PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ck6E_

Fold library id	PDB Header	Molecule	Title
c3ck6E_	PDB header: structural protein	Chain: E: PDB Molecule: putative membrane transport protein;	PDBTitle: crystal structure of zntb cytoplasmic domain from vibrio2 parahaemolyticus rimd 2210633

Links to external resources
Added to library: Tue Mar 16 13:06:34 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X G F X I E H W D F S T P X A T Q E T T T A E H I Q P N H W Y H C E R L H P D I R G W L E D N H V P R A T V D H L L A D E S R P S F H P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S S
S
T T T T
T T T T
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D D D N F X L I L R G I N X N E N A S P E D X L S I R I L Y F Q G A L I S T R K I P S R A I X E I R Q A L A E H K G P K S L A S L L N Q I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S T T S
T T S
T T S S
T T
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E G L N G K I D L Y L D T I E E T L N E F D V N D E S T Y N H I A A Q K A L I S I K R F I R P Q Q Y A I R D L I E S E S E L V T S R P H Q Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
G G G
T T
T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . .

Sequence R F A H N N I T R I N E T I E F Y L G E V A L F Q D E I K H N R D E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	G	F	X	I	E	H	W	D	F	S	T	P	X	A	T	Q	E	T	T	T	A	E	H	I	Q	P	N	H	W	Y	H	C	E	R	L	H	P	D	I	R	G	W	L	E	D	N	H	V	P	R	A	T	V	D	H	L	L	A	D	E	S	R	P	S	F	H	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S								S	S	S	S							S						T	T							T	T		T	T								T	T										T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	D	D	N	F	X	L	I	L	R	G	I	N	X	N	E	N	A	S	P	E	D	X	L	S	I	R	I	L	Y	F	Q	G	A	L	I	S	T	R	K	I	P	S	R	A	I	X	E	I	R	Q	A	L	A	E	H	K	G	P	K	S	L	A	S	L	L	N	Q	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T												S	T	T	S		T	T	S										T	T							S	S														T	T		S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	G	L	N	G	K	I	D	L	Y	L	D	T	I	E	E	T	L	N	E	F	D	V	N	D	E	S	T	Y	N	H	I	A	A	Q	K	A	L	I	S	I	K	R	F	I	R	P	Q	Q	Y	A	I	R	D	L	I	E	S	E	S	E	L	V	T	S	R	P	H	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T			T	T		G	G	G																														T	T						T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Sequence	R	F	A	H	N	N	I	T	R	I	N	E	T	I	E	F	Y	L	G	E	V	A	L	F	Q	D	E	I	K	H	N	R	D	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)