Email l.a.kelley@imperial.ac.uk Description P0ABY7 Date Thu Jan 5 11:16:42 GMT 2012 Unique Job ID 7d2e382eb99dba87

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2avue1 100.0 100 Fold:FlhC-like Superfamily:FlhC-like Family:FlhC-like 2 c2avuF_ 100.0 100 PDB header:transcription activator Chain: F: PDB Molecule:flagellar transcriptional activator flhc; PDBTitle: structure of the escherichia coli flhdc complex, a2 prokaryotic heteromeric regulator of transcription 3 c1ee8A_ 88.8 26 PDB header:dna binding protein Chain: A: PDB Molecule:mutm (fpg) protein; PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8 4 c1k82D_ 86.8 31 PDB header:hydrolase/dna Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna 5 c1zgwA_ 86.3 24 PDB header:transcription regulator/dna Chain: A: PDB Molecule:ada polyprotein; PDBTitle: nmr structure of e. coli ada protein in complex with dna 6 c1nnjA_ 85.1 27 PDB header:hydrolase Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna 7 c2opfA_ 84.7 23 PDB header:hydrolase/dna Chain: A: PDB Molecule:endonuclease viii; PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate 8 d1ee8a3 82.0 24 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 9 c2f5qA_ 81.4 27 PDB header:hydrolase/dna Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase; PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2 10 d1tdza3 79.2 27 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 11 d1r2za3 78.7 27 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 12 d1k82a3 78.5 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 13 d1l1ta3 78.4 27 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 14 d1k3xa3 78.3 23 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 15 c3eg9B_ 75.3 21 PDB header:protein transport Chain: B: PDB Molecule:sec24 related gene family, member d; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin 16 c3eh2B_ 72.5 24 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24c; PDBTitle: crystal structure of the human copii-coat protein sec24c 17 c3a46B_ 72.5 7 PDB header:hydrolase Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of mvnei1/thf complex 18 c1pd0A_ 71.7 16 PDB header:transport protein Chain: A: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the copii coat subunit, sec24,2 complexed with a peptide from the snare protein sed53 (yeast syntaxin-5) 19 c1m2vB_ 71.1 15 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the yeast sec23/24 heterodimer 20 c2hr5B_ 65.6 21 PDB header:metal binding protein Chain: B: PDB Molecule:rubrerythrin; PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form 21 c3iz6X_ 63.4 15 PDB header:ribosome Chain: X: PDB Molecule:40s ribosomal protein s27 (s27e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 22 d2akla2 not modelled 63.3 19 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:PhnA zinc-binding domain 23 c1m2oA_ not modelled 62.9 20 PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex 24 d1qxfa_ 62.9 13 Fold:Rubredoxin-like Superfamily:Zn-binding ribosomal proteins Family:Ribosomal protein S27e 25 c3izbX_ not modelled 62.2 20 PDB header:ribosome Chain: X: PDB Molecule:40s ribosomal protein rps27 (s27e); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 26 c2aklA_ not modelled 60.9 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phna-like protein pa0128; PDBTitle: solution structure for phn-a like protein pa0128 from2 pseudomonas aeruginosa 27 c2x48B_ not modelled 56.5 21 PDB header:viral protein Chain: B: PDB Molecule:cag38821; PDBTitle: orf 55 from sulfolobus islandicus rudivirus 1 28 c1dvbA_ not modelled 52.7 24 PDB header:electron transport Chain: A: PDB Molecule:rubrerythrin; PDBTitle: rubrerythrin 29 c2kn9A_ not modelled 51.0 17 PDB header:electron transport Chain: A: PDB Molecule:rubredoxin; PDBTitle: solution structure of zinc-substituted rubredoxin b (rv3250c) from2 mycobacterium tuberculosis. seattle structural genomics center for3 infectious disease target mytud.01635.a 30 d1bl0a1 not modelled 48.8 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 31 c3a44D_ not modelled 46.0 15 PDB header:metal binding protein Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form 32 c1yuzB_ not modelled 45.4 12 PDB header:oxidoreductase Chain: B: PDB Molecule:nigerythrin; PDBTitle: partially reduced state of nigerythrin 33 d1vdda_ not modelled 45.2 24 Fold:Recombination protein RecR Superfamily:Recombination protein RecR Family:Recombination protein RecR 34 c3rfaA_ not modelled 44.5 23 PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine 35 d2gnra1 not modelled 44.4 27 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:SSO2064-like 36 d2dsxa1 not modelled 43.8 23 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 37 c3egxB_ not modelled 43.6 26 PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23a/24a complexed with the snare protein sec22b and3 bound to the transport signal sequence of the snare protein4 bet1 38 c2kdxA_ not modelled 43.4 14 PDB header:metal-binding protein Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein PDBTitle: solution structure of hypa protein 39 c1vddC_ not modelled 42.9 24 PDB header:recombination Chain: C: PDB Molecule:recombination protein recr; PDBTitle: crystal structure of recombinational repair protein recr 40 d1mm2a_ not modelled 42.1 29 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain 41 d1ywsa1 not modelled 41.8 25 Fold:Rubredoxin-like Superfamily:CSL zinc finger Family:CSL zinc finger 42 c2pptA_ not modelled 40.7 16 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-2; PDBTitle: crystal structure of thioredoxin-2 43 d1pd0a5 not modelled 39.7 14 Fold:Rubredoxin-like Superfamily:Zn-finger domain of Sec23/24 Family:Zn-finger domain of Sec23/24 44 c2xzm6_ not modelled 38.9 10 PDB header:ribosome Chain: 6: PDB Molecule:rps27e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 45 d1dx8a_ not modelled 38.6 20 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 46 d1bl0a2 not modelled 36.7 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 47 d1d5ya1 not modelled 36.1 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 48 d1lkoa2 not modelled 35.8 17 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 49 c2gb5B_ not modelled 35.0 27 PDB header:hydrolase Chain: B: PDB Molecule:nadh pyrophosphatase; PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution 50 d1nnqa2 not modelled 33.5 22 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 51 d1k78a1 not modelled 32.6 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 52 d6rxna_ not modelled 32.3 25 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 53 d4rxna_ not modelled 31.8 25 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 54 d1yuza2 not modelled 31.6 29 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 55 d1u5ka2 not modelled 31.2 16 Fold:ArfGap/RecO-like zinc finger Superfamily:ArfGap/RecO-like zinc finger Family:RecO C-terminal domain-like 56 d1iroa_ not modelled 30.0 25 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 57 c2v3bB_ not modelled 28.1 20 PDB header:oxidoreductase Chain: B: PDB Molecule:rubredoxin 2; PDBTitle: crystal structure of the electron transfer complex2 rubredoxin - rubredoxin reductase from pseudomonas3 aeruginosa. 58 d1olta_ not modelled 28.0 14 Fold:TIM beta/alpha-barrel Superfamily:Radical SAM enzymes Family:Oxygen-independent coproporphyrinogen III oxidase HemN 59 d1wgea1 not modelled 27.9 29 Fold:Rubredoxin-like Superfamily:CSL zinc finger Family:CSL zinc finger 60 d1s24a_ not modelled 27.9 18 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 61 c1s24A_ not modelled 27.9 18 PDB header:electron transport Chain: A: PDB Molecule:rubredoxin 2; PDBTitle: rubredoxin domain ii from pseudomonas oleovorans 62 c1u78A_ not modelled 27.5 12 PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna 63 d2gmga1 not modelled 27.2 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PF0610-like 64 d1wfha_ not modelled 26.5 27 Fold:AN1-like Zinc finger Superfamily:AN1-like Zinc finger Family:AN1-like Zinc finger 65 d1qcva_ not modelled 25.0 13 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 66 d1dl6a_ not modelled 24.9 17 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 67 c3mn2B_ not modelled 24.8 21 PDB header:transcription regulator Chain: B: PDB Molecule:probable arac family transcriptional regulator; PDBTitle: the crystal structure of a probable arac family transcriptional2 regulator from rhodopseudomonas palustris cga009 68 d1wfpa_ not modelled 24.7 32 Fold:AN1-like Zinc finger Superfamily:AN1-like Zinc finger Family:AN1-like Zinc finger 69 d6paxa1 not modelled 24.5 35 