 260
Confidence: 100.0%
Identity: 22%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 1nf2 chain A

3D model

Region: 1 - 262
Aligned: 259
Modelled: 262
Confidence: 100.0%
Identity: 22%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 3pgv chain B

3D model

Region: 1 - 262
Aligned: 254
Modelled: 261
Confidence: 100.0%
Identity: 34%
PDB header:hydrolase
Chain: B: PDB Molecule:haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution

Phyre2

PDB 1rlm chain A

3D model

Region: 2 - 270
Aligned: 266
Modelled: 269
Confidence: 100.0%
Identity: 18%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 3fzq chain A

3D model

Region: 1 - 261
Aligned: 255
Modelled: 261
Confidence: 100.0%
Identity: 18%
PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution

Phyre2

PDB 2qyh chain D

3D model

Region: 2 - 262
Aligned: 252
Modelled: 261
Confidence: 100.0%
Identity: 21%
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical conserved protein, gk1056;
PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426

Phyre2

PDB 3dao chain B

3D model

Region: 1 - 262
Aligned: 259
Modelled: 261
Confidence: 100.0%
Identity: 20%
PDB header:hydrolase
Chain: B: PDB Molecule:putative phosphatse;
PDBTitle: crystal structure of a putative phosphatse (eubrec_1417) from2 eubacterium rectale at 1.80 a resolution

Phyre2

PDB 2rbk chain A domain 1

3D model

Region: 3 - 261
Aligned: 251
Modelled: 259
Confidence: 100.0%
Identity: 17%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 2b30 chain A domain 1

3D model

Region: 1 - 264
Aligned: 263
Modelled: 264
Confidence: 100.0%
Identity: 19%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 1rkq chain A

3D model

Region: 1 - 262
Aligned: 260
Modelled: 262
Confidence: 100.0%
Identity: 24%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 3r4c chain A

3D model

Region: 1 - 261
Aligned: 252
Modelled: 261
Confidence: 100.0%
Identity: 21%
PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like hydrolase;
PDBTitle: divergence of structure and function among phosphatases of the2 haloalkanoate (had) enzyme superfamily: analysis of bt1666 from3 bacteroides thetaiotaomicron

Phyre2

PDB 3gyg chain A

3D model

Region: 2 - 265
Aligned: 244
Modelled: 245
Confidence: 100.0%
Identity: 14%
PDB header:hydrolase
Chain: A: PDB Molecule:ntd biosynthesis operon putative hydrolase ntdb;
PDBTitle: crystal structure of yhjk (haloacid dehalogenase-like hydrolase2 protein) from bacillus subtilis

Phyre2

PDB 3l7y chain A

3D model

Region: 2 - 262
Aligned: 258
Modelled: 261
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein smu.1108c;
PDBTitle: the crystal structure of smu.1108c from streptococcus mutans ua159

Phyre2

PDB 3mpo chain D

3D model

Region: 2 - 238
Aligned: 226
Modelled: 237
Confidence: 100.0%
Identity: 23%
PDB header:hydrolase
Chain: D: PDB Molecule:predicted hydrolase of the had superfamily;
PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis

Phyre2

PDB 1s2o chain A domain 1

3D model

Region: 1 - 261
Aligned: 232
Modelled: 234
Confidence: 100.0%
Identity: 22%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 1wr8 chain A

3D model

Region: 2 - 263
Aligned: 224
Modelled: 228
Confidence: 100.0%
Identity: 15%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 1l6r chain A

3D model

Region: 1 - 262
Aligned: 222
Modelled: 228
Confidence: 100.0%
Identity: 19%
Fold: HAD-like
Superfamily: HAD-like
Family: Predicted hydrolases Cof

Phyre2

PDB 2i55 chain C

3D model

Region: 2 - 243
Aligned: 232
Modelled: 242
Confidence: 100.0%
Identity: 19%
PDB header:isomerase
Chain: C: PDB Molecule:phosphomannomutase;
PDBTitle: complex of glucose-1,6-bisphosphate with phosphomannomutase from2 leishmania mexicana

Phyre2
1

c3dnpA_
2

c3niwA_
3

d1nrwa_
4

d1nf2a_
5

c3pgvB_
6

d1rlma_
7

c3fzqA_
8

c2qyhD_
9

c3daoB_
10

d2rbka1
11

d2b30a1
12

d1rkqa_
13

c3r4cA_
14

c3gygA_
15

c3l7yA_
16

c3mpoD_
17

d1s2oa1
18

d1wr8a_
19

d1l6ra_
20

c2i55C_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3dnpA_



100.0 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:stress response protein yhax;
PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis
2c3niwA_



100.0 21 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase from2 bacteroides thetaiotaomicron
3d1nrwa_



100.0 22 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
4d1nf2a_



100.0 22 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
5c3pgvB_



100.0 34 PDB header:hydrolase
Chain: B: PDB Molecule:haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution
6d1rlma_



100.0 18 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
7c3fzqA_



100.0 18 PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution
8c2qyhD_



100.0 21 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical conserved protein, gk1056;
PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426
9c3daoB_



100.0 20 PDB header:hydrolase
Chain: B: PDB Molecule:putative phosphatse;
PDBTitle: crystal structure of a putative phosphatse (eubrec_1417) from2 eubacterium rectale at 1.80 a resolution
10d2rbka1



100.0 17 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
11d2b30a1



100.0 19 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
12d1rkqa_



100.0 24 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
13c3r4cA_



100.0 21 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like hydrolase;
PDBTitle: divergence of structure and function among phosphatases of the2 haloalkanoate (had) enzyme superfamily: analysis of bt1666 from3 bacteroides thetaiotaomicron
14c3gygA_



100.0 14 PDB header:hydrolase
Chain: A: PDB Molecule:ntd biosynthesis operon putative hydrolase ntdb;
PDBTitle: crystal structure of yhjk (haloacid dehalogenase-like hydrolase2 protein) from bacillus subtilis
15c3l7yA_



100.0 17 PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein smu.1108c;
PDBTitle: the crystal structure of smu.1108c from streptococcus mutans ua159
16c3mpoD_



100.0 23 PDB header:hydrolase
Chain: D: PDB Molecule:predicted hydrolase of the had superfamily;
PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis
17d1s2oa1



100.0 22 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
18d1wr8a_



100.0 15 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
19d1l6ra_



100.0 19 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
20c2i55C_



100.0 19 PDB header:isomerase
Chain: C: PDB Molecule:phosphomannomutase;
PDBTitle: complex of glucose-1,6-bisphosphate with phosphomannomutase from2 leishmania mexicana
21d1wzca1



not modelled 100.0 16 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
22d1xvia_



not modelled 100.0 16 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
23c1xviA_



not modelled 100.0 16 PDB header:hydrolase
Chain: A: PDB Molecule:putative mannosyl-3-phosphoglycerate phosphatase;
PDBTitle: crystal structure of yedp, phosphatase-like domain protein2 from escherichia coli k12
24d1u02a_



not modelled 100.0 17 Fold:HAD-like
Superfamily:HAD-like
Family:Trehalose-phosphatase
25d2amya1



not modelled 100.0 20 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
26d2fuea1



not modelled 100.0 18 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
27d1k1ea_



not modelled 99.9 29 Fold:HAD-like
Superfamily:HAD-like
Family:Probable phosphatase YrbI
28c3e8mD_



not modelled 99.9 27 PDB header:transferase
Chain: D: PDB Molecule:acylneuraminate cytidylyltransferase;
PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily
29c3mmzA_



not modelled 99.9 25 PDB header:hydrolase
Chain: A: PDB Molecule:putative had family hydrolase;
PDBTitle: crystal structure of putative had family hydrolase from streptomyces2 avermitilis ma-4680
30c3n1uA_



not modelled 99.9 32 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, had superfamily, subfamily iii a;
PDBTitle: structure of putative had superfamily (subfamily iii a) hydrolase from2 legionella pneumophila
31c3mn1B_



