Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	P	I	H	D	K	S	P	R	P	Q	E	F	A	A	V	D	L	G	S	N	S	F	H	M	V	I	A	R	V	V	D	G	A	M	Q	I	I	G	R	L	K	Q	R	V	H	L	A	D	G	L	G	P	D	N	M	L	S	E	E
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?																																											?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	M	T	R	G	L	N	C	L	S	L	F	A	E	R	L	Q	G	F	S	P	A	S	V	C	I	V	G	T	H	T	L	R	Q	A	L	N	A	T	D	F	L	K	R	A	E	K	V	I	P	Y	P	I	E	I	I	S	G	N	E
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		E	A	R	L	I	F	M	G	V	E	H	T	Q	P	E	K	G	R	K	L	V	I	D	I	G	G	G	S	T	E	L	V	I	G	E	N	F	E	P	I	L	V	E	S	R	R	M	G	C	V	S	F	A	Q	L	Y	F	P	G	G
Secondary structure
SS confidence
Disorder																																																											?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		V	I	N	K	E	N	F	Q	R	A	R	M	A	A	A	Q	K	L	E	T	L	T	W	Q	F	R	I	Q	G	W	N	V	A	M	G	A	S	G	T	I	K	A	A	H	E	V	L	M	E	M	G	E	K	D	G	I	I	T	P	E
Secondary structure
SS confidence
Disorder		?	?																																																	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		R	L	E	K	L	V	K	E	V	L	R	H	R	N	F	A	S	L	S	L	P	G	L	S	E	E	R	K	T	V	F	V	P	G	L	A	I	L	C	G	V	F	D	A	L	A	I	R	E	L	R	L	S	D	G	A	L	R	E	G
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		V	L	Y	E	M	E	G	R	F	R	H	Q	D	V	R	S	R	T	A	S	S	L	A	N	Q	Y	H	I	D	S	E	Q	A	R	R	V	L	D	T	T	M	Q	M	Y	E	Q	W	R	E	Q	Q	P	K	L	A	H	P	Q	L	E
Secondary structure
SS confidence
Disorder									?	?	?	?																																										?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		A	L	L	R	W	A	A	M	L	H	E	V	G	L	N	I	N	H	S	G	L	H	R	H	S	A	Y	I	L	Q	N	S	D	L	P	G	F	N	Q	E	Q	Q	L	M	M	A	T	L	V	R	Y	H	R	K	A	I	K	L	D	D
Secondary structure
SS confidence
Disorder																																																						?		?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence		L	P	R	F	T	L	F	K	K	K	Q	F	L	P	L	I	Q	L	L	R	L	G	V	L	L	N	N	Q	R	Q	A	T	T	T	P	P	T	L	T	L	I	T	D	D	S	H	W	T	L	R	F	P	H	D	W	F	S	Q	N	A
Secondary structure
SS confidence
Disorder		?	?	?	?		?	?																					?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Sequence		L	V	L	L	D	L	E	K	E	Q	E	Y	W	E	G	V	A	G	W	R	L	K	I	E	E	E	S	T	P	E	I	A	A
Secondary structure
SS confidence
Disorder																											?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2flo chain A Region: 11 - 506 Aligned: 496 Modelled: 496 Confidence: 100.0% Identity: 97% PDB header:hydrolase Chain: A: PDB Molecule:exopolyphosphatase; PDBTitle: crystal structure of exopolyphosphatase (ppx) from e. coli o157:h7 Phyre2 PDB 3hi0 chain B Region: 11 - 503 Aligned: 467 Modelled: 482 Confidence: 100.0% Identity: 19% PDB header:hydrolase Chain: B: PDB Molecule:putative exopolyphosphatase; PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution Phyre2 PDB 3cer chain D Region: 8 - 308 Aligned: 301 Modelled: 301 Confidence: 100.0% Identity: 22% PDB header:structural genomics, unknown function Chain: D: PDB Molecule:possible exopolyphosphatase-like protein; PDBTitle: crystal structure of the exopolyphosphatase-like protein2 q8g5j2. northeast structural genomics consortium target3 blr13 Phyre2 PDB 3mdq chain A Region: 11 - 310 Aligned: 300 Modelled: 300 Confidence: 100.0% Identity: 25% PDB header:hydrolase Chain: A: PDB Molecule:exopolyphosphatase; PDBTitle: crystal structure of an exopolyphosphatase (chu_0316) from cytophaga2 hutchinsonii atcc 33406 at 1.50 a resolution Phyre2 PDB 1t6d chain B Region: 11 - 304 Aligned: 288 Modelled: 293 Confidence: 100.0% Identity: 24% PDB header:hydrolase Chain: B: PDB Molecule:exopolyphosphatase; PDBTitle: miras phasing of the aquifex aeolicus ppx/gppa phosphatase: crystal2 structure of the type ii variant Phyre2 PDB 1u6z chain A domain 1 Region: 313 - 509 Aligned: 197 Modelled: 197 Confidence: 100.0% Identity: 100% Fold: HD-domain/PDEase-like Superfamily: HD-domain/PDEase-like Family: Ppx associated domain Phyre2 PDB 1u6z chain A domain 3 Region: 136 - 312 Aligned: 177 Modelled: 177 Confidence: 100.0% Identity: 100% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: Ppx/GppA phosphatase Phyre2 PDB 1t6c chain A domain 2 Region: 135 - 311 Aligned: 172 Modelled: 177 Confidence: 100.0% Identity: 23% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: Ppx/GppA phosphatase Phyre2 PDB 1u6z chain A domain 2 Region: 12 - 135 Aligned: 124 Modelled: 124 Confidence: 100.0% Identity: 100% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: Ppx/GppA phosphatase Phyre2 PDB 1t6c chain A domain 1 Region: 12 - 133 Aligned: 122 Modelled: 122 Confidence: 100.0% Identity: 25% Fold: Ribonuclease H-like motif Superfamily: Actin-like ATPase domain Family: Ppx/GppA phosphatase Phyre2 PDB 3aap chain A Region: 9 - 288 Aligned: 274 Modelled: 280 Confidence: 99.9% Identity: 16% PDB header:hydrolase Chain: A: PDB Molecule:ectonucleoside triphosphate diphosphohydrolase i; PDBTitle: crystal structure of lp1ntpdase from legionella pneumophila Phyre2 PDB 3zx2 chain A Region: 12 - 288 Aligned: 271 Modelled: 277 Confidence: 99.9% Identity: 15% PDB header:hydrolase Chain: A: PDB Molecule:ectonucleoside triphosphate diphosphohydrolase 1; PDBTitle: ntpdase1 in complex with decavanadate Phyre2 PDB 3cj9 chain A Region: 10 - 288 Aligned: 277 Modelled: 277 Confidence: 99.7% Identity: 16% PDB header:hydrolase Chain: A: PDB Molecule:ectonucleoside triphosphate diphosphohydrolase 2; PDBTitle: structure of rattus norvegicus ntpdase2 in complex with2 calcium, amp and phosphate Phyre2 PDB 3agr chain B Region: 11 - 153 Aligned: 143 Modelled: 143 Confidence: 99.3% Identity: 22% PDB header:hydrolase Chain: B: PDB Molecule:nucleoside triphosphate hydrolase; PDBTitle: crystal structure of nucleoside triphosphate hydrolases from neospora2 caninum Phyre2 PDB 4a5b chain A Region: 11 - 153 Aligned: 143 Modelled: 143 Confidence: 99.3% Identity: 23% PDB header:hydrolase Chain: A: PDB Molecule:nucleoside-triphosphatase 2; PDBTitle: crystal structure of the c258s/c268s variant of toxoplasma gondii2 nucleoside triphosphate diphosphohydrolase 1 (ntpdase1) Phyre2 PDB 3h1q chain B Region: 5 - 221 Aligned: 200 Modelled: 217 Confidence: 99.3% Identity: 12% PDB header:structural protein Chain: B: PDB Molecule:ethanolamine utilization protein eutj; PDBTitle: crystal structure of ethanolamine utilization protein eutj from2 carboxydothermus hydrogenoformans Phyre2 PDB 2ych chain A Region: 8 - 221 Aligned: 204 Modelled: 214 Confidence: 99.0% Identity: 15% PDB header:cell cycle Chain: A: PDB Molecule:competence protein pilm; PDBTitle: pilm-piln type iv pilus biogenesis complex Phyre2 PDB 1e4g chain T Region: 9 - 221 Aligned: 208 Modelled: 213 Confidence: 98.9% Identity: 16% PDB header:bacterial cell division Chain: T: PDB Molecule:cell division protein ftsa; PDBTitle: ftsa (atp-bound form) from thermotoga maritima Phyre2 PDB 3js6 chain A Region: 9 - 251 Aligned: 243 Modelled: 243 Confidence: 98.1% Identity: 14% PDB header:unknown function Chain: A: PDB Molecule:uncharacterized parm protein; PDBTitle: crystal structure of apo psk41 parm protein Phyre2 PDB 1mwm chain A Region: 15 - 229 Aligned: 215 Modelled: 215 Confidence: 98.0% Identity: 17% PDB header:structural protein Chain: A: PDB Molecule:parm; PDBTitle: parm from plasmid r1 adp form Phyre2 1 c2floA_ 2 c3hi0B_ 3 c3cerD_ 4 c3mdqA_ 5 c1t6dB_ 6 d1u6za1 7 d1u6za3 8 d1t6ca2 9 d1u6za2 10 d1t6ca1 11 c3aapA_ 12 c3zx2A_ 13 c3cj9A_ 14 c3agrB_ 15 c4a5bA_ 16 c3h1qB_ 17 c2ychA_ 18 c1e4gT_ 19 c3js6A_ 20 c1mwmA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203