Email l.a.kelley@imperial.ac.uk Description P0ADW3 Date Thu Jan 5 11:21:58 GMT 2012 Unique Job ID 3c126388d3dbe066

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1o5ha_ 84.6 14 Fold:Methenyltetrahydrofolate cyclohydrolase-like Superfamily:Methenyltetrahydrofolate cyclohydrolase-like Family:Methenyltetrahydrofolate cyclohydrolase-like 2 c1tt9B_ 77.1 12 PDB header:transferase, lyase Chain: B: PDB Molecule:formimidoyltransferase-cyclodeaminase PDBTitle: structure of the bifunctional and golgi associated2 formiminotransferase cyclodeaminase octamer 3 d2asra_ 55.7 8 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 4 d1vlta_ 54.4 16 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 5 c1p68A_ 49.8 14 PDB header:de novo protein Chain: A: PDB Molecule:de novo designed protein s-824; PDBTitle: solution structure of s-824, a de novo designed four helix2 bundle 6 c2d4yA_ 49.7 11 PDB header:structural protein Chain: A: PDB Molecule:flagellar hook-associated protein 1; PDBTitle: crystal structure of a 49k fragment of hap1 (flgk) 7 d1d2ta_ 49.7 25 Fold:Acid phosphatase/Vanadium-dependent haloperoxidase Superfamily:Acid phosphatase/Vanadium-dependent haloperoxidase Family:Type 2 phosphatidic acid phosphatase, PAP2 8 d2j0oa1 48.2 19 Fold:IpaD-like Superfamily:IpaD-like Family:IpaD-like 9 c2j0oA_ 48.2 19 PDB header:cell invasion Chain: A: PDB Molecule:invasin ipad; PDBTitle: shigella flexneri ipad 10 c2ym0B_ 46.3 6 PDB header:cell invasion Chain: B: PDB Molecule:cell invasion protein sipd; PDBTitle: truncated sipd from salmonella typhimurium 11 c2d4uA_ 43.5 15 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: crystal structure of the ligand binding domain of the bacterial serine2 chemoreceptor tsr 12 d1q90m_ 41.8 50 Fold:Single transmembrane helix Superfamily:PetM subunit of the cytochrome b6f complex Family:PetM subunit of the cytochrome b6f complex 13 d1oqwa_ 41.4 13 Fold:Pili subunits Superfamily:Pili subunits Family:Pilin 14 d2liga_ 39.9 16 Fold:Four-helical up-and-down bundle Superfamily:Aspartate receptor, ligand-binding domain Family:Aspartate receptor, ligand-binding domain 15 d2pila_ 37.6 8 Fold:Pili subunits Superfamily:Pili subunits Family:Pilin 16 c3kdpG_ 36.8 38 PDB header:hydrolase Chain: G: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a; PDBTitle: crystal structure of the sodium-potassium pump 17 c3kdpH_ 36.8 38 PDB header:hydrolase Chain: H: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a; PDBTitle: crystal structure of the sodium-potassium pump 18 c2zxeG_ 34.9 46 PDB header:hydrolase/transport protein Chain: G: PDB Molecule:phospholemman-like protein; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state 19 c1gk6B_ 33.9 16 PDB header:vimentin Chain: B: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b) 20 c3ipdB_ 32.2 14 PDB header:exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21 21 c1nfoA_ not modelled 30.4 24 PDB header:lipid transport Chain: A: PDB Molecule:apolipoprotein e2; PDBTitle: apolipoprotein e2 (apoe2, d154a mutation) 22 c2jo1A_ not modelled 30.0 38 PDB header:hydrolase regulator Chain: A: PDB Molecule:phospholemman; PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles 23 d1rhzb_ not modelled 28.3 20 Fold:Single transmembrane helix Superfamily:Preprotein translocase SecE subunit Family:Preprotein translocase SecE subunit 24 c1avoD_ not modelled 27.1 11 PDB header:proteasome activator Chain: D: PDB Molecule:11s regulator; PDBTitle: proteasome activator reg(alpha) 25 c2jp3A_ not modelled 27.0 15 PDB header:transcription Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4; PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles 26 c2xv5A_ not modelled 26.9 19 PDB header:structural protein Chain: A: PDB Molecule:lamin-a/c; PDBTitle: human lamin a coil 2b fragment 27 c2cpbA_ not modelled 26.1 24 PDB header:viral protein Chain: A: PDB Molecule:m13 major coat protein; PDBTitle: solution nmr structures of the major coat protein of2 filamentous bacteriophage m13 solubilized in3 dodecylphosphocholine micelles, 25 lowest energy structures 28 c1gk4A_ not modelled 25.9 26 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 29 c2k9yB_ not modelled 25.7 22 PDB header:transferase Chain: B: PDB Molecule:ephrin type-a receptor 2; PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0 30 c2gl2B_ not modelled 25.5 11 PDB header:cell adhesion Chain: B: PDB Molecule:adhesion a; PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada 31 d2jaaa1 not modelled 25.1 19 Fold:IpaD-like Superfamily:IpaD-like Family:IpaD-like 32 c2p7nA_ not modelled 25.0 6 PDB header:cell invasion Chain: A: PDB Molecule:pathogenicity island 1 effector protein; PDBTitle: crystal structure of the pathogenicity island 1 effector2 protein from chromobacterium violaceum. northeast3 structural genomics consortium (nesgc) target cvr69. 33 c3n23E_ not modelled 24.0 38 PDB header:hydrolase Chain: E: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a; PDBTitle: crystal structure of the high affinity complex between ouabain and the2 e2p form of the sodium-potassium pump 34 c2xdjF_ not modelled 23.9 20 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 35 d1f6ga_ not modelled 23.8 17 Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels 36 c2k9yA_ not modelled 22.3 22 PDB header:transferase Chain: A: PDB Molecule:ephrin type-a receptor 2; PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0 37 c2jwaA_ not modelled 19.3 21 PDB header:transferase Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2; PDBTitle: erbb2 transmembrane segment dimer spatial structure 38 d2axtj1 not modelled 19.1 33 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein J, PsbJ Family:PsbJ-like 39 c1ei3E_ not modelled 18.9 16 PDB header: PDB COMPND: 40 c1ei3C_ not modelled 18.5 11 PDB header: PDB COMPND: 41 c1pi7A_ not modelled 17.3 53 PDB header:viral protein Chain: A: PDB Molecule:vpu protein; PDBTitle: structure of the channel-forming trans-membrane domain of2 virus protein "u" (vpu) from hiv-1 42 c2gohA_ not modelled 17.3 53 PDB header:viral protein Chain: A: PDB Molecule:vpu protein; PDBTitle: three-dimensional structure of the trans-membrane domain of2 vpu from hiv-1 in aligned phospholipid bicelles 43 c2gofA_ not modelled 17.3 53 PDB header:viral protein Chain: A: PDB Molecule:vpu protein; PDBTitle: three-dimensional structure of the trans-membrane domain of2 vpu from hiv-1 in aligned phospholipid bicelles 44 c1pi8A_ not modelled 17.3 53 PDB header:viral protein Chain: A: PDB Molecule:vpu protein; PDBTitle: structure of the channel-forming trans-membrane domain of2 virus protein "u" (vpu) from hiv-1 45 c1pjeA_ not modelled 17.3 53 PDB header:viral protein Chain: A: PDB Molecule:vpu protein; PDBTitle: structure of the channel-forming trans-membrane domain of2 virus protein "u"(vpu) from hiv-1 46 c2wvrB_ not modelled 16.7 24 PDB header:replication Chain: B: PDB Molecule:geminin; PDBTitle: human cdt1:geminin complex 47 c3cvfA_ not modelled 16.5 32 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 48 d2nwwa1 not modelled 16.4 39 Fold:Proton glutamate symport protein Superfamily:Proton glutamate symport protein Family:Proton glutamate symport protein 49 c3sokB_ not modelled 16.3 11 PDB header:cell adhesion Chain: B: PDB Molecule:fimbrial protein; PDBTitle: dichelobacter nodosus pilin fima 50 c3b5nF_ not modelled 15.8 16 PDB header:membrane protein Chain: F: PDB Molecule:protein sso1; PDBTitle: structure of the yeast plasma membrane snare complex 51 c2ww9B_ not modelled 15.5 25 PDB header:ribosome Chain: B: PDB Molecule:protein transport protein sss1; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome 52 c1n7sB_ not modelled 15.4 14 PDB header:transport protein Chain: B: PDB Molecule:syntaxin 1a; PDBTitle: high resolution structure of a truncated neuronal snare2 complex 53 c2qdqA_ not modelled 15.1 26 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: crystal structure of the talin dimerisation domain 54 c2wwbB_ not modelled 14.5 20 PDB header:ribosome Chain: B: PDB Molecule:protein transport protein sec61 subunit gamma; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome 55 c3htuB_ not modelled 14.4 15 PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein-sorting-associated protein 20; PDBTitle: crystal structure of the human vps25-vps20 subcomplex 56 c2ym9C_ not modelled 13.7 6 PDB header:cell invasion Chain: C: PDB Molecule:cell invasion protein sipd; PDBTitle: sipd from salmonella typhimurium 57 d1kpla_ not modelled 13.7 18 Fold:Clc chloride channel Superfamily:Clc chloride channel Family:Clc chloride channel 58 c2npsB_ not modelled 13.5 16 PDB header:transport protein Chain: B: PDB Molecule:syntaxin 13; PDBTitle: crystal structure of the early endosomal snare complex 59 d1k1fa_ not modelled 12.9 27 Fold:Bcr-Abl oncoprotein oligomerization domain Superfamily:Bcr-Abl oncoprotein oligomerization domain Family:Bcr-Abl oncoprotein oligomerization domain 60 c2jpxA_ not modelled 12.7 50 PDB header:viral protein Chain: A: PDB Molecule:vpu protein; PDBTitle: a18h vpu tm structure in lipid bilayers 61 c2x2vG_ not modelled 12.6 13 PDB header:membrane protein Chain: G: PDB Molecule:atp synthase subunit c; PDBTitle: structural basis of a novel proton-coordination type in an2 f1fo-atp synthase rotor ring 62 c3cveC_ not modelled 12.6 30 PDB header:signaling protein Chain: C: PDB Molecule:homer protein homolog 1; PDBTitle: crystal structure of the carboxy terminus of homer1 63 c2zt9E_ not modelled 12.3 18 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120 64 c2hg5D_ not modelled 12.0 22 PDB header:membrane protein Chain: D: PDB Molecule:kcsa channel; PDBTitle: cs+ complex of a k channel with an amide to ester substitution in the2 selectivity filter 65 c1sfcJ_ not modelled 11.9 11 PDB header:transport protein Chain: J: PDB Molecule:protein (syntaxin 1a); PDBTitle: neuronal synaptic fusion complex 66 c1lwuH_ not modelled 11.9 10 PDB header:blood clotting Chain: H: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of fragment d from lamprey fibrinogen complexed with2 the peptide gly-his-arg-pro-amide 67 c2akcC_ not modelled 11.8 25 PDB header:hydrolase Chain: C: PDB Molecule:class a nonspecific acid phosphatase phon; PDBTitle: crystal structure of tungstate complex of the phon protein2 from s. typhimurium 68 c2vv5D_ not modelled 11.5 15 PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs 69 c2qsgX_ not modelled 11.1 21 PDB header:dna binding protein/dna Chain: X: PDB Molecule:uv excision repair protein rad23; PDBTitle: crystal structure of rad4-rad23 bound to a uv-damaged dna 70 d1x3zb1 not modelled 11.1 21 Fold:XPC-binding domain Superfamily:XPC-binding domain Family:XPC-binding domain 71 d1otsa_ not modelled 10.9 18 Fold:Clc chloride channel Superfamily:Clc chloride channel Family:Clc chloride channel 72 d1rh5b_ not modelled 10.7 20 Fold:Single transmembrane helix Superfamily:Preprotein translocase SecE subunit Family:Preprotein translocase SecE subunit 73 c1x8yA_ not modelled 10.7 18 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 74 c1wu0A_ not modelled 10.6 24 PDB header:hydrolase Chain: A: PDB Molecule:atp synthase c chain; PDBTitle: solution structure of subunit c of f1fo-atp synthase from2 the thermophilic bacillus ps3 75 c2ks1B_ not modelled 10.6 44 PDB header:transferase Chain: B: PDB Molecule:epidermal growth factor receptor; PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation 76 c1deqO_ not modelled 10.5 12 PDB header: PDB COMPND: 77 c3ck6E_ not modelled 10.5 8 PDB header:structural protein Chain: E: PDB Molecule:putative membrane transport protein; PDBTitle: crystal structure of zntb cytoplasmic domain from vibrio2 parahaemolyticus rimd 2210633 78 c2hacA_ not modelled 10.2 18 PDB header:membrane protein Chain: A: PDB Molecule:t-cell surface glycoprotein cd3 zeta chain; PDBTitle: structure of zeta-zeta transmembrane dimer 79 d1zuja1 not modelled 9.4 19 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 80 d2r6gf2 not modelled 8.9 16 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 81 c1fmhA_ not modelled 8.8 20 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper 82 d1q90b_ not modelled 8.4 25 Fold:Heme-binding four-helical bundle Superfamily:Transmembrane di-heme cytochromes Family:Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 83 c1iflA_ not modelled 8.4 28 PDB header:virus Chain: A: PDB Molecule:inovirus; PDBTitle: molecular models and structural comparisons of native and2 mutant class i filamentous bacteriophages ff (fd, f1, m13),3 if1 and ike 84 d1befa_ not modelled 8.3 50 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 85 c2oarA_ not modelled 8.2 20 PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl) 86 c3jycA_ not modelled 8.1 22 PDB header:metal transport Chain: A: PDB Molecule:inward-rectifier k+ channel kir2.2; PDBTitle: crystal structure of the eukaryotic strong inward-rectifier2 k+ channel kir2.2 at 3.1 angstrom resolution 87 c3lkwA_ not modelled 8.0 30 PDB header:viral protein,hydrolase Chain: A: PDB Molecule:fusion protein of nonstructural protein 2b and PDBTitle: crystal structure of dengue virus 1 ns2b/ns3 protease active2 site mutant 88 c2kncB_ not modelled 7.7 18 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 89 d2ijob1 not modelled 7.5 40 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 90 d2fomb1 not modelled 7.5 50 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 91 d1q90l_ not modelled 7.5 24 Fold:Single transmembrane helix Superfamily:PetL subunit of the cytochrome b6f complex Family:PetL subunit of the cytochrome b6f complex 92 c1q90L_ not modelled 7.5 24 PDB header:photosynthesis Chain: L: PDB Molecule:cytochrome b6f complex subunit petl; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii 93 d1c99a_ not modelled 7.4 21 Fold:Transmembrane helix hairpin Superfamily:F1F0 ATP synthase subunit C Family:F1F0 ATP synthase subunit C 94 d1v54b2 not modelled 7.4 14 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 95 d2axti1 not modelled 7.2 15 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein I, PsbI Family:PsbI-like 96 c2e74E_ not modelled 7.1 26 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus 97 c1vf5E_ not modelled 7.1 26 PDB header:photosynthesis Chain: E: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 98 c1vf5R_ not modelled 7.1 26 PDB header:photosynthesis Chain: R: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 99 c2e75E_ not modelled 7.1 26 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus