PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2ppwA_

Fold library id	PDB Header	Molecule	Title
c2ppwA_	PDB header: isomerase	Chain: A: PDB Molecule: conserved domain protein;	PDBTitle: the crystal structure of uncharacterized ribose 5-phosphate2 isomerase rpib from streptococcus pneumoniae

Links to external resources
Added to library: Tue Mar 16 13:23:50 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X K I A L I N E N S Q A S K N H I I Y D S L K E A T D K K G Y Q L F N Y G X R G E E G E S Q L T Y V Q N G L X A A I L L N T K A V D F V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T G G G T
S
S
T T
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T G C G T G V G A X L A L N S F P G V V C G L A V D P T D A Y L Y S Q I N G G N A L S I P Y A K G F G W G A E L T L K L X F E R L F A E E X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S T T S T T
S S T
S S S T T
T T S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G G G Y P R E R V I P E Q R N A R I L N E V K Q I T H N D L X T I L K I I D Q D F L K D T I S G K Y F Q E Y F F E N C Q D D E V A A Y L K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S G G G S
S
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	K	I	A	L	I	N	E	N	S	Q	A	S	K	N	H	I	I	Y	D	S	L	K	E	A	T	D	K	K	G	Y	Q	L	F	N	Y	G	X	R	G	E	E	G	E	S	Q	L	T	Y	V	Q	N	G	L	X	A	A	I	L	L	N	T	K	A	V	D	F	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	G	G	G																T							S			S		T	T																			T	T	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	C	G	T	G	V	G	A	X	L	A	L	N	S	F	P	G	V	V	C	G	L	A	V	D	P	T	D	A	Y	L	Y	S	Q	I	N	G	G	N	A	L	S	I	P	Y	A	K	G	F	G	W	G	A	E	L	T	L	K	L	X	F	E	R	L	F	A	E	E	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S								T	T	S	T	T							S	S											T			S						S	S	T	T			T	T														S	S		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	G	Y	P	R	E	R	V	I	P	E	Q	R	N	A	R	I	L	N	E	V	K	Q	I	T	H	N	D	L	X	T	I	L	K	I	I	D	Q	D	F	L	K	D	T	I	S	G	K	Y	F	Q	E	Y	F	F	E	N	C	Q	D	D	E	V	A	A	Y	L	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S	S	G	G	G																			S										S									S		S