not modelled 99.9 28 PDB header:hydrolase
Chain: B: PDB Molecule:probable yrbi family phosphatase;
PDBTitle: crystal structure of probable yrbi family phosphatase from pseudomonas2 syringae pv.phaseolica 1448a
32c2r8zC_



not modelled 99.9 20 PDB header:hydrolase
Chain: C: PDB Molecule:3-deoxy-d-manno-octulosonate 8-phosphate phosphatase;
PDBTitle: crystal structure of yrbi phosphatase from escherichia coli in complex2 with a phosphate and a calcium ion
33c3ewiB_



not modelled 99.9 28 PDB header:transferase
Chain: B: PDB Molecule:n-acylneuraminate cytidylyltransferase;
PDBTitle: structural analysis of the c-terminal domain of murine cmp-2 sialic acid synthetase
34c3n07B_



not modelled 99.9 24 PDB header:hydrolase
Chain: B: PDB Molecule:3-deoxy-d-manno-octulosonate 8-phosphate phosphatase;
PDBTitle: structure of putative 3-deoxy-d-manno-octulosonate 8-phosphate2 phosphatase from vibrio cholerae
35c2p9jH_



not modelled 99.9 21 PDB header:structural genomics, unknown function
Chain: H: PDB Molecule:hypothetical protein aq2171;
PDBTitle: crystal structure of aq2171 from aquifex aeolicus
36c3p96A_



not modelled 99.9 21 PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase serb;
PDBTitle: crystal structure of phosphoserine phosphatase serb from mycobacterium2 avium, native form
37c3n28A_



not modelled 99.9 18 PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase;
PDBTitle: crystal structure of probable phosphoserine phosphatase from vibrio2 cholerae, unliganded form
38d1j97a_



not modelled 99.8 27 Fold:HAD-like
Superfamily:HAD-like
Family:Phosphoserine phosphatase
39c2hx1D_



not modelled 99.8 12 PDB header:hydrolase
Chain: D: PDB Molecule:predicted sugar phosphatases of the had
PDBTitle: crystal structure of possible sugar phosphatase, had2 superfamily (zp_00311070.1) from cytophaga hutchinsonii3 atcc 33406 at 2.10 a resolution
40d1rkua_



not modelled 99.8 13 Fold:HAD-like
Superfamily:HAD-like
Family:Homoserine kinase ThrH
41c2cftA_



not modelled 99.8 13 PDB header:phosphatase
Chain: A: PDB Molecule:pyridoxal phosphate phosphatase;
PDBTitle: crystal structure of human pyridoxal 5'-phosphate2 phosphatase with its substrate
42c3m1yA_



not modelled 99.8 33 PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase (serb);
PDBTitle: crystal structure of a phosphoserine phosphatase (serb) from2 helicobacter pylori
43c3fvvA_



not modelled 99.8 13 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of the protein with unknown function from2 bordetella pertussis tohama i
44d1yv9a1



not modelled 99.7 13 Fold:HAD-like
Superfamily:HAD-like
Family:NagD-like
45c3pdwA_



not modelled 99.7 13 PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized hydrolase yutf;
PDBTitle: crystal structure of putative p-nitrophenyl phosphatase from bacillus2 subtilis
46d1nnla_



not modelled 99.6 21 Fold:HAD-like
Superfamily:HAD-like
Family:Phosphoserine phosphatase
47d1wvia_



not modelled 99.6 12 Fold:HAD-like
Superfamily:HAD-like
Family:NagD-like
48c3kd3A_



not modelled 99.6 18 PDB header:unknown function
Chain: A: PDB Molecule:phosphoserine phosphohydrolase-like protein;
PDBTitle: crystal structure of a phosphoserine phosphohydrolase-like protein2 from francisella tularensis subsp. tularensis schu s4
49d1ydfa1



not modelled 99.6 16 Fold:HAD-like
Superfamily:HAD-like
Family:NagD-like
50d1ys9a1



not modelled 99.6 14 Fold:HAD-like
Superfamily:HAD-like
Family:NagD-like
51d1y8aa1



