Fold library entry viewer: d2c42a2

Added to library: Tue Mar 16 12:43:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	K	S	E	V	L	P	R	D	S	L	K	G	S	Q	F	Q	E	P	L	M	E	F	S	G	A	C	S	G	C	G	E	T	P	Y	V	R	V	I	T	Q	L	F	G	E	R	M	F	I	A	N	A	T	G	C	S	S	I	W	G	A	S	A	P	S	M	P	Y	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S		T	T	S					T	T	S			S	B		S		S			T	T		S	S												G	G	G							S	S									T	T				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	R	L	G	Q	G	P	A	W	G	N	S	L	F	E	D	A	A	E	Y	G	F	G	M	N	M	S	M	F	A	R	R	T	H	L	A	D	L	A	A	K	A	L	E	S	D	A	S	G	D	V	K	E	A	L	Q	G	W	L	A	G	K	N	D	P	I	K	S	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S										S	T	T																												T	T	T																T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	G	D	K	L	K	K	L	L	A	G	Q	K	D	G	L	L	G	Q	I	A	A	M	S	D	L	Y	T	K	K	S	V	W	I	F	G	G	D	G	W	A	Y	D	I	G	Y	G	G	L	D	H	V	L	A	S	G	E	D	V	N	V	F	V	M	D	T	E	V	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T			S								T	T	G	G	G	T	S															T	T	T										T	T		S									S	S	B	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	T	G	G	Q	S	S	K	A	T	P	T	G	A	V	A	K	F	A	A	A	G	K	R	T	G	K	K	D	L	A	R	M	V	M	T	Y	G	Y	V	Y	V	A	T	V	S	M	G	Y	S	K	Q	Q	F	L	K	V	L	K	E	A	E	S	F	P	G	P	S	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T		B			T	T	S		T	T			B	B	T	B	T	T			S	S											T	T	S	S	S							T	T	T															S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	A	Y	A	T	C	I	N	Q	G	L	R	K	G	M	G	K	S	Q	D	V	M	N	T	A	V	K	S	G	Y	W	P	L	F	R	Y	D	P	R	L	A	A	Q	G	K	N	P	F	Q	L	D	S	K	A	P	D	G	S	V	E	E	F	L	M	A	Q	N	R	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G		B	T	T		G	G	G											T	T	S	S												T	T	S		S					S		S			S								T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	L	D	R	S	F	P	E	D	A	K	R	L	R	A	Q	V	A	H	E	L	D	V	R	F	K	E	L	E	H	M	A	A	T	N	I	F	E	S	F	A	P	A	G	G	K	A	D	G	S	V	D	F	G	E	G	A	E	F	C	T	R	D	D	T	P	M	M	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			S							S						S					T	T	T	T		S	S			S		S	S	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Sequence	P	D	S	G	E	A	C	D	Q	N	R	A	G	T	S	E	Q	Q	G	D	L	S	K	R	T	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	S	S													T

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PDB structure

FASTA sequence

Hidden Markov model

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