Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	F	T	S	V	A	Q	A	N	A	A	V	I	E	Q	I	R	R	A	R	P	H	W	L	D	V	Q	P	A	S	S	L	I	S	E	L	N	E	G	K	T	L	L	H	A	G	P	P	M	R	W	Q	E	M	T	G	P	M	K	G
Secondary structure
SS confidence
Disorder		?	?	?	?				?																		?							?					?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	C	V	G	A	C	L	F	E	G	W	A	K	D	E	A	Q	A	L	A	I	L	E	Q	G	E	V	N	F	I	P	C	H	H	V	N	A	V	G	P	M	G	G	I	T	S	A	S	M	P	M	L	V	V	E	N	V	T	D	G
Secondary structure
SS confidence
Disorder																									?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		N	R	A	Y	C	N	L	N	E	G	I	G	K	V	M	R	F	G	A	Y	G	E	D	V	L	T	R	H	R	W	M	R	D	V	L	M	P	V	L	S	A	A	L	G	R	M	E	R	G	I	D	L	T	A	M	M	A	Q	G	I
Secondary structure
SS confidence
Disorder																																														?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		T	M	G	D	E	F	H	Q	R	N	I	A	S	S	A	L	L	M	R	A	L	A	P	Q	I	A	R	L	D	H	D	K	Q	H	I	A	E	V	M	D	F	L	S	V	T	D	Q	F	F	L	N	L	A	M	A	Y	C	K	A	A
Secondary structure
SS confidence
Disorder																												?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		M	D	A	G	A	M	I	R	A	G	S	I	V	T	A	M	T	R	N	G	N	M	F	G	I	R	V	S	G	L	G	E	R	W	F	T	A	P	V	N	T	P	Q	G	L	F	F	T	G	F	S	Q	E	Q	A	N	P	D	M	G
Secondary structure
SS confidence
Disorder						?		?	?																								?																							?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		D	S	A	I	T	E	T	F	G	I	G	G	A	A	M	I	A	A	P	G	V	T	R	F	V	G	A	G	G	M	E	A	A	R	A	V	S	E	E	M	A	E	I	Y	L	E	R	N	M	Q	L	Q	I	P	S	W	D	F	Q	G
Secondary structure
SS confidence
Disorder																		?							?	?	?	?	?		?																								?		?		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Sequence		A	C	L	G	L	D	I	R	R	V	V	E	T	G	I	T	P	L	I	N	T	G	I	A	H	K	E	A	G	I	G	Q	I	G	A	G	T	V	R	A	P	L	A	C	F	E	Q	A	L	E	A	L	A	E	S	M	G	I	G
Secondary structure
SS confidence
Disorder		?	?	?																					?	?	?	?	?	?	?	?		?																							?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3clq chain C Region: 1 - 416 Aligned: 414 Modelled: 415 Confidence: 100.0% Identity: 43% PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a conserved protein of unknown function from2 enterococcus faecalis v583 Phyre2 PDB 2pw4 chain A domain 1 Region: 76 - 137 Aligned: 49 Modelled: 62 Confidence: 62.1% Identity: 18% Fold: Jann2411-like Superfamily: Jann2411-like Family: Jann2411-like Phyre2 PDB 2cqj chain A Region: 66 - 89 Aligned: 24 Modelled: 24 Confidence: 49.5% Identity: 33% PDB header:rna binding protein Chain: A: PDB Molecule:u3 small nucleolar ribonucleoprotein protein PDBTitle: solution structure of the s4 domain of u3 small nucleolar2 ribonucleoprotein protein imp3 homolog Phyre2 PDB 2htm chain B Region: 352 - 419 Aligned: 55 Modelled: 68 Confidence: 45.8% Identity: 22% PDB header:biosynthetic protein Chain: B: PDB Molecule:thiazole biosynthesis protein thig; PDBTitle: crystal structure of ttha0676 from thermus thermophilus hb8 Phyre2 PDB 1pdz chain A domain 2 Region: 197 - 248 Aligned: 51 Modelled: 52 Confidence: 45.3% Identity: 24% Fold: Enolase N-terminal domain-like Superfamily: Enolase N-terminal domain-like Family: Enolase N-terminal domain-like Phyre2 PDB 2akz chain A domain 2 Region: 197 - 245 Aligned: 49 Modelled: 49 Confidence: 38.2% Identity: 18% Fold: Enolase N-terminal domain-like Superfamily: Enolase N-terminal domain-like Family: Enolase N-terminal domain-like Phyre2 PDB 2al1 chain A domain 2 Region: 197 - 245 Aligned: 49 Modelled: 49 Confidence: 33.9% Identity: 24% Fold: Enolase N-terminal domain-like Superfamily: Enolase N-terminal domain-like Family: Enolase N-terminal domain-like Phyre2 PDB 1alu chain A Region: 142 - 199 Aligned: 53 Modelled: 53 Confidence: 33.0% Identity: 15% Fold: 4-helical cytokines Superfamily: 4-helical cytokines Family: Long-chain cytokines Phyre2 PDB 2re2 chain A Region: 74 - 96 Aligned: 22 Modelled: 23 Confidence: 32.2% Identity: 27% PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein ta1041; PDBTitle: crystal structure of a putative iron-molybdenum cofactor (femo-co)2 dinitrogenase (ta1041m) from thermoplasma acidophilum dsm 1728 at3 1.30 a resolution Phyre2 PDB 1h3f chain A domain 2 Region: 62 - 89 Aligned: 28 Modelled: 28 Confidence: 21.6% Identity: 11% Fold: Alpha-L RNA-binding motif Superfamily: Alpha-L RNA-binding motif Family: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain Phyre2 PDB 2y9x chain G Region: 257 - 299 Aligned: 43 Modelled: 43 Confidence: 21.2% Identity: 30% PDB header:oxidoreductase Chain: G: PDB Molecule:lectin-like fold protein; PDBTitle: crystal structure of ppo3, a tyrosinase from agaricus bisporus, in2 deoxy-form that contains additional unknown lectin-like subunit,3 with inhibitor tropolone Phyre2 PDB 1c06 chain A Region: 65 - 89 Aligned: 25 Modelled: 25 Confidence: 21.1% Identity: 20% Fold: Alpha-L RNA-binding motif Superfamily: Alpha-L RNA-binding motif Family: Ribosomal protein S4 Phyre2 PDB 3hp7 chain A Region: 65 - 88 Aligned: 24 Modelled: 18 Confidence: 19.4% Identity: 21% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus. Phyre2 PDB 1vjt chain A Region: 306 - 381 Aligned: 57 Modelled: 75 Confidence: 18.3% Identity: 7% PDB header:hydrolase Chain: A: PDB Molecule:alpha-glucosidase; PDBTitle: crystal structure of alpha-glucosidase (tm0752) from thermotoga2 maritima at 2.50 a resolution Phyre2 PDB 2d5n chain B Region: 87 - 121 Aligned: 35 Modelled: 35 Confidence: 17.7% Identity: 26% PDB header:hydrolase, oxidoreductase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis Phyre2 PDB 2l58 chain A Region: 176 - 190 Aligned: 15 Modelled: 15 Confidence: 16.7% Identity: 47% PDB header:apoptosis Chain: A: PDB Molecule:activator of apoptosis harakiri; PDBTitle: solution structure of the cytosolic fragment 22-53 of bcl-2 member2 harakiri Phyre2 PDB 2gy9 chain D domain 1 Region: 65 - 89 Aligned: 25 Modelled: 25 Confidence: 16.4% Identity: 12% Fold: Alpha-L RNA-binding motif Superfamily: Alpha-L RNA-binding motif Family: Ribosomal protein S4 Phyre2 PDB 2isb chain A domain 1 Region: 17 - 47 Aligned: 31 Modelled: 31 Confidence: 15.3% Identity: 16% Fold: The "swivelling" beta/beta/alpha domain Superfamily: FumA C-terminal domain-like Family: FumA C-terminal domain-like Phyre2 PDB 3msu chain A Region: 346 - 375 Aligned: 30 Modelled: 30 Confidence: 13.8% Identity: 20% PDB header:transferase Chain: A: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from francisella tularensis Phyre2 PDB 1nub chain A domain 2 Region: 90 - 97 Aligned: 8 Modelled: 8 Confidence: 12.4% Identity: 25% Fold: Knottins (small inhibitors, toxins, lectins) Superfamily: EGF/Laminin Family: Follistatin (FS) module N-terminal domain, FS-N Phyre2 1 c3clqC_ 2 d2pw4a1 3 c2cqjA_ 4 c2htmB_ 5 d1pdza2 6 d2akza2 7 d2al1a2 8 d1alua_ 9 c2re2A_ 10 d1h3fa2 11 c2y9xG_ 12 d1c06a_ 13 c3hp7A_ 14 c1vjtA_ 15 c2d5nB_ 16 c2l58A_ 17 d2gy9d1 18 d2isba1 19 c3msuA_ 20 d1nuba2 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3clqC_ 100.0 43 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a conserved protein of unknown function from2 enterococcus faecalis v583 2 d2pw4a1 62.1 18 Fold:Jann2411-like Superfamily:Jann2411-like Family:Jann2411-like 3 c2cqjA_ 49.5 33 PDB header:rna binding protein Chain: A: PDB Molecule:u3 small nucleolar ribonucleoprotein protein PDBTitle: solution structure of the s4 domain of u3 small nucleolar2 ribonucleoprotein protein imp3 homolog 4 c2htmB_ 45.8 22 PDB header:biosynthetic protein Chain: B: PDB Molecule:thiazole biosynthesis protein thig; PDBTitle: crystal structure of ttha0676 from thermus thermophilus hb8 5 d1pdza2 45.3 24 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 6 d2akza2 38.2 18 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 7 d2al1a2 33.9 24 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 8 d1alua_ 33.0 15 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 9 c2re2A_ 32.2 27 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein ta1041; PDBTitle: crystal structure of a putative iron-molybdenum cofactor (femo-co)2 dinitrogenase (ta1041m) from thermoplasma acidophilum dsm 1728 at3 1.30 a resolution 10 d1h3fa2 21.6 11 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain 11 c2y9xG_ 21.2 30 PDB header:oxidoreductase Chain: G: PDB Molecule:lectin-like fold protein; PDBTitle: crystal structure of ppo3, a tyrosinase from agaricus bisporus, in2 deoxy-form that contains additional unknown lectin-like subunit,3 with inhibitor tropolone 12 d1c06a_ 21.1 20 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 13 c3hp7A_ 19.4 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus. 14 c1vjtA_ 18.3 7 PDB header:hydrolase Chain: A: PDB Molecule:alpha-glucosidase; PDBTitle: crystal structure of alpha-glucosidase (tm0752) from thermotoga2 maritima at 2.50 a resolution 15 c2d5nB_ 17.7 26 PDB header:hydrolase, oxidoreductase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribd; PDBTitle: crystal structure of a bifunctional deaminase and reductase2 involved in riboflavin biosynthesis 16 c2l58A_ 16.7 47 PDB header:apoptosis Chain: A: PDB Molecule:activator of apoptosis harakiri; PDBTitle: solution structure of the cytosolic fragment 22-53 of bcl-2 member2 harakiri 17 d2gy9d1 16.4 12 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 18 d2isba1 15.3 16 Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like 19 c3msuA_ 13.8 20 PDB header:transferase Chain: A: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from francisella tularensis 20 d1nuba2 12.4 25 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:Follistatin (FS) module N-terminal domain, FS-N 21 d2fyma2 not modelled 12.2 18 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 22 c2ldkA_ not modelled 12.2 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein aaur_3427 from arthrobacter2 aurescens, northeast structural genomics consortium target aar96 23 c2qnfB_ not modelled 11.7 28 PDB header:hydrolase/dna Chain: B: PDB Molecule:recombination endonuclease vii; PDBTitle: crystal structure of t4 endonuclease vii h43n mutant in2 complex with heteroduplex dna containing base mismatches 24 c2xzmD_ not modelled 11.5 9 PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 25 c3d0jA_ not modelled 11.4 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ca_c3497; PDBTitle: crystal structure of conserved protein of unknown function ca_c34972 from clostridium acetobutylicum atcc 824 26 c2bibA_ not modelled 11.1 12 PDB header:hydrolase Chain: A: PDB Molecule:teichoic acid phosphorylcholine esterase/ choline binding PDBTitle: crystal structure of the complete modular teichioic acid2 phosphorylcholine esterase pce (cbpe) from streptococcus3 pneumoniae 27 d1jh3a_ not modelled 10.4 18 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain 28 d1kfia4 not modelled 9.9 29 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 29 d1duvg1 not modelled 9.7 19 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 30 d1t6la2 not modelled 9.5 67 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 31 d2o34a1 not modelled 9.4 43 Fold:T-fold Superfamily:ApbE-like Family:DVU1097-like 32 d2jeka1 not modelled 9.4 17 Fold:Rv1873-like Superfamily:Rv1873-like Family:Rv1873-like 33 c2bs5A_ not modelled 9.2 20 PDB header:sugar