Fold library entry viewer: c3ibjB_

Added to library: Sat Aug 28 23:06:03 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	T	D	R	D	R	K	I	L	Q	L	C	G	E	L	Y	D	L	D	A	S	S	L	Q	L	K	V	L	Q	Y	L	Q	Q	E	T	R	A	S	R	C	C	L	L	L	V	S	E	D	N	L	Q	L	S	C	K	V	I	G	D	K	V	L	G	E	E	V	S	F	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T															S																	T	T											T	T	S	S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	C	L	G	Q	V	V	E	D	K	K	S	I	Q	L	K	D	L	T	S	E	D	V	Q	Q	L	Q	S	M	L	G	C	E	L	Q	A	M	L	C	V	P	V	I	S	R	A	T	D	Q	V	V	A	L	A	C	A	F	N	K	L	E	G	D	L	F	T	D	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	T	T										T	T	S			S												S			S										S	S	S		S											S	S	S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	H	V	I	Q	H	C	F	H	Y	T	S	T	V	L	T	S	T	L	A	F	Q	K	E	Q	K	L	K	C	E	C	Q	A	L	L	Q	V	A	K	N	L	F	T	H	L	D	D	V	S	V	L	L	Q	E	I	I	T	E	A	R	N	L	S	N	A	E	I	C	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T														G	G	G	T	T																		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	L	L	D	Q	N	E	L	V	A	K	V	S	Y	E	I	R	I	P	A	D	Q	G	I	A	G	H	V	A	T	T	G	Q	I	L	N	I	P	D	A	Y	R	T	R	N	I	L	C	F	P	I	K	N	E	N	Q	E	V	I	G	V	A	E	L	V	N	K	I	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	B												B	T	T	S											S					S																S	S	S												S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	W	F	S	K	F	D	E	D	L	A	T	A	F	S	I	Y	C	G	I	S	I	A	H	S	L	L	Y	K	K	V	N	E	A	Q	Y	R	S	H	L	A	N	E	M	M	M	Y	H	M	K	V	S	D	D	E	Y	T	K	L	L	H	D	G	I	Q	P	V	A	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			T	T	T	T																																						T	T														S	S					G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	S	N	F	A	S	F	T	Y	T	P	R	S	L	P	E	D	D	T	S	M	A	I	L	S	M	L	Q	D	M	N	F	I	N	N	Y	K	I	D	C	P	T	L	A	R	F	C	L	M	V	K	K	G	Y	R	D	P	P	Y	H	N	W	M	H	A	F	S	V	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G	S	T	T			G	G	G	S		S	S	S											T	T	T						T																T					S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	C	Y	L	L	Y	K	N	L	E	L	T	N	Y	L	E	D	I	E	I	F	A	L	F	I	S	C	M	C	H	D	L	D	H	R	G	T	N	K	S	V	L	A	A	L	Y	S	S	E	G	S	V	M	E	R	H	H	F	A	Q	A	I	A	I	L	N	T	H	G	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	G	G	G	T	S															T	T	T	T									G	G	G	T	T	T		S	S	S															T	S	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	I	F	D	H	F	S	R	K	D	Y	Q	R	M	L	D	L	M	R	D	I	I	L	A	T	D	L	A	H	H	L	R	I	F	K	D	L	Q	K	M	A	E	V	G	Y	D	R	N	N	K	Q	H	H	R	L	L	L	C	L	L	M	T	S	C	D	L	S	D	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S	S																			T																		S				S	S																		T	G	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	G	W	K	T	T	R	K	I	A	E	L	I	Y	K	E	F	F	S	Q	G	D	L	E	K	A	M	D	R	E	K	A	Y	I	P	E	L	Q	I	S	F	M	E	H	I	A	M	P	I	Y	K	L	L	Q	D	L	F	P	K	A	A	E	L	Y	E	R	V	A	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																	S			S	S	T	T					T	T	S	T	T												T	T								T	T	T		G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.
Sequence	R	E	H	W	T	K	V	S	H	L	V	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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