Email l.a.kelley@imperial.ac.uk Description P07017 Date Thu Jan 5 11:00:02 GMT 2012 Unique Job ID e43c6b1d80074314

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1qu7A_ 99.9 84 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor 2 c2ch7A_ 99.7 21 PDB header:chemotaxis Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima 3 c3g67A_ 99.5 21 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima 4 c2d4uA_ 98.3 34 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: crystal structure of the ligand binding domain of the bacterial serine2 chemoreceptor tsr 5 c3lnrA_ 98.1 12 PDB header:signaling protein Chain: A: PDB Molecule:aerotaxis transducer aer2; PDBTitle: crystal structure of poly-hamp domains from the p. aeruginosa soluble2 receptor aer2 6 d2asra_ 98.0 99 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 7 d2liga_ 98.0 69 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 8 d1vlta_ 97.5 70 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 9 d2asxa1 97.0 27 Fold:HAMP domain-like Superfamily:HAMP domain-like Family:HAMP domain 10 c2rm8A_ 96.7 19 PDB header:signaling protein Chain: A: PDB Molecule:sensory rhodopsin ii transducer; PDBTitle: the solution structure of phototactic transducer protein2 htrii linker region from natronomonas pharaonis 11 c1sj8A_ 94.9 9 PDB header:structural protein Chain: A: PDB Molecule:talin 1; PDBTitle: crystal structure of talin residues 482-789 12 c3zrwB_ 94.3 19 PDB header:signaling protein Chain: B: PDB Molecule:af1503 protein, osmolarity sensor protein envz; PDBTitle: the structure of the dimeric hamp-dhp fusion a291v mutant 13 c2wpqA_ 93.0 12 PDB header:membrane protein Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment; PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion) 14 c3ojaB_ 80.6 12 PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex 15 c3dyjA_ 72.5 9 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: crystal structure a talin rod fragment 16 c2kbbA_ 64.8 12 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: nmr structure of the talin rod domain, 1655-1822 17 c1deqO_ 61.7 16 PDB header: PDB COMPND: 18 c2qihA_ 56.6 12 PDB header:cell adhesion Chain: A: PDB Molecule:protein uspa1; PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis 19 c3hd7A_ 53.6 26 PDB header:exocytosis Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1 20 c1ei3E_ 52.3 16 PDB header: PDB COMPND: 21 c1urqA_ not modelled 52.1 21 PDB header:transport protein Chain: A: PDB Molecule:m-tomosyn isoform; PDBTitle: crystal structure of neuronal q-snares in complex with2 r-snare motif of tomosyn 22 c3b5nF_ not modelled 48.2 12 PDB header:membrane protein Chain: F: PDB Molecule:protein sso1; PDBTitle: structure of the yeast plasma membrane snare complex 23 c3ipdB_ not modelled 46.6 13 PDB header:exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21 24 c1sfcJ_ not modelled 44.8 13 PDB header:transport protein Chain: J: PDB Molecule:protein (syntaxin 1a); PDBTitle: neuronal synaptic fusion complex 25 c1n7sB_ not modelled 42.6 15 PDB header:transport protein Chain: B: PDB Molecule:syntaxin 1a; PDBTitle: high resolution structure of a truncated neuronal snare2 complex 26 c1ei3C_ not modelled 41.6 6 PDB header: PDB COMPND: 27 c1deqF_ not modelled 40.2 5 PDB header: PDB COMPND: 28 c2ieqC_ not modelled 37.7 14 PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein 29 c1n7sA_ not modelled 37.1 25 PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: high resolution structure of a truncated neuronal snare2 complex 30 c3ghgK_ not modelled 36.9 15 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 31 c2npsA_ not modelled 35.4 25 PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 4; PDBTitle: crystal structure of the early endosomal snare complex 32 c2vs0B_ not modelled 33.5 13 PDB header:cell invasion Chain: B: PDB Molecule:virulence factor esxa; PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa 33 c2kseA_ not modelled 33.5 13 PDB header:transferase Chain: A: PDB Molecule:sensor protein qsec; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor qsec, center for structures of3 membrane proteins (csmp) target 4311c 34 c2npsB_ not modelled 33.5 16 PDB header:transport protein Chain: B: PDB Molecule:syntaxin 13; PDBTitle: crystal structure of the early endosomal snare complex 35 c3b5nE_ not modelled 32.5 15 PDB header:membrane protein Chain: E: PDB Molecule:synaptobrevin homolog 1; PDBTitle: structure of the yeast plasma membrane snare complex 36 c1sfcI_ not modelled 30.4 26 PDB header:transport protein Chain: I: PDB Molecule:protein (synaptobrevin 2); PDBTitle: neuronal synaptic fusion complex 37 c2efrB_ not modelled 27.5 13 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 38 c1i49A_ not modelled 25.0 13 PDB header:signaling protein Chain: A: PDB Molecule:arfaptin 2; PDBTitle: crystal structure analysis of arfaptin 39 c1gl2A_ not modelled 22.4 13 PDB header:membrane protein Chain: A: PDB Molecule:endobrevin; PDBTitle: crystal structure of an endosomal snare core complex 40 c1m1jA_ not modelled 21.4 6 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha subunit; PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands 41 c3gvmA_ not modelled 18.4 11 PDB header:viral protein Chain: A: PDB Molecule:putative uncharacterized protein sag1039; PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae 42 c2bezC_ not modelled 17.3 16 PDB header:viral protein Chain: C: PDB Molecule:e2 glycoprotein; PDBTitle: structure of a proteolitically resistant core from the2 severe acute respiratory syndrome coronavirus s2 fusion3 protein 43 c1l4aD_ not modelled 17.1 7 PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:s-snap25 fusion protein; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei 44 c3arcl_ not modelled 16.8 35 PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 45 c2npsD_ not modelled 16.2 5 PDB header:transport protein Chain: D: PDB Molecule:syntaxin-6; PDBTitle: crystal structure of the early endosomal snare complex 46 c1sfcD_ not modelled 15.7 10 PDB header:transport protein Chain: D: PDB Molecule:protein (snap-25b); PDBTitle: neuronal synaptic fusion complex 47 c3cwgA_ not modelled 15.4 9 PDB header:transcription Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: unphosphorylated mouse stat3 core fragment 48 c1nafA_ not modelled 15.4 15 PDB header:signaling protein, membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain 49 c1kmiZ_ not modelled 15.3 7 PDB header:signaling protein Chain: Z: PDB Molecule:chemotaxis protein chez; PDBTitle: crystal structure of an e.coli chemotaxis protein, chez 50 d1ez3a_ not modelled 14.8 12 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 51 c2d3eD_ not modelled 14.5 8 PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin 52 c2d4yA_ not modelled 14.1 9 PDB header:structural protein Chain: A: PDB Molecule:flagellar hook-associated protein 1; PDBTitle: crystal structure of a 49k fragment of hap1 (flgk) 53 c3prrL_ not modelled 13.7 35 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer 54 c3kziL_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii 55 c3prqL_ not modelled 13.7 35 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer 56 c1s5lL_ not modelled 13.7 35 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 57 c3bz1L_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer 58 d2axtl1 not modelled 13.7 35 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein L, PsbL Family:PsbL-like 59 c3bz2L_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer 60 c3a0hL_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 61 c3a0bl_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 62 c3a0bL_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex 63 c1s5ll_ not modelled 13.7 35 PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 64 c3arcL_ not modelled 13.7 35 PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 65 c3a0hl_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex 66 c2axtL_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 67 c2axtl_ not modelled 13.7 35 PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 68 c1l7cA_ not modelled 13.4 13 PDB header:cell adhesion Chain: A: PDB Molecule:alpha e-catenin; PDBTitle: alpha-catenin fragment, residues 385-651 69 c1s94A_ not modelled 13.0 11 PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:s-syntaxin; PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei 70 d1s94a_ not modelled 13.0 11 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 71 c1zvaA_ not modelled 12.9 10 PDB header:viral protein Chain: A: PDB Molecule:e2 glycoprotein; PDBTitle: a structure-based mechanism of sars virus membrane fusion 72 c3ok8A_ not modelled 12.4 8 PDB header:protein binding Chain: A: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein PDBTitle: i-bar of pinkbar 73 d1i4da_ not modelled 12.2 13 Fold:BAR/IMD domain-like Superfamily:BAR/IMD domain-like Family:Arfaptin, Rac-binding fragment 74 d1eq1a_ not modelled 11.9 9 Fold:Apolipophorin-III Superfamily:Apolipophorin-III Family:Apolipophorin-III 75 d1r0da_ not modelled 10.7 11 Fold:I/LWEQ domain Superfamily:I/LWEQ domain Family:I/LWEQ domain 76 c3dtpA_ not modelled 10.6 18 PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map 77 c1eboE_ not modelled 10.2 18 PDB header:viral protein Chain: E: PDB Molecule:ebola virus envelope protein chimera consisting PDBTitle: crystal structure of the ebola virus membrane-fusion2 subunit, gp2, from the envelope glycoprotein ectodomain 78 c3b5nL_ not modelled 10.2 11 PDB header:membrane protein Chain: L: PDB Molecule:protein transport protein sec9; PDBTitle: structure of the yeast plasma membrane snare complex 79 c1gl2D_ not modelled 10.2 25 PDB header:membrane protein Chain: D: PDB Molecule:syntaxin 8; PDBTitle: crystal structure of an endosomal snare core complex 80 c3c98B_ not modelled 10.1 10 PDB header:endocytosis/exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: revised structure of the munc18a-syntaxin1 complex 81 c1l4aC_ not modelled 10.1 7 PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:s-snap25 fusion protein; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei 82 c3gxvD_ not modelled 10.0 15 PDB header:hydrolase/replication Chain: D: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase 83 c2dnxA_ not modelled 9.8 9 PDB header:transport protein Chain: A: PDB Molecule:syntaxin-12; PDBTitle: solution structure of rsgi ruh-063, an n-terminal domain of2 syntaxin 12 from human cdna 84 c3gxvC_ not modelled 9.6 15 PDB header:hydrolase/replication Chain: C: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase 85 d1oxza_ not modelled 9.5 15 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 86 c1oxzA_ not modelled 9.5 15 PDB header:membrane protein Chain: A: PDB Molecule:adp-ribosylation factor binding protein gga1; PDBTitle: crystal structure of the human gga1 gat domain 87 c1wyyB_ not modelled 9.2 16 PDB header:viral protein Chain: B: PDB Molecule:e2 glycoprotein; PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein 88 d1wr6a1 not modelled 9.1 9 Fold:Spectrin repeat-like Superfamily:GAT-like domain Family:GAT domain 89 c2l9uA_ not modelled 9.1 13 PDB header:membrane protein Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: spatial structure of dimeric erbb3 transmembrane domain 90 c1junB_ not modelled 9.0 25 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 91 d1t01a1 not modelled 8.9 12 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 92 c1n73C_ not modelled 8.9 15 PDB header:blood clotting Chain: C: PDB Molecule:fibrin gamma chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide 93 c1zv8I_ not modelled 8.9 7 PDB header:viral protein Chain: I: PDB Molecule:e2 glycoprotein; PDBTitle: a structure-based mechanism of sars virus membrane fusion 94 d1lvfa_ not modelled 8.8 15 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 95 c1ciiA_ not modelled 8.6 12 PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia 96 c3hnwB_ not modelled 8.5 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 97 c2qrxA_ not modelled 8.4 9 PDB header:dna binding protein Chain: A: PDB Molecule:gm27569p; PDBTitle: crystal structure of drosophila melanogaster translin2 protein 98 c2l16A_ not modelled 8.2 14 PDB header:protein transport Chain: A: PDB Molecule:sec-independent protein translocase protein tatad; PDBTitle: solution structure of bacillus subtilits tatad protein in dpc micelles 99 c1y4cA_ not modelled 8.1 10 PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp