Email l.a.kelley@imperial.ac.uk Description P15723 Date Thu Jan 5 11:34:52 GMT 2012 Unique Job ID 62d052af71b1f253

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3bg2A_ 100.0 32 PDB header:hydrolase Chain: A: PDB Molecule:dgtp triphosphohydrolase; PDBTitle: crystal structure of deoxyguanosinetriphosphate triphosphohydrolase2 from flavobacterium sp. med217 2 c2pgsA_ 100.0 36 PDB header:hydrolase Chain: A: PDB Molecule:putative deoxyguanosinetriphosphate triphosphohydrolase; PDBTitle: crystal structure of a putative deoxyguanosinetriphosphate2 triphosphohydrolase from pseudomonas syringae pv. phaseolicola 1448a 3 c2dqbB_ 100.0 31 PDB header:hydrolase, dna binding protein Chain: B: PDB Molecule:deoxyguanosinetriphosphate triphosphohydrolase, putative; PDBTitle: crystal structure of dntp triphosphohydrolase from thermus2 thermophilus hb8, which is homologous to dgtp triphosphohydrolase 4 d2heka1 100.0 15 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 5 c2o6iA_ 99.9 22 PDB header:hydrolase Chain: A: PDB Molecule:hd domain protein; PDBTitle: structure of an enterococcus faecalis hd domain phosphohydrolase 6 d2o6ia1 99.9 22 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 7 c3u1nC_ 99.9 21 PDB header:hydrolase Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: structure of the catalytic core of human samhd1 8 c2q14A_ 99.9 24 PDB header:hydrolase Chain: A: PDB Molecule:phosphohydrolase; PDBTitle: crystal structure of phosphohydrolase (bt4208) from bacteroides2 thetaiotaomicron vpi-5482 at 2.20 a resolution 9 c3ccgA_ 97.9 29 PDB header:hydrolase Chain: A: PDB Molecule:hd superfamily hydrolase; PDBTitle: crystal structure of predicted hd superfamily hydrolase involved in2 nad metabolism (np_347894.1) from clostridium acetobutylicum at 1.503 a resolution 10 c3gw7A_ 97.9 15 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein yedj; PDBTitle: crystal structure of a metal-dependent phosphohydrolase2 with conserved hd domain (yedj) from escherichia coli in3 complex with nickel ions. northeast structural genomics4 consortium target er63 11 c2ogiA_ 97.8 22 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein sag1661; PDBTitle: crystal structure of a putative metal dependent phosphohydrolase2 (sag1661) from streptococcus agalactiae serogroup v at 1.85 a3 resolution 12 c2o08B_ 97.7 25 PDB header:hydrolase Chain: B: PDB Molecule:bh1327 protein; PDBTitle: crystal structure of a putative hd superfamily hydrolase (bh1327) from2 bacillus halodurans at 1.90 a resolution 13 d2qgsa1 97.5 17 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 14 d2pq7a1 97.4 20 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 15 d3b57a1 97.1 19 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 16 d3djba1 97.0 17 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 17 c3m1tA_ 96.9 25 PDB header:hydrolase Chain: A: PDB Molecule:putative phosphohydrolase; PDBTitle: crystal structure of putative phosphohydrolase (yp_929327.1) from2 shewanella amazonensis sb2b at 1.62 a resolution 18 d2pjqa1 96.7 15 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 19 d3dtoa1 96.6 19 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 20 c3skdA_ 95.7 20 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein tthb187; PDBTitle: crystal structure of the thermus thermophilus cas3 hd domain in the2 presence of ni2+ 21 c2ounA_ not modelled 95.3 20 PDB header:hydrolase Chain: A: PDB Molecule:camp and camp-inhibited cgmp 3',5'-cyclic PDBTitle: crystal structure of pde10a2 in complex with amp 22 d3dy8a1 not modelled 95.1 16 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase 23 c3ecmA_ not modelled 95.1 28 PDB header:hydrolase Chain: A: PDB Molecule:high affinity camp-specific and ibmx-insensitive PDBTitle: crystal structure of the unliganded pde8a catalytic domain 24 c3i7aA_ not modelled 94.9 22 PDB header:hydrolase Chain: A: PDB Molecule:putative metal-dependent phosphohydrolase; PDBTitle: crystal structure of putative metal-dependent phosphohydrolase2 (yp_926882.1) from shewanella amazonensis sb2b at 2.06 a resolution 25 c1z1lA_ not modelled 94.9 19 PDB header:hydrolase Chain: A: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: the crystal structure of the phosphodiesterase 2a catalytic2 domain 26 c2o8hA_ not modelled 94.9 21 PDB header:hydrolase Chain: A: PDB Molecule:phosphodiesterase-10a; PDBTitle: crystal structure of the catalytic domain of rat2 phosphodiesterase 10a 27 c3qi4A_ not modelled 94.8 16 PDB header:hydrolase Chain: A: PDB Molecule:high affinity cgmp-specific 3',5'-cyclic phosphodiesterase PDBTitle: crystal structure of pde9a(q453e) in complex with ibmx 28 c2r8qA_ not modelled 94.8 19 PDB header:hydrolase Chain: A: PDB Molecule:class i phosphodiesterase pdeb1; PDBTitle: structure of lmjpdeb1 in complex with ibmx 29 c3ibjB_ not modelled 94.6 19 PDB header:hydrolase Chain: B: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: x-ray structure of pde2a 30 c1zklA_ not modelled 94.6 23 PDB header:hydrolase Chain: A: PDB Molecule:high-affinity camp-specific 3',5'-cyclic PDBTitle: multiple determinants for inhibitor selectivity of cyclic2 nucleotide phosphodiesterases 31 c3g3nA_ not modelled 94.6 23 PDB header:hydrolase Chain: A: PDB Molecule:high affinity camp-specific 3',5'-cyclic PDBTitle: pde7a catalytic domain in complex with 3-(2,6-2 difluorophenyl)-2-(methylthio)quinazolin-4(3h)-one 32 d1f0ja_ not modelled 94.5 16 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase 33 d1tbfa_ not modelled 94.5 21 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase 34 c1xozA_ not modelled 94.5 21 PDB header:hydrolase Chain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase; PDBTitle: catalytic domain of human phosphodiesterase 5a in complex2 with tadalafil 35 c3hc1A_ not modelled 94.4 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized hdod domain protein; PDBTitle: crystal structure of hdod domain protein with unknown function2 (np_953345.1) from geobacter sulfurreducens at 1.90 a resolution 36 d1y2ka1 not modelled 94.2 21 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase 37 d2h44a1 not modelled 94.2 18 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase 38 c1xotB_ not modelled 93.8 16 PDB header:hydrolase Chain: B: PDB Molecule:camp-specific 3',5'-cyclic phosphodiesterase 4b; PDBTitle: catalytic domain of human phosphodiesterase 4b in complex with2 vardenafil 39 c3bjcA_ not modelled 93.7 18 PDB header:hydrolase Chain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase; PDBTitle: crystal structure of the pde5a catalytic domain in complex2 with a novel inhibitor 40 c2cqzA_ not modelled 93.6 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:177aa long hypothetical protein; PDBTitle: crystal structure of ph0347 protein from pyrococcus horikoshii ot3 41 d1taza_ not modelled 93.5 14 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase 42 d1ynba1 not modelled 93.3 14 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 43 c3kq5A_ not modelled 93.2 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical cytosolic protein; PDBTitle: crystal structure of an uncharacterized protein from coxiella burnetii 44 d2paqa1 not modelled 92.5 23 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 45 c3memA_ not modelled 92.3 15 PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution 46 d1so2a_ not modelled 92.0 18 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase 47 c3mzoA_ not modelled 91.3 15 PDB header:hydrolase Chain: A: PDB Molecule:lin2634 protein; PDBTitle: crystal structure of a hd-domain phosphohydrolase (lin2634) from2 listeria innocua at 1.98 a resolution 48 d1vqra_ not modelled 90.8 11 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:modified HD domain 49 d1u6za1 not modelled 89.4 8 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:Ppx associated domain 50 d1xx7a_ not modelled 87.0 26 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 51 c2floA_ not modelled 84.1 8 PDB header:hydrolase Chain: A: PDB Molecule:exopolyphosphatase; PDBTitle: crystal structure of exopolyphosphatase (ppx) from e. coli o157:h7 52 c3m5fA_ not modelled 83.4 20 PDB header:hydrolase Chain: A: PDB Molecule:metal dependent phosphohydrolase; PDBTitle: structure of mj0384, a cas3 protein from methanocaldococcus jannaschii 53 c3ljvA_ not modelled 81.7 18 PDB header:transcription Chain: A: PDB Molecule:mmoq response regulator; PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m 54 c3kh1B_ not modelled 79.6 25 PDB header:hydrolase Chain: B: PDB Molecule:predicted metal-dependent phosphohydrolase; PDBTitle: crystal structure of predicted metal-dependent2 phosphohydrolase (zp_00055740.2) from magnetospirillum3 magnetotacticum ms-1 at 1.37 a resolution 55 c3hi0B_ not modelled 79.1 18 PDB header:hydrolase Chain: B: PDB Molecule:putative exopolyphosphatase; PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution 56 d2gz4a1 not modelled 69.0 20 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 57 c2zxqA_ not modelled 60.0 38 PDB header:hydrolase Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase; PDBTitle: crystal structure of endo-alpha-n-acetylgalactosaminidase2 from bifidobacterium longum (engbf) 58 c3ecqA_ not modelled 57.5 25 PDB header:hydrolase Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase; PDBTitle: endo-alpha-n-acetylgalactosaminidase from streptococcus pneumoniae:2 semet structure 59 d1vj7a1 not modelled 53.5 38 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain 60 c1aqjB_ not modelled 47.6 71 PDB header:methyltransferase Chain: B: PDB Molecule:adenine-n6-dna-methyltransferase taqi; PDBTitle: structure of adenine-n6-dna-methyltransferase taqi 61 d2ar0a1 not modelled 46.6 71 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like 62 c1vj7B_ not modelled 45.6 39 PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. 63 d2okca1 not modelled 42.6 71 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like 64 c1g38A_ not modelled 42.2 71 PDB header:transferase/dna Chain: A: PDB Molecule:modification methylase taqi; PDBTitle: adenine-specific methyltransferase m. taq i/dna complex 65 c3khkA_ not modelled 41.8 57 PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei. 66 d2f8la1 not modelled 38.9 43 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like 67 c3lkdB_ not modelled 36.7 43 PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 68 c3o5cA_ not modelled 33.1 32 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: cytochrome c peroxidase bccp of shewanella oneidensis 69 d1eb7a2 not modelled 32.3 18 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 70 d1b4ub_ not modelled 30.3 14 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 71 c3nr1A_ not modelled 29.2 16 PDB header:hydrolase Chain: A: PDB Molecule:hd domain-containing protein 3; PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses 72 c3nqwB_ not modelled 28.7 29 PDB header:hydrolase Chain: B: PDB Molecule:cg11900; PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses 73 d1iqca2 not modelled 25.9 29 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 74 c3ldgA_ not modelled 24.3 63 PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein smu.472; PDBTitle: crystal structure of smu.472, a putative methyltransferase complexed2 with sah 75 c2c1uB_ not modelled 23.5 23 PDB header:oxidoreductase Chain: B: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from paracoccus pantotrophus - oxidised form 76 c1nh1A_ not modelled 23.2 27 PDB header:avirulence protein Chain: A: PDB Molecule:avirulence b protein; PDBTitle: crystal structure of the type iii effector avrb from2 pseudomonas syringae. 77 d1nh1a_ not modelled 23.2 27 Fold:Antivirulence factor Superfamily:Antivirulence factor Family:Antivirulence factor 78 c3oa8B_ not modelled 21.8 35 PDB header:heme-binding protein/heme-binding protei Chain: B: PDB Molecule:soxx; PDBTitle: diheme soxax 79 c2xzn3_ not modelled 21.5 8 PDB header:ribosome Chain: 3: PDB Molecule:rps7e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 80 c3k0bA_ not modelled 20.9 50 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365 81 c2jqqA_ not modelled 20.6 12 PDB header:protein transport Chain: A: PDB Molecule:conserved oligomeric golgi complex subunit 2; PDBTitle: solution structure of saccharomyces cerevisiae conserved2 oligomeric golgi subunit 2 protein (cog2p) 82 d1nmla2 not modelled 17.8 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 83 c3lduA_ not modelled 17.3 63 PDB header:transferase Chain: A: PDB Molecule:putative methylase; PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630. 84 c1iqcB_ not modelled 17.3 21 PDB header:oxidoreductase Chain: B: PDB Molecule:di-heme peroxidase; PDBTitle: crystal structure of di-heme peroxidase from nitrosomonas europaea 85 c2kviA_ not modelled 17.2 13 PDB header:rna binding protein Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3; PDBTitle: structure of nab3 rrm 86 c2vhdB_ not modelled 16.4 18 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from pseudomonas aeruginosa - mixed valence form 87 c3p04B_ not modelled 16.3 25 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 88 c3p04A_ not modelled 16.1 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 89 c3zrgB_ not modelled 15.8 55 PDB header:protein binding Chain: B: PDB Molecule:pexrd2 family secreted rxlr effector peptide, putative; PDBTitle: crystal structure of rxlr effector pexrd2 from phytophthora infestans 90 c1ni3A_ not modelled 15.5 25 PDB header:hydrolase Chain: A: PDB Molecule:ychf gtp-binding protein; PDBTitle: structure of the schizosaccharomyces pombe ychf gtpase 91 d1wf2a_ not modelled 15.2 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 92 c2huoA_ not modelled 14.7 33 PDB header:oxidoreductase Chain: A: PDB Molecule:inositol oxygenase; PDBTitle: crystal structure of mouse myo-inositol oxygenase in complex with2 substrate 93 d3bxda1 not modelled 14.7 33 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:MioX-like 94 d2ibna1 not modelled 14.1 33 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:MioX-like 95 d1lghb_ not modelled 13.5 22 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 96 c1nmlA_ not modelled 13.2 21 PDB header:oxidoreductase Chain: A: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: di-haemic cytochrome c peroxidase from pseudomonas nautica 617, form2 in (ph 4.0) 97 d2ovra1 not modelled 13.1 25 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 98 c3k6jA_ not modelled 13.1 12 PDB header:oxidoreductase Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence; PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans 99 c3s1sA_ not modelled 12.5 43 PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi