PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3gw7A_

Fold library id	PDB Header	Molecule	Title
c3gw7A_	PDB header: hydrolase	Chain: A: PDB Molecule: uncharacterized protein yedj;	PDBTitle: crystal structure of a metal-dependent phosphohydrolase2 with conserved hd domain (yedj) from escherichia coli in3 complex with nickel ions. northeast structural genomics4 consortium target er63

Links to external resources
Added to library: Sun Aug 29 01:36:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q H W Q A Q F E N W L K N H V C H F R R V W A T A Q K L A A D D D V D M L V I L T A C Y F H D I V S Q R S S I L A A E E T R R L L R E E F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T G G G T T T T T
T T T S
S
T T T T T T
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q F P A E K I E A V C H A I A A H S F S A Q I A P L T T E A K I V Q D A D R L E A L G A I G L A R V F A V S G A L G V A L F D G E D P F A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T T T S T T T G G G S S
T T S
S T G G G G S T T
S G G G G G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H R P L D D Y A L D H F Q T K L L K L P Q T M Q T A R G K Q L A Q H N A H F L V E F M A K L S A E L A G E N E G V D H K V I D A F S S A G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T G G G T T T T
S T T
S S
T T T S
T T

. . . . .

Sequence E H H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	H	W	Q	A	Q	F	E	N	W	L	K	N	H	V	C	H	F	R	R	V	W	A	T	A	Q	K	L	A	A	D	D	D	V	D	M	L	V	I	L	T	A	C	Y	F	H	D	I	V	S	Q	R	S	S	I	L	A	A	E	E	T	R	R	L	L	R	E	E	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	G	G	G	T	T	T	T	T																	T	T	T	S		S		T	T									T	T	T	T				S	S															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	F	P	A	E	K	I	E	A	V	C	H	A	I	A	A	H	S	F	S	A	Q	I	A	P	L	T	T	E	A	K	I	V	Q	D	A	D	R	L	E	A	L	G	A	I	G	L	A	R	V	F	A	V	S	G	A	L	G	V	A	L	F	D	G	E	D	P	F	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		T	T	T	T	T	S	T	T	T	G	G	G	S	S		T	T	S						S										T	G	G	G	G	S															T	T				S	G	G	G	G	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	R	P	L	D	D	Y	A	L	D	H	F	Q	T	K	L	L	K	L	P	Q	T	M	Q	T	A	R	G	K	Q	L	A	Q	H	N	A	H	F	L	V	E	F	M	A	K	L	S	A	E	L	A	G	E	N	E	G	V	D	H	K	V	I	D	A	F	S	S	A	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	T	T	G	G	G	T	T	T	T			S																										T	T			S	S			T	T	T					S		T	T
	.	.	.	.	.
Sequence	E	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)