not modelled 99.5 15 Fold:HAD-like
Superfamily:HAD-like
Family:AF1437-like
52d2c4na1



not modelled 99.4 12 Fold:HAD-like
Superfamily:HAD-like
Family:NagD-like
53d1wpga2



not modelled 99.4 16 Fold:HAD-like
Superfamily:HAD-like
Family:Meta-cation ATPase, catalytic domain P
54c1zjjA_



not modelled 99.4 14 PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein ph1952;
PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3
55c2iyeC_



not modelled 99.4 15 PDB header:hydrolase
Chain: C: PDB Molecule:copper-transporting atpase;
PDBTitle: structure of catalytic cpx-atpase domain copb-b
56c3qgmC_



not modelled 99.3 13 PDB header:hydrolase
Chain: C: PDB Molecule:p-nitrophenyl phosphatase (pho2);
PDBTitle: p-nitrophenyl phosphatase from archaeoglobus fulgidus
57d2feaa1



not modelled 99.3 14 Fold:HAD-like
Superfamily:HAD-like
Family:MtnX-like
58d1vjra_



not modelled 99.2 14 Fold:HAD-like
Superfamily:HAD-like
Family:NagD-like
59d1zs9a1



not modelled 99.2 16 Fold:HAD-like
Superfamily:HAD-like
Family:Enolase-phosphatase E1
60c3rfuC_



not modelled 99.1 20 PDB header:hydrolase, membrane protein
Chain: C: PDB Molecule:copper efflux atpase;
PDBTitle: crystal structure of a copper-transporting pib-type atpase
61c3b9bA_



not modelled 99.1 15 PDB header:hydrolase
Chain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium
PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase
62c3j08A_



not modelled 99.0 23 PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
63c3l8hC_



not modelled 99.0 18 PDB header:hydrolase
Chain: C: PDB Molecule:putative haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of d,d-heptose 1.7-bisphosphate phosphatase from b.2 bronchiseptica complexed with magnesium and phosphate
64c3j09A_



not modelled 99.0 31 PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
65c1mhsA_



not modelled 99.0 22 PDB header:membrane protein, proton transport
Chain: A: PDB Molecule:plasma membrane atpase;
PDBTitle: model of neurospora crassa proton atpase
66c2zxeA_



not modelled 99.0 21 PDB header:hydrolase/transport protein
Chain: A: PDB Molecule:na, k-atpase alpha subunit;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
67d2b8ea1



not modelled 98.9 31 Fold:HAD-like
Superfamily:HAD-like
Family:Meta-cation ATPase, catalytic domain P
68d2gmwa1



not modelled 98.9 18 Fold:HAD-like
Superfamily:HAD-like
Family:Histidinol phosphatase-like
69c3mc1A_



not modelled 98.9 22 PDB header:hydrolase
Chain: A: PDB Molecule:predicted phosphatase, had family;
PDBTitle: crystal structure of a predicted phosphatase from2 clostridium acetobutylicum
70d1u7pa_



not modelled 98.9 27 Fold:HAD-like
Superfamily:HAD-like
Family:Magnesium-dependent phosphatase-1, Mdp1
71c3esqA_



not modelled 98.9 18 PDB header:hydrolase
Chain: A: PDB Molecule:d,d-heptose 1,7-bisphosphate phosphatase;
PDBTitle: crystal structure of calcium-bound d,d-heptose 1.7-2 bisphosphate phosphatase from e. coli
72c2pibA_



not modelled 98.9 15 PDB header:hydrolase
Chain: A: PDB Molecule:phosphorylated carbohydrates phosphatase tm_1254;
PDBTitle: crystal structure of putative beta-phosphoglucomutase from2 thermotoga maritima
73c3b8eC_



not modelled 98.9 15 PDB header:hydrolase/transport protein
Chain: C: PDB Molecule:sodium/potassium-transporting atpase subunit
PDBTitle: crystal structure of the sodium-potassium pump
74c3b8cB_



not modelled 98.8 17 PDB header:hydrolase
Chain: B: PDB Molecule:atpase 2, plasma membrane-type;
PDBTitle: crystal structure of a plasma membrane proton pump
75d1cr6a1



not modelled 98.8 22 Fold:HAD-like
Superfamily:HAD-like
Family:YihX-like
76c3ixzA_



not modelled 98.8 12 PDB header:hydrolase
Chain: A: PDB Molecule:potassium-transporting atpase alpha;
PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride
77c3iruA_



not modelled 98.8 22 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phoshonoacetaldehyde hydrolase like protein;
PDBTitle: crystal structure of phoshonoacetaldehyde hydrolase like protein from2 oleispira antarctica
78c3m9lA_



not modelled 98.8 21 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family;
PDBTitle: crystal structure of probable had family hydrolase from2 pseudomonas fluorescens pf-5
79c1cr6A_



not modelled 98.7 18 PDB header:hydrolase
Chain: A: PDB Molecule:epoxide hydrolase;
PDBTitle: crystal structure of murine soluble epoxide hydrolase2 complexed with cpu inhibitor
80c2ho4A_



not modelled 98.7 15 PDB header:hydrolase
Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain
PDBTitle: crystal structure of protein from mouse mm.236127
81c3d6jA_



not modelled 98.7 27 PDB header:hydrolase
Chain: A: PDB Molecule:putative haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 from bacteroides fragilis
82d1xpja_



not modelled 98.7 17 Fold:HAD-like
Superfamily:HAD-like
Family:Hypothetical protein VC0232
83d2o2xa1



not modelled 98.7 22 Fold:HAD-like
Superfamily:HAD-like
Family:Histidinol phosphatase-like
84d2obba1



not modelled 98.6 22 Fold:HAD-like
Superfamily:HAD-like
Family:BT0820-like
85d1zd3a1



not modelled 98.6 19 Fold:HAD-like
Superfamily:HAD-like
Family:YihX-like
86c2b8eB_



not modelled 98.6 28 PDB header:membrane protein
Chain: B: PDB Molecule:cation-transporting atpase;
PDBTitle: copa atp binding domain
87c3dv9A_



not modelled 98.6 20 PDB header:isomerase
Chain: A: PDB Molecule:beta-phosphoglucomutase;
PDBTitle: putative beta-phosphoglucomutase from bacteroides vulgatus.
88d2hsza1



not modelled 98.6 31 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
89d2fpwa1



not modelled 98.6 20 Fold:HAD-like
Superfamily:HAD-like
Family:Histidinol phosphatase-like
90d1qq5a_



not modelled 98.5 19 Fold:HAD-like
Superfamily:HAD-like
Family:HAD-related
91d1o08a_



not modelled 98.5 9 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
92c3kzxA_



not modelled 98.4 14 PDB header:hydrolase
Chain: A: PDB Molecule:had-superfamily hydrolase, subfamily ia, variant 1;
PDBTitle: crystal structure of a had-superfamily hydrolase from ehrlichia2 chaffeensis at 1.9a resolution
93d2fdra1



not modelled 98.4 13 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
94c2hi0B_



not modelled 98.4 12 PDB header:hydrolase
Chain: B: PDB Molecule:putative phosphoglycolate phosphatase;
PDBTitle: crystal structure of putative phosphoglycolate phosphatase2 (yp_619066.1) from lactobacillus delbrueckii subsp. bulgaricus atcc3 baa-365 at 1.51 a resolution
95d1swva_



not modelled 98.4 26 Fold:HAD-like
Superfamily:HAD-like
Family:Phosphonoacetaldehyde hydrolase-like
96c3nuqA_



not modelled 98.4 27 PDB header:hydrolase
Chain: A: PDB Molecule:putative nucleotide phosphatase;
PDBTitle: structure of a putative nucleotide phosphatase from saccharomyces2 cerevisiae
97c3s6jC_



not modelled 98.4 26 PDB header:hydrolase
Chain: C: PDB Molecule:hydrolase, haloacid dehalogenase-like family;
PDBTitle: the crystal structure of a hydrolase from pseudomonas syringae
98c3nasA_



not modelled 98.4 27 PDB header:isomerase
Chain: A: PDB Molecule:beta-phosphoglucomutase;
PDBTitle: the crystal structure of beta-phosphoglucomutase from bacillus2 subtilis
99d1te2a_



not modelled 98.4 23 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
100d1x42a1



not modelled 98.4 12 Fold:HAD-like
Superfamily:HAD-like
Family:HAD-related
101c3ddhA_



not modelled 98.4 32 PDB header:hydrolase
Chain: A: PDB Molecule:putative haloacid dehalogenase-like family hydrolase;
PDBTitle: the structure of a putative haloacid dehalogenase-like family2 hydrolase from bacteroides thetaiotaomicron vpi-5482
102d2fi1a1



not modelled 98.4 22 Fold:HAD-like
Superfamily:HAD-like
Family:Phosphonoacetaldehyde hydrolase-like
103c2hoqA_



not modelled 98.4 13 PDB header:hydrolase
Chain: A: PDB Molecule:putative had-hydrolase ph1655;
PDBTitle: crystal structure of the probable haloacid dehalogenase (ph1655) from2 pyrococcus horikoshii ot3
104d2hcfa1



not modelled 98.3 13 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
105c2yy6B_



not modelled 98.3 32 PDB header:hydrolase
Chain: B: PDB Molecule:phosphoglycolate phosphatase;
PDBTitle: crystal structure of the phosphoglycolate phosphatase from aquifex2 aeolicus vf5
106d1zrna_



not modelled 98.2 22 Fold:HAD-like
Superfamily:HAD-like
Family:HAD-related
107d2go7a1



not modelled 98.2 28 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
108d2vkqa1



not modelled 98.2 28 Fold:HAD-like
Superfamily:HAD-like
Family:Pyrimidine 5'-nucleotidase (UMPH-1)
109d1ltqa1



not modelled 98.1 19 Fold:HAD-like
Superfamily:HAD-like
Family:phosphatase domain of polynucleotide kinase
110d2ah5a1



not modelled 98.1 19 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
111c2w11B_



not modelled 98.0 13 PDB header:hydrolase
Chain: B: PDB Molecule:2-haloalkanoic acid dehalogenase;
PDBTitle: structure of the l-2-haloacid dehalogenase from sulfolobus2 tokodaii
112c3e58A_



not modelled 98.0 16 PDB header:isomerase
Chain: A: PDB Molecule:putative beta-phosphoglucomutase;
PDBTitle: crystal structure of putative beta-phosphoglucomutase from2 streptococcus thermophilus
113c3cnhA_



not modelled 98.0 16 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase family protein;
PDBTitle: crystal structure of predicted hydrolase of haloacid dehalogenase-like2 superfamily (np_295428.1) from deinococcus radiodurans at 1.66 a3 resolution
114c3l5kA_



not modelled 98.0 22 PDB header:hydrolase
Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain-
PDBTitle: the crystal structure of human haloacid dehalogenase-like2 hydrolase domain containing 1a (hdhd1a)
115c2om6A_



not modelled 98.0 12 PDB header:hydrolase
Chain: A: PDB Molecule:probable phosphoserine phosphatase;
PDBTitle: hypothetical protein (probable phosphoserine phosph (ph0253) from2 pyrococcus horikoshii ot3
116d2hdoa1



not modelled 98.0 22 Fold:HAD-like
Superfamily:HAD-like
Family:beta-Phosphoglucomutase-like
117c2i6xA_



not modelled 98.0 15 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family;
PDBTitle: the structure of a predicted had-like family hydrolase from2 porphyromonas gingivalis.
118c3qnmA_



not modelled 98.0 13 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase;
PDBTitle: haloalkane dehalogenase family member from bacteroides2 thetaiotaomicron of unknown function
119c2pkeA_



not modelled 97.9 11 PDB header:hydrolase
Chain: A: PDB Molecule:haloacid delahogenase-like family hydrolase;
PDBTitle: crystal structure of haloacid delahogenase-like family hydrolase2 (np_639141.1) from xanthomonas campestris at 1.81 a resolution
120c3ib6B_



not modelled 97.8 20 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0