binding protein Chain: A: PDB Molecule:fucose-binding lectin protein; PDBTitle: lectin from ralstonia solanacearum complexed with 2-2 fucosyllactose 34 c2hxvA_ not modelled 8.9 29 PDB header:biosynthetic protein Chain: A: PDB Molecule:diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5- PDBTitle: crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine2 deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828)3 from thermotoga maritima at 1.80 a resolution 35 d1s4da_ not modelled 8.7 19 Fold:Tetrapyrrole methylase Superfamily:Tetrapyrrole methylase Family:Tetrapyrrole methylase 36 d1p9ka_ not modelled 8.3 38 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 37 d3pmga4 not modelled 8.0 19 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 38 c2i7uA_ not modelled 7.6 48 PDB header:de novo protein/ligand binding protein Chain: A: PDB Molecule:four-alpha-helix bundle; PDBTitle: structural and dynamical analysis of a four-alpha-helix2 bundle with designed anesthetic binding pockets 39 c1zc1A_ not modelled 7.4 20 PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites 40 d2uubd1 not modelled 7.3 25 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Ribosomal protein S4 41 d2hsja1 not modelled 7.1 19 Fold:Flavodoxin-like Superfamily:SGNH hydrolase Family:Acetylhydrolase 42 c1s1hD_ not modelled 7.0 23 PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s9-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. 43 c2yujA_ not modelled 6.9 20 PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 44 d1twda_ not modelled 6.6 17 Fold:TIM beta/alpha-barrel Superfamily:CutC-like Family:CutC-like 45 c3bbnD_ not modelled 6.3 15 PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 46 c2iunD_ not modelled 6.3 25 PDB header:viral protein Chain: D: PDB Molecule:avian adenovirus celo long fibre; PDBTitle: structure of the c-terminal head domain of the avian2 adenovirus celo long fibre (p21 crystal form) 47 d1dxha1 not modelled 6.1 19 Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase 48 c2zt9F_ not modelled 6.0 37 PDB header:photosynthesis Chain: F: PDB Molecule:cytochrome b6-f complex subunit 7; PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120 49 c2e0wA_ not modelled 6.0 14 PDB header:transferase Chain: A: PDB Molecule:gamma-glutamyltranspeptidase; PDBTitle: t391a precursor mutant protein of gamma-glutamyltranspeptidase from2 escherichia coli 50 c3l2eB_ not modelled 5.9 16 PDB header:transferase Chain: B: PDB Molecule:glycocyamine kinase beta chain; PDBTitle: glycocyamine kinase, alpha-beta heterodimer from marine worm2 namalycastis sp. 51 c2lf2A_ not modelled 5.7 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the ahsa1-like protein chu_1110 from2 cytophaga hutchinsonii, northeast structural genomics consortium3 target chr152 52 c2w40C_ not modelled 5.7 18 PDB header:transferase Chain: C: PDB Molecule:glycerol kinase, putative; PDBTitle: crystal structure of plasmodium falciparum glycerol kinase2 with bound glycerol 53 c2f6sA_ not modelled 5.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cell filamentation protein, putative; PDBTitle: structure of cell filamentation protein (fic) from helicobacter pylori 54 c3btpA_ not modelled 5.5 36 PDB header:dna binding protein, chaperone Chain: A: PDB Molecule:single-strand dna-binding protein; PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding 55 d2c42a2 not modelled 5.3 44 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:PFOR PP module 56 c1yzxB_ not modelled 5.2 45 PDB header:transferase Chain: B: PDB Molecule:glutathione s-transferase kappa 1; PDBTitle: crystal structure of human kappa class glutathione2 transferase

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0