Email l.a.kelley@imperial.ac.uk Description P52061 Date Wed Jan 25 15:20:57 GMT 2012 Unique Job ID 699ecdc8ef1e6ff2

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1k7ka_ 100.0 99 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 2 c3tquD_ 100.0 53 PDB header:hydrolase Chain: D: PDB Molecule:non-canonical purine ntp pyrophosphatase; PDBTitle: structure of a ham1 protein from coxiella burnetii 3 d1v7ra_ 100.0 36 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 4 d1vp2a_ 100.0 34 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 5 d2cara1 100.0 26 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 6 d1b78a_ 100.0 33 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 7 d2amha1 97.5 14 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:Maf-like 8 d1ex2a_ 93.3 20 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:Maf-like 9 c2p5xB_ 89.6 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:n-acetylserotonin o-methyltransferase-like protein; PDBTitle: crystal structure of maf domain of human n-acetylserotonin o-2 methyltransferase-like protein 10 d1u5wa1 81.5 21 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:YjjX-like 11 c3brcA_ 73.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein of unknown function; PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum 12 d1nn4a_ 72.6 15 Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB 13 c3m1pA_ 69.4 18 PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: structure of ribose 5-phosphate isomerase type b from trypanosoma2 cruzi, soaked with allose-6-phosphate 14 c3k7pA_ 69.4 18 PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: structure of mutant of ribose 5-phosphate isomerase type b from2 trypanosoma cruzi. 15 d1zwya1 67.1 18 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:YjjX-like 16 c3crqA_ 64.8 19 PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel 17 c3c5yD_ 59.8 18 PDB header:isomerase Chain: D: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of a putative ribose 5-phosphate isomerase2 (saro_3514) from novosphingobium aromaticivorans dsm at 1.81 a3 resolution 18 c3fozB_ 56.4 17 PDB header:transferase/rna Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe) 19 c3c5tB_ 46.8 38 PDB header:signaling protein/signaling protein Chain: B: PDB Molecule:exendin-4; PDBTitle: crystal structure of the ligand-bound glucagon-like peptide-1 receptor2 extracellular domain 20 c3onoA_ 39.8 21 PDB header:isomerase Chain: A: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase lacab_rpib from2 vibrio parahaemolyticus 21 c2ppwA_ not modelled 38.9 17 PDB header:isomerase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of uncharacterized ribose 5-phosphate isomerase2 rpib from streptococcus pneumoniae 22 d2vvpa1 not modelled 29.4 18 Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB 23 d1u14a_ not modelled 29.2 17 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:YjjX-like 24 c2jrlA_ not modelled 26.8 17 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer 25 c1nm3B_ not modelled 26.7 25 PDB header:electron transport Chain: B: PDB Molecule:protein hi0572; PDBTitle: crystal structure of heamophilus influenza hybrid-prx5 26 d1rlka_ not modelled 26.5 18 Fold:Peptidyl-tRNA hydrolase II Superfamily:Peptidyl-tRNA hydrolase II Family:Peptidyl-tRNA hydrolase II 27 d2pc6a1 not modelled 26.2 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 28 d2fgca1 not modelled 26.0 26 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 29 c3d3qB_ not modelled 25.6 22 PDB header:transferase Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of trna delta(2)-isopentenylpyrophosphate2 transferase (se0981) from staphylococcus epidermidis.3 northeast structural genomics consortium target ser100 30 c1d0rA_ not modelled 25.4 38 PDB header:hormone/growth factor Chain: A: PDB Molecule:glucagon-like peptide-1-(7-36)-amide; PDBTitle: solution structure of glucagon-like peptide-1-(7-36)-amide2 in trifluoroethanol/water 31 c3exaD_ not modelled 24.9 20 PDB header:transferase Chain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41. 