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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2vqiA_

Fold library idPDB HeaderMoleculeTitle
c2vqiA_PDB header: transportChain: A: PDB Molecule: outer membrane usher protein papc;PDBTitle: structure of the p pilus usher (papc) translocation pore


Added to library: Tue Mar 16 14:29:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LXLDYNLNGTVSRNYQGGDSHQFSYNGTVGGNLPWRLRADYQGSQEQSRYNGEKTTNRNFTWSRFYLFRA
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Known secondary structure (DSSP)
SSS

B



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IPRWRANLTLGENNINSDIFRSWSYTGASLESXLPPRLRGYAPQITGIAETNARVVVSQQGRVLYDSXVP
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SSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AGPFSIQDLDSSVRGRLDVEVIEQNGRKKTFQVDTASVPYLTRPGQVRYKLVSGRSRGYEGPVFATGEAS
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Known secondary structure (DSSP) S



TT

S
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 .........220.........230.........240.........250.........260.........270.........280
Sequence WGLSNQWSLYGGAVLAGDYNALAAGAGWDLGVPGTLSADITQSVARIEGERTFQGKSWRLSYSKRFDDIT
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SSS
SS
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 .........290.........300.........310.........320.........330.........340.........350
Sequence FAGYRFSERNYXTXEQYLNARYRNDYSSREKEXYTVTLNKNVADWNTSFNLQYSRQTYWDIRKTDYYTVS
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Known secondary structure (DSSP)
TT


S





TTTTSSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence VNRYFNVFLQGVAVGLSASRSKYLGRDNDSAYLRISVPLGTGTASYSGSXSNDRYVNXAGYTDTFNDGLD
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Known secondary structure (DSSP) SSSTTTTTTGGGT
 .........430.........440.........450.........460.........470.......
Sequence SYSLNAGLNSGLTSQRQINAYYSHRSPLANLSANIASLQKGYTSFGVSASGGATITG
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Known secondary structure (DSSP)



TTTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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