Email l.a.kelley@imperial.ac.uk Description P0AFY8 Date Thu Jan 5 11:27:35 GMT 2012 Unique Job ID de3944eb7b8ae70c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3fmtF_ 100.0 100 PDB header:replication inhibitor/dna Chain: F: PDB Molecule:protein seqa; PDBTitle: crystal structure of seqa bound to dna 2 d1j3ea_ 100.0 98 Fold:Replication modulator SeqA, C-terminal DNA-binding domain Superfamily:Replication modulator SeqA, C-terminal DNA-binding domain Family:Replication modulator SeqA, C-terminal DNA-binding domain 3 d1xrxa1 99.7 94 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:SeqA N-terminal domain-like 4 c1xrxD_ 99.7 94 PDB header:replication inhibitor Chain: D: PDB Molecule:seqa protein; PDBTitle: crystal structure of a dna-binding protein 5 d3djba1 52.4 13 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 6 c2oq2B_ 32.9 18 PDB header:oxidoreductase Chain: B: PDB Molecule:phosphoadenosine phosphosulfate reductase; PDBTitle: crystal structure of yeast paps reductase with pap, a product complex 7 d2qgsa1 28.5 13 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 8 c2hnkC_ 26.3 17 PDB header:transferase Chain: C: PDB Molecule:sam-dependent o-methyltransferase; PDBTitle: crystal structure of sam-dependent o-methyltransferase from2 pathogenic bacterium leptospira interrogans 9 c2o0cB_ 22.4 23 PDB header:signaling protein Chain: B: PDB Molecule:alr2278 protein; PDBTitle: crystal structure of the h-nox domain from nostoc sp. pcc 71202 complexed to no 10 d2byfa1 21.8 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 11 c2kilA_ 21.6 15 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: nmr structure of the h103g mutant so2144 h-nox domain from2 shewanella oneidensis in the fe(ii)co ligation state 12 c2ragB_ 21.1 15 PDB header:hydrolase Chain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus 13 d1qbjc_ 21.0 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Z-DNA binding domain 14 d2gxba1 20.4 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Z-DNA binding domain 15 d1u55a_ 20.2 27 Fold:Ligand-binding domain in the NO signalling and Golgi transport Superfamily:Ligand-binding domain in the NO signalling and Golgi transport Family:H-NOX domain 16 c2i5gB_ 18.7 20 PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal strcuture of amidohydrolase from pseudomonas2 aeruginosa 17 d1p9oa_ 18.1 13 Fold:Ribokinase-like Superfamily:CoaB-like Family:CoaB-like 18 d1qgpa_ 17.7 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Z-DNA binding domain 19 c2l9bA_ 16.1 18 PDB header:transcription Chain: A: PDB Molecule:mrna 3'-end-processing protein rna15; PDBTitle: heterodimer between rna14p monkeytail domain and rna15p hinge domain2 of the yeast cf ia complex 20 c1bm4A_ 15.9 40 PDB header:viral protein Chain: A: PDB Molecule:protein (moloney murine leukemia virus capsid); PDBTitle: momlv capsid protein major homology region peptide analog 21 d1wxaa1 not modelled 15.3 17 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 22 d1hlva2 not modelled 14.9 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 23 c3kc2A_ not modelled 14.1 21 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein ykr070w; PDBTitle: crystal structure of mitochondrial had-like phosphatase from2 saccharomyces cerevisiae 24 c2k7qA_ not modelled 13.6 50 PDB header:structural protein Chain: A: PDB Molecule:filamin-a; PDBTitle: filamin a ig-like domains 18-19 25 c3fdgA_ not modelled 13.3 14 PDB header:hydrolase Chain: A: PDB Molecule:dipeptidase ac. metallo peptidase. merops family m19; PDBTitle: the crystal structure of the dipeptidase ac, metallo peptidase. merops2 family m19 26 d2ev0a2 not modelled 13.2 20 Fold:Iron-dependent repressor protein, dimerization domain Superfamily:Iron-dependent repressor protein, dimerization domain Family:Iron-dependent repressor protein, dimerization domain 27 d2isya2 not modelled 12.7 19 Fold:Iron-dependent repressor protein, dimerization domain Superfamily:Iron-dependent repressor protein, dimerization domain Family:Iron-dependent repressor protein, dimerization domain 28 d1uura2 not modelled 12.5 50 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:STAT DNA-binding domain 29 c2hjmB_ not modelled 12.5 33 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein pf1176; PDBTitle: crystal structure of a singleton protein pf1176 from p. furiosus 30 d1itua_ not modelled 12.3 0 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:Renal dipeptidase 31 d2c5lc1 not modelled 11.4 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 32 c3itcA_ not modelled 11.3 3 PDB header:hydrolase Chain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol 33 c3ec8A_ not modelled 11.1 17 PDB header:cell adhesion Chain: A: PDB Molecule:putative uncharacterized protein flj10324; PDBTitle: the crystal structure of the ra domain of flj10324 (radil) 34 c3jszA_ not modelled 10.9 33 PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: legionella pneumophila glucosyltransferase lgt1 n293a with udp-glc 35 d1mp1a_ not modelled 10.9 12 Fold:PWI domain Superfamily:PWI domain Family:PWI domain 36 c1fe6D_ not modelled 10.6 50 PDB header:protein binding Chain: D: PDB Molecule:tetrabrachion; PDBTitle: crystal structure of a naturally occuring parallel right-2 handed coiled-coil tetramer 37 c2x48B_ not modelled 10.6 22 PDB header:viral protein Chain: B: PDB Molecule:cag38821; PDBTitle: orf 55 from sulfolobus islandicus rudivirus 1 38 c2jpfA_ not modelled 9.9 18 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical protein; PDBTitle: bpp3783_115-220 39 d2pq7a1 not modelled 9.7 13 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 40 d2dmca1 not modelled 9.4 27 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 41 c1ksrA_ not modelled 9.2 31 PDB header:actin binding protein Chain: A: PDB Molecule:gelation factor; PDBTitle: the repeating segments of the f-actin cross-linking2 gelation factor (abp-120) have an immunoglobulin fold, nmr,3 20 structures 42 d1pzxa_ not modelled 9.0 10 Fold:DAK1/DegV-like Superfamily:DAK1/DegV-like Family:DegV-like 43 c3lu2B_ not modelled 8.9 11 PDB header:hydrolase Chain: B: PDB Molecule:lmo2462 protein; PDBTitle: structure of lmo2462, a listeria monocytogenes amidohydrolase family2 putative dipeptidase 44 d3dtoa1 not modelled 8.4 11 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 45 d1ho8a_ not modelled 8.2 11 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Regulatory subunit H of the V-type ATPase 46 c1mv4B_ not modelled 8.1 55 PDB header:de novo protein Chain: B: PDB Molecule:tropomyosin 1 alpha chain; PDBTitle: tm9a251-284: a peptide model of the c-terminus of a rat2 striated alpha tropomyosin 47 d2hh8a1 not modelled 8.0 28 Fold:YdfO-like Superfamily:YdfO-like Family:YdfO-like 48 c1icfB_ not modelled 7.8 30 PDB header:hydrolase Chain: B: PDB Molecule:protein (cathepsin l: light chain); PDBTitle: crystal structure of mhc class ii associated p41 ii fragment in2 complex with cathepsin l 49 c3b40A_ not modelled 7.7 10 PDB header:hydrolase Chain: A: PDB Molecule:probable dipeptidase; PDBTitle: crystal structure of the probable dipeptidase pvdm from2 pseudomonas aeruginosa 50 d2di9a1 not modelled 7.5 40 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 51 c1v0dA_ not modelled 7.1 31 PDB header:hydrolase Chain: A: PDB Molecule:dna fragmentation factor 40 kda subunit; PDBTitle: crystal structure of caspase-activated dnase (cad) 52 d1v0da_ not modelled 7.1 31 Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:Caspase-activated DNase, CAD (DffB, DFF40) 53 d1nj1a2 not modelled 7.0 27 Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS 54 c2e9jA_ not modelled 6.8 23 PDB header:structural protein Chain: A: PDB Molecule:filamin-b; PDBTitle: solution structure of the 14th filamin domain from human2 filamin-b 55 c2v9pH_ not modelled 6.7 15 PDB header:hydrolase Chain: H: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 dna-free form 56 c2dchX_ not modelled 6.7 36 PDB header:hydrolase Chain: X: PDB Molecule:putative homing endonuclease; PDBTitle: crystal structure of archaeal intron-encoded homing endonuclease i-2 tsp061i 57 d1dpua_ not modelled 6.6 