Email l.a.kelley@imperial.ac.uk Description P76347 Date Wed Jan 25 15:21:07 GMT 2012 Unique Job ID 7a32c338076c9d60

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1cwvA_ 100.0 23 PDB header:structural protein Chain: A: PDB Molecule:invasin; PDBTitle: crystal structure of invasin: a bacterial integrin-binding protein 2 c1e5uI_ 99.9 23 PDB header:intimin Chain: I: PDB Molecule:intimin; PDBTitle: nmr representative structure of intimin-190 (int190) from2 enteropathogenic e. coli 3 c1f00I_ 99.6 18 PDB header:cell adhesion Chain: I: PDB Molecule:intimin; PDBTitle: crystal structure of c-terminal 282-residue fragment of2 enteropathogenic e. coli intimin 4 d1cwva4 98.8 34 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 5 c2l9yA_ 98.0 14 PDB header:sugar binding protein Chain: A: PDB Molecule:cvnh-lysm lectin; PDBTitle: solution structure of the mocvnh-lysm module from the rice blast2 fungus magnaporthe oryzae protein (mgg_03307) 6 c2djpA_ 98.0 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein sb145; PDBTitle: the solution structure of the lysm domain of human2 hypothetical protein sb145 7 d1e0ga_ 97.8 25 Fold:LysM domain Superfamily:LysM domain Family:LysM domain 8 d1cwva3 97.7 22 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 9 d1cwva2 97.5 23 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 10 d2zfga1 97.5 12 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 11 d1y7ma2 97.5 24 Fold:LysM domain Superfamily:LysM domain Family:LysM domain 12 d1phoa_ 97.3 13 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 13 d1cwva5 97.2 23 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Invasin/intimin cell-adhesion fragment, C-terminal domain 14 c2gu1A_ 97.0 14 PDB header:hydrolase Chain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae 15 c3nb3C_ 96.8 19 PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components 16 c2qomB_ 96.8 11 PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain. 17 c2k0lA_ 96.6 19 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. 18 d1cwva1 96.5 25 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 19 c3aehB_ 96.5 9 PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp 20 d1osma_ 96.4 18 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 21 d1t16a_ not modelled 96.4 13 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Outer membrane protein transport protein 22 c1y7mB_ not modelled 96.4 24 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein bsu14040; PDBTitle: crystal structure of the b. subtilis ykud protein at 2 a2 resolution 23 d1qj8a_ not modelled 96.4 15 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 24 c2x4mD_ not modelled 96.2 12 PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla 25 d1f00i1 96.1 27 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 26 c3qq2C_ not modelled 96.1 12 PDB header:membrane protein/protein transport Chain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka 27 d1qjpa_ not modelled 96.0 19 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 28 c3bryB_ not modelled 96.0 13 PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux 29 c3pdgA_ 95.9 13 PDB header:unknown function Chain: A: PDB Molecule:fibronectin(iii)-like module; PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules 30 c3qraA_ not modelled 95.8 14 PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis 31 c2f1tB_ not modelled 95.8 13 PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw 32 c3kvnA_ not modelled 95.6 10 PDB header:hydrolase Chain: A: PDB Molecule:esterase esta; PDBTitle: crystal structure of the full-length autotransporter esta from2 pseudomonas aeruginosa 33 c2jmmA_ not modelled 95.4 13 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein 34 c3pe9C_ 95.0 15 PDB header:unknown function Chain: C: PDB Molecule:fibronectin(iii)-like module; PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules 35 c3pe9A_ 95.0 15 PDB header:unknown function Chain: A: PDB Molecule:fibronectin(iii)-like module; PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules 36 d1g90a_ not modelled 94.8 16 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 37 c3pddA_ not modelled 94.3 12 PDB header:unknown function Chain: A: PDB Molecule:glycoside hydrolase, family 9; PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules 38 c3pe9D_ not modelled 94.0 13 PDB header:unknown function Chain: D: PDB Molecule:fibronectin(iii)-like module; PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules 39 c2x27X_ not modelled 93.4 13 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa 40 c3nsgA_ not modelled 92.9 18 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi 41 c3brzA_ not modelled 92.5 14 PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx 42 d1uynx_ not modelled 91.8 10 Fold:Transmembrane beta-barrels Superfamily:Autotransporter Family:Autotransporter 43 d3prna_ not modelled 91.8 14 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 44 c3pe9B_ not modelled 91.8 17 PDB header:unknown function Chain: B: PDB Molecule:fibronectin(iii)-like module; PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules 45 d1i78a_ not modelled 91.3 10 Fold:Transmembrane beta-barrels Superfamily:OMPT-like Family:Outer membrane protease OMPT 46 d2pora_ not modelled 91.3 9 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 47 c2vqiA_ not modelled 91.1 15 PDB header:transport Chain: A: PDB Molecule:outer membrane usher protein papc; PDBTitle: structure of the p pilus usher (papc) translocation pore 48 c3sljA_ not modelled 90.7 13 PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant 49 d1p4ta_ not modelled 90.3 12 Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein 50 d2fgqx1 not modelled 89.4 17 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin 51 c2o4vA_ not modelled 87.3 12 PDB header:membrane protein Chain: A: PDB Molecule:porin p; PDBTitle: an arginine ladder in oprp mediates phosphate specific transfer across2 the outer membrane 52 c3a2rX_ not modelled 81.8 10 PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis 53 d1pama3 not modelled 80.4 30 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 54 d1ja3a_ not modelled 78.4 16 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 55 d1qhoa3 not modelled 77.8 19 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 56 d1cyga3 not modelled 76.3 33 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 57 d3bmva3 not modelled 75.9 33 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 58 d1rdl1_ not modelled 75.8 17 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 59 d1cxla3 not modelled 75.8 30 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 60 d1byfa_ not modelled 75.7 29 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 61 d1cgta3 not modelled 75.6 33 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 62 d2afpa_ not modelled 75.6 14 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 63 c3c8jB_ not modelled 75.5 16 PDB header:immune system Chain: B: PDB Molecule:natural killer cell receptor ly49c; PDBTitle: the crystal structure of natural killer cell receptor ly49c 64 c2wjqA_ not modelled 75.2 9 PDB header:transport protein Chain: A: PDB Molecule:probable n-acetylneuraminic acid outer membrane channel PDBTitle: nanc porin structure in hexagonal crystal form. 65 c2lhfA_ not modelled 74.9 14 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein h1; PDBTitle: solution structure of outer membrane protein h (oprh) from p.2 aeruginosa in dhpc micelles 66 c3k7bA_ not modelled 74.8 21 PDB header:viral protein Chain: A: PDB Molecule:protein a33; PDBTitle: the structure of the poxvirus a33 protein reveals a dimer of unique c-2 type lectin-like domains. 67 c2dcjA_ not modelled 74.2 25 PDB header:hydrolase Chain: A: PDB Molecule:xylanase j; PDBTitle: a two-domain structure of alkaliphilic xynj from bacillus sp. 41m-1 68 c3dwoX_ not modelled 73.5 11 PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue 69 d1wk1a_ not modelled 72.6 24 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 70 c1eslA_ not modelled 72.1 28 PDB header:cell adhesion protein Chain: A: PDB Molecule:human e-selectin; PDBTitle: insight into e-selectin(slash)ligand interaction from the2 crystal structure and mutagenesis of the lec(slash)egf3 domains 71 d1l0qa1 not modelled 71.2 15 Fold:Immunoglobulin-like beta-sandwich Superfamily:PKD domain Family:PKD domain 72 d3c8ja1 not modelled 70.8 16 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 73 c2bpdB_ 70.7 17 PDB header:receptor Chain: B: PDB Molecule:dectin-1; PDBTitle: structure of murine dectin-1 74 d1tlya_ not modelled 69.5 23 Fold:Transmembrane beta-barrels Superfamily:Tsx-like channel Family:Tsx-like channel 75 d1yu3a2 not modelled 68.7 19 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Mtd variable domain 76 c2lfcA_ not modelled 68.5 31 PDB header:oxidoreductase Chain: A: PDB Molecule:fumarate reductase, flavoprotein subunit; PDBTitle: solution nmr structure of fumarate reductase flavoprotein subunit from2 lactobacillus plantarum, northeast structural genomics consortium3 target lpr145j 77 c2iwvD_ not modelled 67.7 21 PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation 78 c2zwkA_ not modelled 66.5 30 PDB header:cell adhesion Chain: A: PDB Molecule:intimin; PDBTitle: crystal structure of intimin-tir90 complex 79 d1y4ja1 not modelled 66.4 23 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Sulfatase-modifying factor-like 80 c2q17C_ not modelled 66.3 17 PDB header:unknown function Chain: C: PDB Molecule:formylglycine generating enzyme; PDBTitle: formylglycine generating enzyme from streptomyces coelicolor 81 d1yu0a2 not modelled 65.7 19 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Mtd variable domain 82 d1z70x1 not modelled 65.1 20 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Sulfatase-modifying factor-like 83 d2msba_ not modelled 64.2 26 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 84 d1rjha_ not modelled 63.9 10 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 85 c1y1fX_ not modelled 61.5 23 PDB header:oxidoreductase Chain: X: PDB Molecule:c-alpha-formyglycine-generating enzyme; PDBTitle: human formylglycine generating enzyme with cysteine sulfenic acid 86 d2gufa1 not modelled 61.2 11 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel 87 c2kzwA_ not modelled 60.6 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of q8psa4 from methanosarcina mazei, northeast2 structural genomics consortium target mar143a 88 c2zibA_ not modelled 59.7 15 PDB header:antifreeze protein Chain: A: PDB Molecule:type ii antifreeze protein; PDBTitle: crystal structure analysis of calcium-independent type ii2 antifreeze protein 89 d1g1ta1 not modelled 58.9 22 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 90 c1hupA_ not modelled 58.5 13 PDB header:c-type lectin Chain: A: PDB Molecule:mannose-binding protein; PDBTitle: human mannose binding protein carbohydrate recognition domain2 trimerizes through a triple alpha-helical coiled-coil 91 c2k53A_ not modelled 58.2 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:a3dk08 protein; PDBTitle: nmr solution structure of a3dk08 protein from clostridium2 thermocellum: northeast structural genomics consortium3 target cmr9 92 c3dbzB_ not modelled 58.1 16 PDB header:sugar binding protein Chain: B: PDB Molecule:pulmonary surfactant-associated protein d; PDBTitle: human surfactant protein d 93 d1g1sa1 not modelled 57.7 9 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 94 d1r13a1 not modelled 57.6 9 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 95 d1xpha1 not modelled 57.5 6 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 96 c2iouC_ not modelled 57.1 17 PDB header:viral protein/membrane protein Chain: C: PDB Molecule:major tropism determinant p1; PDBTitle: major tropism determinant p1 (mtd-p1) variant complexed with2 bordetella brochiseptica virulence factor pertactin extracellular3 domain (prn-e). 97 d1rr7a_ not modelled 56.7 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Middle operon regulator, Mor 98 c1rr7A_ not modelled 56.7 14 PDB header:transcription Chain: A: PDB Molecule:middle operon regulator; PDBTitle: crystal structure of the middle operon regulator protein of2 bacteriophage mu 99 c1fm5A_ not modelled 56.4 23 PDB header:immune system Chain: A: PDB Molecule:early activation antigen cd69; PDBTitle: crystal structure of human cd69 100 c3cfwA_ not modelled 56.2 30 PDB header:cell adhesion Chain: A: PDB Molecule:l-selectin; PDBTitle: l-selectin lectin and egf domains 101 c2yrlA_ not modelled 54.2 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kiaa1837 protein; PDBTitle: solution structure of the pkd domain from kiaa 1837 protein 102 c1l0qC_ not modelled 53.8 17 PDB header:protein binding Chain: C: PDB Molecule:surface layer protein; PDBTitle: tandem yvtn beta-propeller and pkd domains from an archaeal surface2 layer protein 103 c2elhA_ not modelled 53.5 33 PDB header:dna binding protein Chain: A: PDB Molecule:cg11849-pa; PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa 104 c3rfzB_ not modelled 52.9 12 PDB header:cell adhesion/transport/chaperone Chain: B: PDB Molecule:outer membrane usher protein, type 1 fimbrial synthesis; PDBTitle: crystal structure of the fimd usher bound to its cognate fimc:fimh2 substrate 105 d1egga_ not modelled 52.5 14 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 106 d1fepa_ not modelled 52.3 12 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel 107 c3m9zA_ not modelled 52.1 7 PDB header:signaling protein Chain: A: PDB Molecule:killer cell lectin-like receptor subfamily b member 1a; PDBTitle: crystal structure of extracellular domain of mouse nkr-p1a 108 c2c5uA_ 51.7 30 PDB header:ligase Chain: A: PDB Molecule:rna ligase; PDBTitle: t4 rna ligase (rnl1) crystal structure 109 d1by5a_ not modelled 51.7 11 Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel 110 c2py2E_ not modelled 51.3 13 PDB header:antifreeze protein Chain: E: PDB Molecule:antifreeze protein type ii; PDBTitle: structure of herring type ii antifreeze protein 111 d1f00i3 not modelled 51.2 30 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:Invasin/intimin cell-adhesion fragment, C-terminal domain 112 c1kwwC_ not modelled 50.3 16 PDB header:immune system, sugar binding protein Chain: C: PDB Molecule:mannose-binding protein a; PDBTitle: rat mannose protein a complexed with a-me-fuc. 113 d1o75a1 not modelled 49.7 35 Fold:Immunoglobulin-like beta-sandwich Superfamily:Tp47 lipoprotein, middle and C-terminal domains Family:Tp47 lipoprotein, middle and C-terminal domains 114 d1y0pa3 not modelled 48.9 17 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 115 c3orjA_ not modelled 48.8 17 PDB header:sugar binding protein Chain: A: PDB Molecule:sugar-binding protein; PDBTitle: crystal structure of a sugar-binding protein (bacova_04391) from2 bacteroides ovatus at 2.16 a resolution 116 d1fifa1 not modelled 48.7 27 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 117 c2ostC_ not modelled 47.7 40 PDB header:hydrolase/dna Chain: C: PDB Molecule:putative endonuclease; PDBTitle: the structure of a bacterial homing endonuclease : i-ssp6803i 118 d2jn6a1 not modelled 46.6 30 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Cgl2762-like 119 c1g1qD_ not modelled 45.9 21 PDB header:immune system, membrane protein Chain: D: PDB Molecule:p-selectin; PDBTitle: crystal structure of p-selectin lectin/egf domains 120 c2pmzV_ not modelled 45.6 18 PDB header:translation, transferase Chain: V: PDB Molecule:dna-directed rna polymerase subunit h; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus