PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3p4iA_

Fold library id	PDB Header	Molecule	Title
c3p4iA_	PDB header: transferase	Chain: A: PDB Molecule: acetate kinase;	PDBTitle: crystal structure of acetate kinase from mycobacterium avium

Links to external resources
Added to library: Sat Nov 20 08:59:10 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A R R V L V I N S G S S S L K F Q L V D P E S G V A A S T G I V E R I E S S P V P D H D A A L R R A F D M L A G D G V D L N T A G L V A V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T
S
S T T
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H R V V H G G N T F Y R P T V L D D A V I A R L H E L S E L A P L H N P P A L L G I E V A R R L L P G I A H V A V F D T G F F H D L P P A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
S
G G G T T T
T T T
T T S T T G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A T Y A I D R E L A D R W Q I R R Y G F H G T S H R Y V S E Q A A A F L D R P L R G L K Q I V L H L G N G C S A S A I A G T R P L D T S M G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
S
S
T S
G G G
S S S T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L T P L E G L V M G T R S G D I D P S V V S Y L C H T A G M G V D D V E S M L N H R S G V V G L S G V R D F R R L R E L I E S G D G A A Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S S S
S S
S
T
S
S
T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A Y S V F T H R L R K Y I G A Y L A V L G H T D V I S F T A G I G E N D A A V R R D A V S G M E E L G I V L D E R R N L P G A K G A R Q I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
T T
G G G T
B
T T T T
T T
S S
B

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . .

Sequence A D D S P I T V L V V P T N E E L A I A R D C V R V L G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	R	V	L	V	I	N	S	G	S	S	S	L	K	F	Q	L	V	D	P	E	S	G	V	A	A	S	T	G	I	V	E	R	I	E	S	S	P	V	P	D	H	D	A	A	L	R	R	A	F	D	M	L	A	G	D	G	V	D	L	N	T	A	G	L	V	A	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S									T	T	T																S			S															T	T			T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	R	V	V	H	G	G	N	T	F	Y	R	P	T	V	L	D	D	A	V	I	A	R	L	H	E	L	S	E	L	A	P	L	H	N	P	P	A	L	L	G	I	E	V	A	R	R	L	L	P	G	I	A	H	V	A	V	F	D	T	G	F	F	H	D	L	P	P	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			T	T	T			S													G	G	G	T	T	T		T	T	T																T	T	S							T	T	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	Y	A	I	D	R	E	L	A	D	R	W	Q	I	R	R	Y	G	F	H	G	T	S	H	R	Y	V	S	E	Q	A	A	A	F	L	D	R	P	L	R	G	L	K	Q	I	V	L	H	L	G	N	G	C	S	A	S	A	I	A	G	T	R	P	L	D	T	S	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S									T		S				S																	T	S		G	G	G									S	S	S								T	T						S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	T	P	L	E	G	L	V	M	G	T	R	S	G	D	I	D	P	S	V	V	S	Y	L	C	H	T	A	G	M	G	V	D	D	V	E	S	M	L	N	H	R	S	G	V	V	G	L	S	G	V	R	D	F	R	R	L	R	E	L	I	E	S	G	D	G	A	A	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	S	S	S			S	S				S			T																								S								S				T									T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	Y	S	V	F	T	H	R	L	R	K	Y	I	G	A	Y	L	A	V	L	G	H	T	D	V	I	S	F	T	A	G	I	G	E	N	D	A	A	V	R	R	D	A	V	S	G	M	E	E	L	G	I	V	L	D	E	R	R	N	L	P	G	A	K	G	A	R	Q	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S												T	T										T	T		G	G	G	T			B		T	T	T	T		T	T			S	S				B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Sequence	A	D	D	S	P	I	T	V	L	V	V	P	T	N	E	E	L	A	I	A	R	D	C	V	R	V	L	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S	S																					T	T