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of RPA32 58 c1dpuA_ not modelled 6.6 13 PDB header:dna binding protein Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88) 59 c2qupA_ not modelled 6.6 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bh1478 protein; PDBTitle: crystal structure of uncharacterized protein bh1478 from bacillus2 halodurans 60 c2j3sB_ not modelled 6.6 36 PDB header:structural protein Chain: B: PDB Molecule:filamin-a; PDBTitle: crystal structure of the human filamin a ig domains 19 to2 21 61 c1dzlA_ not modelled 6.5 15 PDB header:virus Chain: A: PDB Molecule:late major capsid protein l1; PDBTitle: l1 protein of human papillomavirus 16 62 d1dzla_ not modelled 6.5 15 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Group I dsDNA viruses Family:Papovaviridae-like VP 63 c3n92A_ not modelled 6.5 22 PDB header:transferase Chain: A: PDB Molecule:alpha-amylase, gh57 family; PDBTitle: crystal structure of tk1436, a gh57 branching enzyme from2 hyperthermophilic archaeon thermococcus kodakaraensis, in complex3 with glucose 64 c2eqrA_ not modelled 6.2 8 PDB header:transcription Chain: A: PDB Molecule:nuclear receptor corepressor 1; PDBTitle: solution structure of the first sant domain from human2 nuclear receptor corepressor 1 65 d1jb0d_ not modelled 6.2 31 Fold:Photosystem I subunit PsaD Superfamily:Photosystem I subunit PsaD Family:Photosystem I subunit PsaD 66 c2eayB_ not modelled 6.1 22 PDB header:ligase Chain: B: PDB Molecule:biotin [acetyl-coa-carboxylase] ligase; PDBTitle: crystal structure of biotin protein ligase from aquifex2 aeolicus 67 c2htuA_ not modelled 6.1 35 PDB header:hydrolase Chain: A: PDB Molecule:neuraminidase; PDBTitle: n8 neuraminidase in complex with peramivir 68 d1cuka1 not modelled 6.1 7 Fold:RuvA C-terminal domain-like Superfamily:DNA helicase RuvA subunit, C-terminal domain Family:DNA helicase RuvA subunit, C-terminal domain 69 d2hq7a1 not modelled 5.8 18 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 70 c3h87D_ not modelled 5.7 23 PDB header:toxin/antitoxin Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis 71 c2gxaA_ not modelled 5.7 15 PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp 72 c3salB_ not modelled 5.6 29 PDB header:hydrolase Chain: B: PDB Molecule:neuraminidase; PDBTitle: crystal structure of influenza a virus neuraminidase n5 73 c2bkxB_ not modelled 5.5 29 PDB header:hydrolase Chain: B: PDB Molecule:glucosamine-6-phosphate deaminase; PDBTitle: structure and kinetics of a monomeric glucosamine-6-2 phosphate deaminase: missing link of the nagb superfamily 74 d2cpwa1 not modelled 5.4 29 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 75 d1hc7a3 not modelled 5.4 50 Fold:IF3-like Superfamily:C-terminal domain of ProRS Family:C-terminal domain of ProRS 76 c3r3hA_ not modelled 5.3 31 PDB header:transferase Chain: A: PDB Molecule:o-methyltransferase, sam-dependent; PDBTitle: crystal structure of o-methyltransferase from legionella pneumophila 77 c2vgqA_ not modelled 5.3 20 PDB header:immune system/transport Chain: A: PDB Molecule:maltose-binding periplasmic protein, PDBTitle: crystal structure of human ips-1 card 78 d1f5ta2 not modelled 5.2 11 Fold:Iron-dependent repressor protein, dimerization domain Superfamily:Iron-dependent repressor protein, dimerization domain Family:Iron-dependent repressor protein, dimerization domain 79 c1lnsA_ not modelled 5.1 13 PDB header:hydrolase Chain: A: PDB Molecule:x-prolyl dipeptidyl aminopetidase; PDBTitle: crystal structure analysis of the x-prolyl dipeptidyl2 aminopeptidase from lactococcus lactis 80 d1zpsa1 not modelled 5.1 21 Fold:HisI-like Superfamily:HisI-like Family:HisI-like 81 c1z23A_ not modelled 5.1 14 PDB header:cell adhesion Chain: A: PDB Molecule:crk-associated substrate; PDBTitle: the serine-rich domain from crk-associated substrate2 (p130cas) 82 d2vl8a1 not modelled 5.1 100 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Glycosylating toxin catalytic domain-like 83 d2a9ua1 not modelled 5.0 19 Fold:alpha-alpha superhelix Superfamily:USP8 N-terminal domain-like Family:USP8 N-terminal domain-like