32 d1vbva1 not modelled 24.6 22 Fold:SH3-like barrel Superfamily:YccV-like Family:YccV-like 33 c1jrjA_ not modelled 24.1 38 PDB header:hormone/growth factor Chain: A: PDB Molecule:exendin-4; PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol 34 d1ixra2 not modelled 23.2 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA helicase RuvA subunit, N-terminal domain 35 c3i42A_ not modelled 23.1 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:response regulator receiver domain protein (chey- PDBTitle: structure of response regulator receiver domain (chey-like)2 from methylobacillus flagellatus 36 d2f1fa2 not modelled 22.9 19 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 37 d1l8na1 not modelled 22.5 15 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain 38 c3rh0A_ not modelled 22.0 30 PDB header:oxidoreductase Chain: A: PDB Molecule:arsenate reductase; PDBTitle: corynebacterium glutamicum mycothiol/mycoredoxin1-dependent arsenate2 reductase cg_arsc2 39 d1rp3a2 not modelled 21.5 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 40 c1mqrA_ not modelled 20.3 15 PDB header:hydrolase Chain: A: PDB Molecule:alpha-d-glucuronidase; PDBTitle: the crystal structure of alpha-d-glucuronidase (e386q) from bacillus2 stearothermophilus t-6 41 c3crnA_ not modelled 19.8 7 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver domain protein, chey-like; PDBTitle: crystal structure of response regulator receiver domain protein (chey-2 like) from methanospirillum hungatei jf-1 42 c3he8A_ not modelled 19.6 18 PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase; PDBTitle: structural study of clostridium thermocellum ribose-5-phosphate2 isomerase b 43 d2eyqa2 not modelled 19.1 23 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 44 d1o1xa_ not modelled 18.4 16 Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB 45 d1c01a_ not modelled 17.8 21 Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Plant antimicrobial protein MIAMP1 46 d3ehwa1 not modelled 16.2 50 Fold:beta-clip Superfamily:dUTPase-like Family:dUTPase-like 47 d2nn6h3 not modelled 15.4 14 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 48 d1smyf2 not modelled 15.1 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 49 d1q7sa_ not modelled 14.8 20 Fold:Peptidyl-tRNA hydrolase II Superfamily:Peptidyl-tRNA hydrolase II Family:Peptidyl-tRNA hydrolase II 50 c3jteA_ not modelled 13.7 12 PDB header:protein binding Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver domain2 protein from clostridium thermocellum 51 c3a8tA_ not modelled 13.3 24 PDB header:transferase Chain: A: PDB Molecule:adenylate isopentenyltransferase; PDBTitle: plant adenylate isopentenyltransferase in complex with atp 52 c3mzyA_ not modelled 12.8 15 PDB header:rna binding protein Chain: A: PDB Molecule:rna polymerase sigma-h factor; PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a 53 c2wmpB_ not modelled 12.4 33 PDB header:chaperone Chain: B: PDB Molecule:papg protein; PDBTitle: structure of the e. coli chaperone papd in complex with the pilin2 domain of the papgii adhesin 54 d3erja1 not modelled 12.0 20 Fold:Peptidyl-tRNA hydrolase II Superfamily:Peptidyl-tRNA hydrolase II Family:Peptidyl-tRNA hydrolase II 55 d2f06a2 not modelled 11.9 16 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 56 c3f4fB_ not modelled 11.3 50 PDB header:hydrolase Chain: B: PDB Molecule:deoxyuridine 5'-triphosphate nucleotidohydrolase; PDBTitle: crystal structure of dut1p, a dutpase from saccharomyces cerevisiae 57 c3kc2A_ not modelled 11.2 19 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein ykr070w; PDBTitle: crystal structure of mitochondrial had-like phosphatase from2 saccharomyces cerevisiae 58 d1dq3a4 not modelled 10.7 17 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Intein endonuclease 59 c2zv3E_ not modelled 10.7 22 PDB header:hydrolase Chain: E: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: crystal structure of project mj0051 from methanocaldococcus2 jannaschii dsm 2661 60 d1ku7a_ not modelled 10.7 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 61 c2qr3A_ not modelled 10.6 13 PDB header:transcription Chain: A: PDB Molecule:two-component system response regulator; PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis 62 c3hugA_ not modelled 10.3 22 PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl 63 c1xtyD_ not modelled 10.0 16 PDB header:hydrolase Chain: D: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: crystal structure of sulfolobus solfataricus peptidyl-trna2 hydrolase 64 c1or7A_ not modelled 9.3 12 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma-e factor; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea 65 c2rpbA_ not modelled 8.9 18 PDB header:membrane protein Chain: A: PDB Molecule:hypothetical membrane protein; PDBTitle: the solution structure of membrane protein 66 c3c3mA_ not modelled 8.9 10 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1 67 c3s5pA_ not modelled 8.9 20 PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia 68 c1yd2A_ not modelled 8.8 18 PDB header:dna binding protein Chain: A: PDB Molecule:uvrabc system protein c; PDBTitle: crystal structure of the giy-yig n-terminal endonuclease domain of2 uvrc from thermotoga maritima: point mutant y19f bound to the3 catalytic divalent cation 69 