Fold library entry viewer: d2vl8a1

Added to library: Tue Mar 16 12:29:25 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	L	V	N	K	A	Q	L	Q	K	M	A	Y	V	K	F	R	I	Q	E	D	E	Y	V	A	I	L	N	A	L	E	E	Y	H	N	M	S	E	S	S	V	V	E	K	Y	L	K	L	K	D	I	N	N	L	T	D	N	Y	L	N	T	Y	K	K	S	G	R	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T			T	T																			T		T	T	S																								S	S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	K	K	F	K	E	Y	L	T	M	E	V	L	E	L	K	N	N	S	L	T	P	V	E	K	N	L	H	F	I	W	I	G	G	Q	I	N	D	T	A	I	N	Y	I	N	Q	W	K	D	V	N	S	D	Y	T	V	K	V	F	Y	D	S	N	A	F	L	I	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T							S								S	S																		T	T	S								T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	K	K	T	I	V	E	S	A	T	N	N	T	L	E	S	F	R	E	N	L	N	D	P	E	F	D	Y	N	K	F	Y	R	K	R	M	E	I	I	Y	D	K	Q	K	H	F	I	D	Y	Y	K	S	Q	I	E	E	N	P	E	F	I	I	D	N	I	I	K	T	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T	T		S	S	S	S	S																																	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	N	E	Y	S	K	D	L	E	A	L	N	K	Y	I	E	E	S	L	N	K	I	T	A	N	N	G	N	D	I	R	N	L	E	K	F	A	D	E	D	L	V	R	L	Y	N	Q	E	L	V	E	R	W	N	L	A	A	A	S	D	I	L	R	I	S	M	L	K	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																				T	T	T				T	T	T			T	T															T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	G	V	Y	L	D	V	D	M	L	P	G	I	Q	P	D	L	F	K	S	I	N	K	P	D	S	I	T	N	T	S	W	E	M	I	K	L	E	A	I	M	K	Y	K	E	Y	I	P	G	Y	T	S	K	N	F	D	M	L	D	E	E	V	Q	R	S	F	E	S	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		B			B		T	T	T	S	T	T	S				T	T	S																			S	S	T	T				T	T	G	G	G	S												T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	S	K	S	D	K	S	E	I	F	L	P	L	D	D	I	K	V	S	P	L	E	V	K	I	A	F	A	N	N	S	V	I	N	Q	A	L	I	S	L	K	D	S	Y	C	S	D	L	V	I	N	Q	I	K	N	R	Y	K	I	L	N	D	N	L	N	P	S	I	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S			S	G	G	G	T	B										T	T								T	T											T	T																												S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	T	D	F	N	T	T	M	K	I	F	S	D	K	L	A	S	I	S	N	E	D	N	M	M	F	M	I	K	I	T	N	Y	L	K	V	G	F	A	P	D	V	R	S	T	I	N	L	S	G	P	G	V	Y	T	G	A	Y	Q	D	L	L	M	F	K	D	N	S	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S																		T	T	T								T	T	G	G	G	T	T	T	S	S	S			T	G	G	G	T	T	S														T		S				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Sequence	I	H	L	L	E	P	E	L	R	N	F	E	F	P	K	T	K	I	S	Q	L	T	E	Q	E	I	T	S	L	W	S	A	R	A	K	S	Q	F	E	E	Y	K	K	G	Y	F	E	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	B			G	G	G		B										T															T	T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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