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 70 d2rdva_ not modelled 23.7 28 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 71 d1wg2a_ not modelled 23.7 32 Fold:AN1-like Zinc finger Superfamily:AN1-like Zinc finger Family:AN1-like Zinc finger 72 c2js4A_ not modelled 23.3 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0434 protein bb2007; PDBTitle: solution nmr structure of bordetella bronchiseptica protein2 bb2007. northeast structural genomics consortium target3 bor54 73 d1rb9a_ not modelled 23.0 22 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 74 d1iu5a_ not modelled 21.9 22 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 75 d1h7va_ not modelled 21.9 19 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 76 d1wfla_ not modelled 21.7 23 Fold:AN1-like Zinc finger Superfamily:AN1-like Zinc finger Family:AN1-like Zinc finger 77 c1x4iA_ not modelled 21.5 17 PDB header:cell adhesion Chain: A: PDB Molecule:inhibitor of growth protein 3; PDBTitle: solution structure of phd domain in inhibitor of growth2 protein 3 (ing3) 78 d1y02a2 not modelled 21.4 33 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:FYVE, a phosphatidylinositol-3-phosphate binding domain 79 d1twfb_ not modelled 21.2 27 Fold:beta and beta-prime subunits of DNA dependent RNA-polymerase Superfamily:beta and beta-prime subunits of DNA dependent RNA-polymerase Family:RNA-polymerase beta 80 c3lsgD_ not modelled 20.9 33 PDB header:transcription regulator Chain: D: PDB Molecule:two-component response regulator yesn; PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586 81 d1d5ya2 not modelled 19.8 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 82 c1x4wA_ not modelled 19.5 32 PDB header:metal binding protein Chain: A: PDB Molecule:hypothetical protein flj13222; PDBTitle: solution structure of the zf-an1 domain from human2 hypothetical protein flj13222 83 d1z60a1 not modelled 19.5 26 Fold:Cysteine-rich domain Superfamily:Cysteine-rich domain Family:TFIIH p44 subunit cysteine-rich domain 84 d1wffa_ not modelled 19.4 32 Fold:AN1-like Zinc finger Superfamily:AN1-like Zinc finger Family:AN1-like Zinc finger 85 c3mv2A_ not modelled 18.9 8 PDB header:protein transport Chain: A: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of a-cop in complex with e-cop 86 c2pmzB_ not modelled 18.8 22 PDB header:translation, transferase Chain: B: PDB Molecule:dna-directed rna polymerase subunit b; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 87 c2y0fD_ not modelled 18.2 21 PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 88 c3mkrB_ not modelled 18.2 11 PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/epsilon-cop subcomplex of the copi2 vesicular coat 89 c3k7aM_ not modelled 17.8 24 PDB header:transcription Chain: M: PDB Molecule:transcription initiation factor iib; PDBTitle: crystal structure of an rna polymerase ii-tfiib complex 90 d1wiia_ not modelled 17.7 27 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Putative zinc binding domain 91 d2ayja1 not modelled 17.7 11 Fold:Rubredoxin-like Superfamily:Zn-binding ribosomal proteins Family:Ribosomal protein L40e 92 d1brfa_ not modelled 17.7 28 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 93 d2eppa1 not modelled 17.1 20 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 94 c2adrA_ not modelled 16.9 36 PDB header:transcription regulation Chain: A: PDB Molecule:adr1; PDBTitle: adr1 dna-binding domain from saccharomyces cerevisiae, nmr,2 25 structures 95 c3mklB_ not modelled 16.6 15 PDB header:transcription regulator Chain: B: PDB Molecule:hth-type transcriptional regulator gadx; PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12 96 c2yrcA_ not modelled 16.6 23 PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: solution structure of the zf-sec23_sec24 from human sec23a 97 c3c8fA_ not modelled 16.6 10 PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate formate-lyase 1-activating enzyme; PDBTitle: 4fe-4s-pyruvate formate-lyase activating enzyme with2 partially disordered adomet 98 d1mm3a_ not modelled 16.6 28 Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain 99 c2jr6A_ not modelled 16.4 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0434 protein nma0874; PDBTitle: solution structure of upf0434 protein nma0874. northeast structural2 genomics target mr32