d2ix0a2 not modelled 8.6 35 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 70 c3qd5B_ not modelled 8.6 24 PDB header:isomerase Chain: B: PDB Molecule:putative ribose-5-phosphate isomerase; PDBTitle: crystal structure of a putative ribose-5-phosphate isomerase from2 coccidioides immitis solved by combined iodide ion sad and mr 71 d1or7a1 not modelled 8.4 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 72 c3cg0A_ not modelled 8.4 17 PDB header:lyase Chain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding 73 c1upiA_ not modelled 8.3 21 PDB header:epimerase Chain: A: PDB Molecule:dtdp-4-dehydrorhamnose 3,5-epimerase; PDBTitle: mycobacterium tuberculosis rmlc epimerase (rv3465) 74 d1j9ba_ not modelled 7.7 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:ArsC-like 75 c3ehwA_ not modelled 7.7 50 PDB header:hydrolase Chain: A: PDB Molecule:dutp pyrophosphatase; PDBTitle: human dutpase in complex with alpha,beta-imido-dutp and mg2+:2 visualization of the full-length c-termini in all monomers and3 suggestion for an additional metal ion binding site 76 d1cuka3 not modelled 7.7 28 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA helicase RuvA subunit, N-terminal domain 77 c1y7xA_ not modelled 7.5 10 PDB header:structural protein, protein binding Chain: A: PDB Molecule:major vault protein; PDBTitle: solution structure of a two-repeat fragment of major vault2 protein 78 c3h0dB_ not modelled 7.5 38 PDB header:transcription/dna Chain: B: PDB Molecule:ctsr; PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex 79 c1yd6A_ not modelled 7.5 45 PDB header:dna binding protein Chain: A: PDB Molecule:uvrc; PDBTitle: crystal structure of the giy-yig n-terminal endonuclease2 domain of uvrc from bacillus caldotenax 80 c2d3kA_ not modelled 7.4 20 PDB header:hydrolase Chain: A: PDB Molecule:peptidyl-trna hydrolase; PDBTitle: structural study on project id ph1539 from pyrococcus2 horikoshii ot3 81 d1muma_ not modelled 7.2 24 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Phosphoenolpyruvate mutase/Isocitrate lyase-like 82 d1ku3a_ not modelled 6.9 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 83 c2h5xA_ not modelled 6.9 23 PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva; PDBTitle: ruva from mycobacterium tuberculosis 84 c3eplA_ not modelled 6.7 18 PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism 85 c3b8iF_ not modelled 6.5 33 PDB header:lyase Chain: F: PDB Molecule:pa4872 oxaloacetate decarboxylase; PDBTitle: crystal structure of oxaloacetate decarboxylase from pseudomonas2 aeruginosa (pa4872) in complex with oxalate and mg2+. 86 c2lciA_ not modelled 6.3 19 PDB header:de novo protein Chain: A: PDB Molecule:protein or36; PDBTitle: solution nmr structure of de novo designed protein, p-loop ntpase2 fold, northeast structural genomics consortium target or36 (casd3 target) 87 d1jvaa3 not modelled 6.2 27 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Intein endonuclease 88 c2qn5B_ not modelled 6.1 36 PDB header:hydrolase inhibitor/hydrolase Chain: B: PDB Molecule:bowman-birk type bran trypsin inhibitor; PDBTitle: crystal structure and functional study of the bowman-birk2 inhibitor from rice bran in complex with bovine trypsin 89 d1mvoa_ not modelled 5.8 24 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 90 c3dlmA_ not modelled 5.8 15 PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase setdb1; PDBTitle: crystal structure of tudor domain of human histone-lysine n-2 methyltransferase setdb1 91 c3nhzA_ not modelled 5.7 20 PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra 92 d1h41a1 not modelled 5.7 20 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain 93 d1bvsa3 not modelled 5.6 28 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA helicase RuvA subunit, N-terminal domain 94 c2gx5B_ not modelled 5.4 11 PDB header:transcription Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody; PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody 95 c2gidP_ not modelled 5.3 36 PDB header:translation Chain: P: PDB Molecule:mitochondrial rna-binding protein 2; PDBTitle: crystal structures of trypanosoma bruciei mrp1/mrp2 96 d2p0sa1 not modelled 5.2 31 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:PG0945 N-terminal domain-like 97 c2dgbA_ not modelled 5.1 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein purs; PDBTitle: structure of thermus thermophilus purs in the p21 form 98 c1t39A_ not modelled 5.1 12 PDB header:transferase/dna Chain: A: PDB Molecule:methylated-dna--protein-cysteine PDBTitle: human o6-alkylguanine-dna alkyltransferase covalently2 crosslinked to dna 99 d1s7oa_ not modelled 5.0 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:YlxM/p13-like