Fold library entry viewer: c1lnsA_

Added to library: Tue Mar 16 12:57:09 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	F	N	H	F	S	I	V	D	K	N	F	D	E	Q	L	A	E	L	D	Q	L	G	F	R	W	S	V	F	W	D	E	K	K	I	L	K	D	F	L	I	Q	S	P	S	D	M	T	A	L	Q	A	T	A	E	L	D	V	I	E	F	L	K	S	S	I	E	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																		T					T	T	S												T	S	S	S		G	G	G		B		S	S	S		B							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	E	I	F	W	N	I	A	L	Q	L	L	D	F	V	P	N	F	D	F	E	I	G	K	A	F	E	Y	A	K	N	S	N	L	P	Q	I	E	A	E	M	T	T	E	N	I	I	S	A	F	Y	Y	L	L	C	T	R	R	K	T	G	M	I	L	V	E	H	W	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			B	T	T	T	B		T	T									T	T						S																	S	B		T	T	S	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	G	L	L	P	L	D	N	H	Y	H	F	F	N	D	K	S	L	A	T	F	D	S	S	L	L	E	R	E	V	L	W	V	E	S	P	V	D	S	E	Q	R	G	E	N	D	L	I	K	I	Q	I	I	R	P	K	S	T	E	K	L	P	V	V	M	T	A	S	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S				S	S					T	T				S		S		G	G	G											S			T	T		S	S	S														S	S										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	L	G	I	N	D	K	A	N	D	L	A	L	H	D	M	N	V	E	L	E	E	K	T	S	H	E	I	H	V	E	Q	K	L	P	Q	K	L	S	A	K	A	K	E	L	P	I	V	D	K	A	P	Y	R	F	T	H	G	W	T	Y	S	L	N	D	Y	F	L	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																							S																								S	S		S		B															T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	F	A	S	I	Y	V	A	G	V	G	T	R	S	S	D	G	F	Q	T	S	G	D	Y	Q	Q	I	Y	S	M	T	A	V	I	D	W	L	N	G	R	A	R	A	Y	T	S	R	K	K	T	H	E	I	K	A	S	W	A	N	G	K	V	A	M	T	G	K	S	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T	S	T	T	S		S				T	T	S															T	T	S	S				S	S	T	T								T	T											T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	T	M	A	Y	G	A	A	T	T	G	V	E	G	L	E	L	I	L	A	E	A	G	I	S	S	W	Y	N	Y	Y	R	E	N	G	L	V	R	S	P	G	G	F	P	G	E	D	L	D	V	L	A	A	L	T	Y	S	R	N	L	D	G	A	D	F	L	K	G	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T		T	T								S			S	B						B	S	S	S	S	B				T	T		T	T												G	G	G	G	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	Y	E	K	R	L	A	E	M	T	A	A	L	D	R	K	S	G	D	Y	N	Q	F	W	H	D	R	N	Y	L	I	N	T	D	K	V	K	A	D	V	L	I	V	H	G	L	Q	D	W	N	V	T	P	E	Q	A	Y	N	F	W	K	A	L	P	E	G	H	A	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T									T	T	B	G	G	G	G	G	G	G			S								T	T			S	S		T										S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	F	L	H	R	G	A	H	I	Y	M	N	S	W	Q	S	I	D	F	S	E	T	I	N	A	Y	F	V	A	K	L	L	D	R	D	L	N	L	N	L	P	P	V	I	L	Q	E	N	S	K	D	Q	V	W	T	M	M	N	D	F	G	A	N	T	Q	I	K	L	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S	S				T	T	B	S	S																T	T									S						T	T	S	S	S						S		S	S		S							S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	K	T	A	V	S	F	A	Q	F	D	N	N	Y	D	D	E	T	F	K	K	Y	S	K	D	F	N	V	F	K	K	D	L	F	E	N	K	A	N	E	A	V	I	D	L	E	L	P	S	M	L	T	I	N	G	P	V	E	L	E	L	R	L	K	L	N	D	T	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S							S																							T	T		S	S									S	S																	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	L	S	A	Q	I	L	D	F	G	Q	K	K	R	L	E	D	K	V	R	V	K	D	F	K	V	L	D	R	G	R	N	F	M	L	D	D	L	V	E	L	P	L	V	E	S	P	Y	Q	L	V	T	K	G	F	T	N	L	Q	N	Q	S	L	L	T	V	S	D	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S											S	S	S	S		S																								T	T				T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
Sequence	A	D	E	W	F	T	I	K	F	E	L	Q	P	T	I	Y	H	L	E	K	A	D	K	L	R	V	I	L	Y	S	T	D	F	E	H	T	V	R	D	N	R	K	V	T	Y	E	I	D	L	S	Q	S	K	L	I	I	P	I	E	S	V	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																		T	T									S			T	T	T	S													G	G	G							B			T	T

Download:

PDB structure

FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus Interactive 3D view in JSmol Phyre is now FREE for commercial users! All images and data generated by Phyre2 are free to use in any publication with acknowledgement Accessibility Statement Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960   © Structural Bioinformatics Group, Imperial College, London Michael Sternberg   Disclaimer Terms and Conditions Phyre2 is part of Genome3D