Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2v7yA_

Fold library idPDB HeaderMoleculeTitle
c2v7yA_PDB header: chaperoneChain: A: PDB Molecule: chaperone protein dnak;PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state


Added to library: Tue Mar 16 14:26:57 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNPNTIISIKRH
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)



SSTT


TTS
SS
SSSSSTTTTT
SS
GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MGTDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TTS


TT
TS



TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLV
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTGGGS
S
SS
TTTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAH
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) S

GGG
TTT
STTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGV
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTT

GGG
SSGGGG
SS

B

S
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IAGEVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADN
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) T








B
SSTTT
TT
BSS

SSTT

SSSBGGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence KSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEE
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)





TT
S

TTS
TTT


SS
S

S
 .........500....
Sequence NAEADRKRKEAAEL
Predicted secondary structure


SS confidence













Known secondary structure (DSSP) S
GGGGGGGG




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D