Fold library entry viewer: c1mqrA_

Added to library: Tue Mar 16 12:30:35 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	G	Y	E	P	C	W	L	R	Y	E	R	K	D	Q	Y	S	R	L	R	F	E	E	I	V	A	K	R	T	S	P	I	F	Q	A	V	V	E	E	L	Q	K	G	L	R	S	M	M	E	I	E	P	Q	V	V	Q	E	V	N	E	T	A	N	S	I	W	L	G	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			T	T								T	T	S													S																										S	S			T	T	S								G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	D	E	E	F	E	R	P	L	E	G	T	L	V	H	P	E	G	Y	V	I	R	S	D	V	D	D	G	P	F	R	I	Y	I	I	G	K	T	D	A	G	V	L	Y	G	V	F	H	F	L	R	L	L	Q	M	G	E	N	I	A	Q	L	S	I	I	E	Q	P	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	S							T			S	T	T									S	S	S	S								S	S																	T	T				T	T								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	L	R	M	I	N	H	W	D	N	M	D	G	S	I	E	R	G	Y	A	G	R	S	I	F	F	V	D	D	Q	F	V	K	N	Q	R	I	K	D	Y	A	R	L	L	A	S	V	G	I	N	A	I	S	I	N	N	V	N	V	H	K	T	E	T	K	L	I	T	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								B		T	T	S		B	T	T			S		S		S	S			T	T																		T	T							S		S	S							G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	L	P	D	V	A	E	V	A	D	I	F	R	T	Y	G	I	K	T	F	L	S	I	N	Y	A	S	P	I	E	I	G	G	L	P	T	A	D	P	L	D	P	E	V	R	R	W	W	K	E	T	A	K	R	I	Y	Q	Y	I	P	D	F	G	G	F	V	V	K	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														T	T									T	T					T	T			S				T	T	S																			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	E	F	R	P	G	P	F	T	Y	G	R	D	H	A	E	G	A	N	M	L	A	E	A	L	A	P	F	G	G	L	V	I	W	R	C	F	V	C	Q	Q	D	W	R	D	R	T	T	D	R	A	K	A	A	Y	D	H	F	K	P	L	D	G	Q	F	R	E	N	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S			G	G	G	G	T															G	G	G	T														T	T		T	T												G	G	G	T	T		S		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	Q	I	K	N	G	P	M	D	F	Q	V	R	E	P	V	S	P	L	F	G	A	M	P	K	T	N	Q	M	M	Q	V	Q	I	T	Q	E	Y	T	G	Q	Q	K	H	L	C	F	L	I	P	Q	W	K	E	V	L	D	F	D	T	Y	A	K	G	K	G	S	E	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S	S			S	S					T	T	T	T	T		T	T	S									S		T	T	T	T	T	T	T	S													T		B			T	T	S	S	S		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	V	I	D	G	S	L	F	D	Y	R	Y	S	G	I	A	G	V	S	N	I	G	S	D	P	N	W	T	G	H	T	L	A	Q	A	N	L	Y	G	F	G	R	L	A	W	N	P	D	L	S	A	E	E	I	A	N	E	W	V	V	Q	T	F	G	D	D	S	Q	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	T	T	T	T		S	S											S	S	T	T	S	S	S	S	G	G	G														T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	T	I	S	W	M	L	L	S	S	W	R	I	Y	E	N	Y	T	S	P	L	G	V	G	W	M	V	N	P	G	H	H	Y	G	P	N	V	D	G	Y	E	Y	S	H	W	G	T	Y	H	Y	A	D	R	D	G	I	G	V	D	R	T	V	A	T	G	T	G	Y	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S	S	S	T	T					B		T	T	T			S	B		T	T	T	T	T	T	S	S	S								S	S								T	T	T	S			G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	Y	F	P	E	N	A	A	M	Y	E	S	L	D	T	C	P	D	E	L	L	L	F	F	H	H	V	P	Y	T	H	R	L	H	S	G	E	T	V	I	Q	H	I	Y	N	T	H	F	E	G	V	E	Q	A	K	Q	L	R	K	R	W	E	Q	L	K	G	K	I	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S										S	T	T	T	S		G	G	G									T	T		B		T	T	S		B																									T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Sequence	K	R	Y	H	D	V	L	E	R	L	T	I	Q	V	E	H	A	K	E	W	R	D	V	I	N	T	Y	F	Y	R	K	S	G	I	D	D	Q	Y	G	R	K	I	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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