Emaill.a.kelley@imperial.ac.uk
DescriptionP0ADH5
DateThu Jan 5 11:21:00 GMT 2012
Unique Job IDb49799f6ef732900

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3nkhB_



100.0 25 PDB header:recombination
Chain: B: PDB Molecule:integrase;
PDBTitle: crystal structure of integrase from mrsa strain staphylococcus aureus
2d1a0pa2



100.0 20 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
3d1aiha_



99.9 18 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
4d1f44a2



99.9 13 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
5d1ae9a_



99.9 14 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
6c1z1bA_



99.9 18 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:integrase;
PDBTitle: crystal structure of a lambda integrase dimer bound to a2 coc' core site
7c1a0pA_



99.9 19 PDB header:dna recombination
Chain: A: PDB Molecule:site-specific recombinase xerd;
PDBTitle: site-specific recombinase, xerd
8d1p7da_



99.9 13 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
9c1ma7A_



99.8 15 PDB header:hydrolase, ligase/dna
Chain: A: PDB Molecule:cre recombinase;
PDBTitle: crystal structure of cre site-specific recombinase2 complexed with a mutant dna substrate, loxp-a8/t27
10c1crxA_



99.8 12 PDB header:replication/dna
Chain: A: PDB Molecule:cre recombinase;
PDBTitle: cre recombinase/dna complex reaction intermediate i
11d5crxb2



99.8 15 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Lambda integrase-like, catalytic core
12c2a3vA_



99.8 28 PDB header:recombination
Chain: A: PDB Molecule:site-specific recombinase inti4;
PDBTitle: structural basis for broad dna-specificity in integron2 recombination
13c2v6eB_



97.6 13 PDB header:hydrolase
Chain: B: PDB Molecule:protelemorase;
PDBTitle: protelomerase telk complexed with substrate dna
14c2f4qA_



95.0 15 PDB header:isomerase
Chain: A: PDB Molecule:type i topoisomerase, putative;
PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib
15c2h7fX_



89.4 20 PDB header:isomerase/dna
Chain: X: PDB Molecule:dna topoisomerase 1;
PDBTitle: structure of variola topoisomerase covalently bound to dna
16d1rr8c1



53.4 19 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core
17c2b9sA_



52.0 14 PDB header:isomerase/dna
Chain: A: PDB Molecule:topoisomerase i-like protein;
PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex
18d1khda1



49.2 24 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
19d1k4ta2



44.2 15 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core
20d1uoua1



42.0 16 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
21d2tpta1



not modelled 41.9 12 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
22d1v8ga1



not modelled 40.7 20 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
23d2cqra1



not modelled 32.8 12 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain
24d1brwa1



not modelled 29.4 20 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
25d1a41a_



not modelled 29.2 20 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core
26d1f43a_



not modelled 28.4 8 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
27c2j0fC_



not modelled 24.8 16 PDB header:transferase
Chain: C: PDB Molecule:thymidine phosphorylase;
PDBTitle: structural basis for non-competitive product inhibition in2 human thymidine phosphorylase: implication for drug design
28c2kt0A_



not modelled 23.4 11 PDB header:transcription regulation
Chain: A: PDB Molecule:homeobox protein nanog;
PDBTitle: solution structure of human stem cell transcription factor nanog2 homeodomain fragment
29c3h5qA_



not modelled 22.6 14 PDB header:transferase
Chain: A: PDB Molecule:pyrimidine-nucleoside phosphorylase;
PDBTitle: crystal structure of a putative pyrimidine-nucleoside phosphorylase2 from staphylococcus aureus
30c2dsjA_



not modelled 20.7 12 PDB header:transferase
Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase;
PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8
31c1otpA_



not modelled 20.5 16 PDB header:phosphorylase
Chain: A: PDB Molecule:thymidine phosphorylase;
PDBTitle: structural and theoretical studies suggest domain movement produces an2 active conformation of thymidine phosphorylase
32d1o17a1



not modelled 20.3 24 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
33d1vnda_



not modelled 20.1 10 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
34c1brwB_



not modelled 18.1 18 PDB header:transferase
Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase);
PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation
35d1pufa_



not modelled 17.9 14 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
36c2dmsA_



not modelled 17.2 8 PDB header:dna binding protein
Chain: A: PDB Molecule:homeobox protein otx2;
PDBTitle: solution structure of the homeobox domain of homeobox2 protein otx2
37c2bpqB_



not modelled 17.1 14 PDB header:transferase
Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: anthranilate phosphoribosyltransferase (trpd) from2 mycobacterium tuberculosis (apo structure)
38d1trra_



not modelled 16.8 13 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Trp repressor, TrpR
39d1hdpa_



not modelled 15.9 16 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
40c1a31A_



not modelled 15.7 18 PDB header:isomerase/dna
Chain: A: PDB Molecule:protein (topoisomerase i);
PDBTitle: human reconstituted dna topoisomerase i in covalent complex2 with a 22 base pair dna duplex
41c2l9rA_



not modelled 15.3 7 PDB header:transcription
Chain: A: PDB Molecule:homeobox protein nkx-3.1;
PDBTitle: solution nmr structure of homeobox domain of homeobox protein nkx-3.12 from homo sapiens, northeast structural genomics consortium target3 hr6470a
42c1vquB_



not modelled 14.9 16 PDB header:transferase
Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase 2;
PDBTitle: crystal structure of anthranilate phosphoribosyltransferase 22 (17130499) from nostoc sp. at 1.85 a resolution
43d1jhga_



not modelled 14.8 13 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Trp repressor, TrpR
44d1xc5a1



not modelled 14.6 24 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Myb/SANT domain
45c2djnA_



not modelled 14.5 13 PDB header:transcription
Chain: A: PDB Molecule:homeobox protein dlx-5;
PDBTitle: the solution structure of the homeobox domain of human2 homeobox protein dlx-5
46d1fjlb_



not modelled 13.5 14 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
47c2dmuA_



not modelled 13.3 13 PDB header:dna binding protein
Chain: A: PDB Molecule:homeobox protein goosecoid;
PDBTitle: solution structure of the homeobox domain of homeobox2 protein goosecoid
48c1khdD_



not modelled 12.9 23 PDB header:transferase
Chain: D: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: crystal structure analysis of the anthranilate2 phosphoribosyltransferase from erwinia carotovora at 1.93 resolution (current name, pectobacterium carotovorum)
49d1ocpa_



not modelled 12.5 17 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
50c2dmtA_



not modelled 12.4 18 PDB header:dna binding protein
Chain: A: PDB Molecule:homeobox protein barh-like 1;
PDBTitle: solution structure of the homeobox domain of homeobox2 protein barh-like 1
51c1v8gB_



not modelled 12.3 20 PDB header:transferase
Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: crystal structure of anthranilate phosphoribosyltransferase2 (trpd) from thermus thermophilus hb8
52c2da3A_



not modelled 11.6 19 PDB header:transcription
Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein;
PDBTitle: solution structure of the third homeobox domain of at-2 binding transcription factor 1 (atbf1)
53d1ig7a_



not modelled 10.3 9 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
54d1cc5a_



not modelled 10.1 8 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
55d1ztra1



not modelled 9.9 11 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
56d1fjla_



not modelled 9.8 13 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
57d2elca1



not modelled 9.8 22 Fold:Methionine synthase domain-like
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
58d1gt0c1



not modelled 9.6 15 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
59c3mzyA_



not modelled 9.3 13 PDB header:rna binding protein
Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
60d2e1oa1



not modelled 9.3 9 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
61c2f9jP_



not modelled 9.2 14 PDB header:rna binding protein
Chain: P: PDB Molecule:splicing factor 3b subunit 1;
PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155
62c1o17A_



not modelled 9.0 25 PDB header:transferase
Chain: A: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: anthranilate phosphoribosyl-transferase (trpd)
63d1gefa_



not modelled 9.0 13 Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Hjc-like
64d1bw5a_



not modelled 8.8 15 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
65c2wj0B_



not modelled 8.5 25 PDB header:hydrolase/dna
Chain: B: PDB Molecule:archaeal hjc;
PDBTitle: crystal structures of holliday junction resolvases from2 archaeoglobus fulgidus bound to dna substrate
66c2juhA_



not modelled 8.5 11 PDB header:nuclear protein
Chain: A: PDB Molecule:telomere binding protein tbp1;
PDBTitle: solution structure of dna binding domain of ngtrf1
67c2kq6A_



not modelled 8.4 17 PDB header:transport protein
Chain: A: PDB Molecule:polycystin-2;
PDBTitle: the structure of the ef-hand domain of polycystin-2 suggests a2 mechanism for ca2+-dependent regulation of polycystin-2 channel3 activity
68c2dmqA_



not modelled 8.4 10 PDB header:dna binding protein
Chain: A: PDB Molecule:lim/homeobox protein lhx9;
PDBTitle: solution structure of the homeobox domain of lim/homeobox2 protein lhx9
69c2da2A_



not modelled 8.1 10 PDB header:transcription
Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein;
PDBTitle: solution structure of the second homeobox domain of at-2 binding transcription factor 1 (atbf1)
70c3hugA_



not modelled 8.1 11 PDB header:transcription/membrane protein
Chain: A: PDB Molecule:rna polymerase sigma factor;
PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
71d1ahdp_



not modelled 7.8 11 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
72d1sf9a_



not modelled 7.8 10 Fold:SH3-like barrel
Superfamily:Hypothetical protein YfhH
Family:Hypothetical protein YfhH
73c3hxxA_



not modelled 7.4 26 PDB header:ligase
Chain: A: PDB Molecule:alanyl-trna synthetase;
PDBTitle: crystal structure of catalytic fragment of e. coli alars in complex2 with amppcp
74d1octc1



not modelled 7.4 16 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
75c3a01A_



not modelled 7.1 15 PDB header:gene regulation/dna
Chain: A: PDB Molecule:homeodomain-containing protein;
PDBTitle: crystal structure of aristaless and clawless homeodomains bound to dna
76d1jhfa1



not modelled 7.0 15 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
77d1yz8p1



not modelled 6.9 7 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
78d1h9xa1



not modelled 6.8 11 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase
79d2ecba1



not modelled 6.7 14 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
80d1a56a_



not modelled 6.7 8 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
81d1b8ia_



not modelled 6.6 13 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
82c2x48B_



not modelled 6.4 33 PDB header:viral protein
Chain: B: PDB Molecule:cag38821;
PDBTitle: orf 55 from sulfolobus islandicus rudivirus 1
83d1kx7a_



not modelled 6.4 8 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
84c3sohB_



not modelled 6.4 10 PDB header:motor protein
Chain: B: PDB Molecule:flagellar motor switch protein flig;
PDBTitle: architecture of the flagellar rotor
85d2hddb_



not modelled 6.2 14 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
86d2cuea1



not modelled 6.1 18 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
87c2kleA_



not modelled 6.0 19 PDB header:membrane protein
Chain: A: PDB Molecule:polycystin-2;
PDBTitle: isic refined solution structure of the calcium binding2 domain of the c-terminal cytosolic domain of polycystin-2
88d1zq3p1



not modelled 5.9 18 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
89c2l4dA_



not modelled 5.9 20 PDB header:electron transport
Chain: A: PDB Molecule:sco1/senc family protein/cytochrome c;
PDBTitle: cytochrome c domain of pp3183 protein from pseudomonas putida
90c2o8xA_



not modelled 5.9 8 PDB header:transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc
91c3h0gE_



not modelled 5.9 16 PDB header:transcription
Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
92c2zonG_



not modelled 5.8 0 PDB header:oxidoreductase/electron transport
Chain: G: PDB Molecule:cytochrome c551;
PDBTitle: crystal structure of electron transfer complex of nitrite2 reductase with cytochrome c
93c2d0sA_



not modelled 5.5 15 PDB header:electron transport
Chain: A: PDB Molecule:cytochrome c;
PDBTitle: crystal structure of the cytochrome c552 from moderate2 thermophilic bacterium, hydrogenophilus thermoluteolus
94d1au7a1



not modelled 5.5 7 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
95c3hefB_



not modelled 5.5 13 PDB header:viral protein
Chain: B: PDB Molecule:gene 1 protein;
PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
96d1itya_



not modelled 5.4 22 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:DNA-binding domain of telomeric protein
97d1ob8a_



not modelled 5.3 13 Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Hjc-like
98d1fcdc1



not modelled 5.1 8 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Two-domain cytochrome c
99d2craa1



not modelled 5.1 11 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain