PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3onoA_

Fold library id	PDB Header	Molecule	Title
c3onoA_	PDB header: isomerase	Chain: A: PDB Molecule: ribose/galactose isomerase;	PDBTitle: crystal structure of ribose-5-phosphate isomerase lacab_rpib from2 vibrio parahaemolyticus

Links to external resources
Added to library: Sat Sep 18 09:04:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N A X K I A L X X E N S Q A A K N A X V A G E L N S V A G G L G H D V F N V G X T D E N D H H L T Y I H L G I X A S I L L N S K A V D F V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G G T T
S
S S T T S S
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T G C G T G Q G A L X S C N L H P G V V C G Y C L E P S D A F L F N Q I N N G N A I S L A F A K G F G W A G E L N V R Y I F E K A F T G K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S T S T T
S S T
S S S T T
T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G E G Y P I E R A A P Q Q A N A A I L N N V K A A V A K D V V E G L R A I D Q E L V K T A V G S T Q F Q E C F F A H C Q V P E I A E Y V K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G S
S
T
S

. .

Sequence L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	X	K	I	A	L	X	X	E	N	S	Q	A	A	K	N	A	X	V	A	G	E	L	N	S	V	A	G	G	L	G	H	D	V	F	N	V	G	X	T	D	E	N	D	H	H	L	T	Y	I	H	L	G	I	X	A	S	I	L	L	N	S	K	A	V	D	F	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	G	G	G															T	T							S		S	S	T	T	S	S																	T	T	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	C	G	T	G	Q	G	A	L	X	S	C	N	L	H	P	G	V	V	C	G	Y	C	L	E	P	S	D	A	F	L	F	N	Q	I	N	N	G	N	A	I	S	L	A	F	A	K	G	F	G	W	A	G	E	L	N	V	R	Y	I	F	E	K	A	F	T	G	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S									T	S	T	T							S	S											T			S						S	S	T	T			T	T													S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	E	G	Y	P	I	E	R	A	A	P	Q	Q	A	N	A	A	I	L	N	N	V	K	A	A	V	A	K	D	V	V	E	G	L	R	A	I	D	Q	E	L	V	K	T	A	V	G	S	T	Q	F	Q	E	C	F	F	A	H	C	Q	V	P	E	I	A	E	Y	V	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	G	G	G																			S										S									T		S
	.	.
Sequence	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)