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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2xzmD_

Fold library idPDB HeaderMoleculeTitle
c2xzmD_PDB header: ribosomeChain: D: PDB Molecule: ribosomal protein s4 containing protein;PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1


Added to library: Sat Jan 22 08:41:51 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGKTYINTSKTYSTPRRPYEKERLDNEMKLIGTFGLKNKREVWRVQMILAKFRKAARELLTLDPKDPRRL
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Known secondary structure (DSSP)




S








SSTT
TT

STS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FEGSALLRRMFKYGLLSEQERKLDYVLGLTIHKLMERRLQTRVFKLNLANSIHHSRVLIRQRHIKVGKNL
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Known secondary structure (DSSP) TTSS
TT

STS

TTBTT
SSSTTTTTT

TT
 .........150.........160.........170.........
Sequence VNVPSFMVRTDSEKSIDFASTSPLGGGREGRTKRKNAKK
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Known secondary structure (DSSP)


S

B

STTSS

TTSTTTTT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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