Fold library entry viewer: c2khoA_

Added to library: Sat Aug 28 21:27:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	I	G	I	D	L	G	T	T	N	S	C	V	A	I	M	D	G	T	T	P	R	V	L	E	N	A	E	G	D	R	T	T	P	S	I	I	A	Y	T	Q	D	G	E	T	L	V	G	Q	P	A	K	R	Q	A	V	T	N	P	Q	N	T	L	F	A	I	K	R	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S									T	T								T	T	S		S	S									T	T	S					S					T	T	T	T	T		G	G	G					G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	R	R	F	Q	D	E	E	V	Q	R	D	V	S	I	M	P	F	K	I	I	A	A	D	N	G	D	A	W	V	E	V	K	G	Q	K	M	A	P	P	Q	I	S	A	E	V	L	K	K	M	K	K	T	A	E	D	Y	L	G	E	P	V	T	E	A	V	I	T	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		B	S	S	S	T	T									S	S						T	T	S	B						T	T																										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R	I	A	G	L	E	V	K	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L	D	K	G	T	G	N	R	T	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	I	E	I	D	E	V	D	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T															T	T	T																	T	T	T	T	S	S	S	S											S	S												T	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	T	F	E	V	L	A	T	N	G	D	T	H	L	G	G	E	D	F	D	S	R	L	I	N	Y	L	V	E	E	F	K	K	D	Q	G	I	D	L	R	N	D	P	L	A	M	Q	R	L	K	E	A	A	E	K	A	K	I	E	L	S	S	A	Q	Q	T	D	V	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S		S	G	G	G	T																	S			S	T	T																			T	T	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	Y	I	T	A	D	A	T	G	P	K	H	M	N	I	K	V	T	R	A	K	L	E	S	L	V	E	D	L	V	N	R	S	I	E	P	L	K	V	A	L	Q	D	A	G	L	S	V	S	D	I	D	D	V	I	L	V	G	G	Q	T	R	M	P	M	V	Q	K	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T																T	T			S	T	T	G	G	G	T	S								T	T	T			T	T	T		S						S	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	E	F	F	G	K	E	P	R	K	D	V	N	P	D	E	A	V	A	I	G	A	A	V	Q	G	G	V	L	T	G	D	V	K	D	V	L	L	L	D	V	T	P	L	S	L	G	I	E	T	M	G	G	V	M	T	T	L	I	A	K	N	T	T	I	P	T	K	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			B		S	S		T	T	T											T	T	T	T	T	S							S	B											T	T	T								T	T	B		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	V	F	S	T	A	E	D	N	Q	S	A	V	T	I	H	V	L	Q	G	E	R	K	R	A	A	D	N	K	S	L	G	Q	F	N	L	D	G	I	N	P	A	P	R	G	M	P	Q	I	E	V	T	F	D	I	D	A	D	G	I	L	H	V	S	A	K	D	K	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	T	T											S	S		S	B	G	G	G	S													S			T	T		S										T	T	S									T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	K	E	Q	K	I	T	I	K	A	S	S	G	L	N	E	D	E	I	Q	K	M	V	R	D	A	E	A	N	A	E	A	D	R	K	F	D	E	L	V	Q	T	R	N	Q	G	D	H	L	L	H	S	T	R	K	Q	V	E	E	A	G	D	K	L	P	A	D	D	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S																S																																G	G	G	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Sequence	A	I	E	S	A	L	T	A	L	E	T	A	L	K	G	E	D	K	A	A	I	E	A	K	M	Q	E	L	A	Q	V	S	Q	K	L	M	E	I	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	S														T	T

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PDB structure

FASTA sequence

Hidden Markov model

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