Email l.a.kelley@imperial.ac.uk Description P0A734 Date Thu Jan 5 11:04:41 GMT 2012 Unique Job ID 31a6e382fb701276

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2kxoA_ 100.0 42 PDB header:cell cycle Chain: A: PDB Molecule:cell division topological specificity factor; PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae 2 c3r9jD_ 99.9 99 PDB header:cell cycle,hydrolase/cell cycle Chain: D: PDB Molecule:cell division topological specificity factor; PDBTitle: 4.3a resolution structure of a mind-mine(i24n) protein complex 3 d1ev0a_ 99.6 100 Fold:Cell division protein MinE topological specificity domain Superfamily:Cell division protein MinE topological specificity domain Family:Cell division protein MinE topological specificity domain 4 c3ku7B_ 98.8 33 PDB header:cell cycle Chain: B: PDB Molecule:cell division topological specificity factor; PDBTitle: crystal structure of helicobacter pylori mine, a cell division2 topological specificity factor 5 c3r9iG_ 88.6 100 PDB header:cell cycle,hydrolase/cell cycle Chain: G: PDB Molecule:cell division topological specificity factor; PDBTitle: 2.6a resolution structure of mind complexed with mine (12-31) peptide 6 c3r9iH_ 85.9 100 PDB header:cell cycle,hydrolase/cell cycle Chain: H: PDB Molecule:cell division topological specificity factor; PDBTitle: 2.6a resolution structure of mind complexed with mine (12-31) peptide 7 c3r9iE_ 85.9 100 PDB header:cell cycle,hydrolase/cell cycle Chain: E: PDB Molecule:cell division topological specificity factor; PDBTitle: 2.6a resolution structure of mind complexed with mine (12-31) peptide 8 c3r9iF_ 85.9 100 PDB header:cell cycle,hydrolase/cell cycle Chain: F: PDB Molecule:cell division topological specificity factor; PDBTitle: 2.6a resolution structure of mind complexed with mine (12-31) peptide 9 c2kwpA_ 75.9 17 PDB header:transcription Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: solution structure of the aminoterminal domain of e. coli nusa 10 d1hh2p4 74.7 21 Fold:Transcription factor NusA, N-terminal domain Superfamily:Transcription factor NusA, N-terminal domain Family:Transcription factor NusA, N-terminal domain 11 c3epsB_ 55.7 22 PDB header:transferase, hydrolase Chain: B: PDB Molecule:isocitrate dehydrogenase kinase/phosphatase; PDBTitle: the crystal structure of isocitrate dehydrogenase kinase/phosphatase2 from e. coli 12 d2r40d1 36.5 16 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 13 d1vmaa1 33.7 16 Fold:Four-helical up-and-down bundle Superfamily:Domain of the SRP/SRP receptor G-proteins Family:Domain of the SRP/SRP receptor G-proteins 14 c1rwuA_ 31.6 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0250 protein ybed; PDBTitle: solution structure of conserved protein ybed from e. coli 15 d1rwua_ 31.6 20 Fold:Ferredoxin-like Superfamily:YbeD/HP0495-like Family:YbeD-like 16 d2qw4a1 31.4 19 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 17 c2nxxG_ 30.9 22 PDB header:hormone/growth factor Chain: G: PDB Molecule:ecdysone receptor (ecr, nrh1); PDBTitle: crystal structure of the ligand-binding domains of the2 t.castaneum (coleoptera) heterodimer ecrusp bound to3 ponasterone a 18 c3ctbA_ 28.7 16 PDB header:transcription, transferase Chain: A: PDB Molecule:pregnane x receptor, linker, steroid receptor PDBTitle: tethered pxr-lbd/src-1p apoprotein 19 d1ovle_ 22.5 19 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 20 c1nrlA_ 21.9 16 PDB header:transcription Chain: A: PDB Molecule:orphan nuclear receptor pxr; PDBTitle: crystal structure of the human pxr-lbd in complex with an2 src-1 coactivator peptide and sr12813 21 d1nrla_ not modelled 21.9 16 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 22 d1nq7a_ not modelled 21.6 19 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 23 c3hm5A_ not modelled 21.4 14 PDB header:transcription Chain: A: PDB Molecule:dna methyltransferase 1-associated protein 1; PDBTitle: sant domain of human dna methyltransferase 1 associated2 protein 1 24 d1d0qa_ not modelled 20.2 32 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:DNA primase zinc finger 25 c1z5xE_ not modelled 20.1 22 PDB header:hormone/growth factor receptor Chain: E: PDB Molecule:ecdysone receptor ligand binding domain; PDBTitle: hemipteran ecdysone receptor ligand-binding domain2 complexed with ponasterone a 26 c3pvpA_ not modelled 20.0 17 PDB header:dna binding protein/dna Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna 27 d1j1va_ not modelled 19.5 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:TrpR-like Family:Chromosomal replication initiation factor DnaA C-terminal domain IV 28 d1go3f_ not modelled 19.3 33 Fold:SAM domain-like Superfamily:HRDC-like Family:RNA polymerase II subunit RBP4 (RpoF) 29 c2dnwA_ not modelled 18.4 32 PDB header:transport protein Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of rsgi ruh-059, an acp domain of acyl2 carrier protein, mitochondrial [precursor] from human cdna 30 d1ovla_ not modelled 17.8 19 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 31 d1pdua_ not modelled 17.6 22 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 32 d1n83a_ not modelled 17.4 16 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 33 c2qw4D_ not modelled 17.3 19 PDB header:hormone receptor Chain: D: PDB Molecule:orphan nuclear receptor nr4a1; PDBTitle: human nr4a1 ligand-binding domain 34 c1xdkF_ not modelled 16.1 22 PDB header:hormone/growth factor receptor Chain: F: PDB Molecule:retinoic acid receptor, beta; PDBTitle: crystal structure of the rarbeta/rxralpha ligand binding2 domain heterodimer in complex with 9-cis retinoic acid and3 a fragment of the trap220 coactivator 35 d1pq9a_ not modelled 15.8 22 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 36 d1osva_ not modelled 15.1 19 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 37 d1nava_ not modelled 13.6 13 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 38 d1l8qa1 not modelled 13.6 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:TrpR-like Family:Chromosomal replication initiation factor DnaA C-terminal domain IV 39 c3up0A_ not modelled 13.1 6 PDB header:steroid binding protein/transcription Chain: A: PDB Molecule:acedaf-12; PDBTitle: nuclear receptor daf-12 from hookworm ancylostoma ceylanicum in2 complex with (25s)-delta7-dafachronic acid 40 c3pt8B_ not modelled 13.1 7 PDB header:oxygen transport Chain: B: PDB Molecule:hemoglobin iii; PDBTitle: structure of hbii-iii-cn from lucina pectinata at ph 5.0 41 c2c0kB_ not modelled 13.0 19 PDB header:oxygen transport Chain: B: PDB Molecule:hemoglobin; PDBTitle: the structure of hemoglobin from the botfly gasterophilus2 intestinalis 42 c3l0jA_ not modelled 12.6 13 PDB header:transcription Chain: A: PDB Molecule:nuclear receptor ror-gamma; PDBTitle: crystal structure of orphan nuclear receptor rorgamma in complex with2 natural ligand 43 c2rhfA_ not modelled 12.4 14 PDB header:hydrolase Chain: A: PDB Molecule:dna helicase recq; PDBTitle: d. radiodurans recq hrdc domain 3 44 d1ie9a_ not modelled 12.4 13 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 45 c2hc4A_ not modelled 12.1 13 PDB header:gene regulation Chain: A: PDB Molecule:vitamin d receptor; PDBTitle: crystal structure of the lbd of vdr of danio rerio in2 complex with calcitriol 46 d1ghha_ not modelled 11.6 18 Fold:DNA damage-inducible protein DinI Superfamily:DNA damage-inducible protein DinI Family:DNA damage-inducible protein DinI 47 d1sqna_ not modelled 11.2 6 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 48 c2oaxC_ not modelled 10.7 10 PDB header:transcription Chain: C: PDB Molecule:mineralocorticoid receptor; PDBTitle: crystal structure of the s810l mutant mineralocorticoid2 receptor associated with sc9420 49 c3lbdA_ not modelled 10.6 22 PDB header:nuclear receptor Chain: A: PDB Molecule:retinoic acid receptor gamma; PDBTitle: ligand-binding domain of the human retinoic acid receptor2 gamma bound to 9-cis retinoic acid 50 d1x9fb_ not modelled 10.5 21 Fold:Globin-like Superfamily:Globin-like Family:Globins 51 c3vhuA_ not modelled 10.4 10 PDB header:transcription/inhibitor Chain: A: PDB Molecule:mineralocorticoid receptor; PDBTitle: mineralocorticoid receptor ligand-binding domain with spironolactone 52 c1p93A_ not modelled 10.4 6 PDB header:hormone receptor Chain: A: PDB Molecule:glucocorticoid receptor; PDBTitle: crystal structure of the agonist form of glucocorticoid2 receptor 53 c2o4rA_ not modelled 10.0 13 PDB header:hormone/growth factor receptor Chain: A: PDB Molecule:vitamin d3 receptor; PDBTitle: crystal structure of rat vitamin d receptor ligand binding2 domain complexed with vitiii 17-20e and the nr2 box of3 drip 205 54 c3gdzA_ not modelled 9.5 11 PDB header:ligase Chain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: crystal structure of arginyl-trna synthetase from klebsiella2 pneumoniae subsp. pneumoniae 55 d1xapa_ not modelled 8.9 22 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 56 d1xvpb_ not modelled 8.8 13 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 57 d3proc1 not modelled 8.6 18 Fold:Alpha-lytic protease prodomain-like Superfamily:Alpha-lytic protease prodomain Family:Alpha-lytic protease prodomain 58 d1itha_ not modelled 8.5 23 Fold:Globin-like Superfamily:Globin-like Family:Globins 59 c2olpB_ not modelled 8.5 5 PDB header:oxygen storage/transport Chain: B: PDB Molecule:hemoglobin ii; PDBTitle: structure and ligand selection of hemoglobin ii from lucina pectinata 60 c3ifeA_ not modelled 8.4 26 PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'. 61 c3abfB_ not modelled 8.2 21 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242) 62 d2zmia1 not modelled 8.2 13 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 63 d2b50a1 not modelled 8.2 15 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 64 c3q9qB_ not modelled 7.8 29 PDB header:chaperone Chain: B: PDB Molecule:heat shock protein beta-1; PDBTitle: hspb1 fragment second crystal form 65 d1mbaa_ not modelled 7.7 9 Fold:Globin-like Superfamily:Globin-like Family:Globins 66 d2ia7a1 not modelled 7.4 11 Fold:gpW/gp25-like Superfamily:gpW/gp25-like Family:gpW/gp25-like 67 d2dgxa1 not modelled 7.1 15 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 68 c2x4kB_ not modelled 7.0 15 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa) 69 c1usdA_ not modelled 6.9 21 PDB header:signaling protein Chain: A: PDB Molecule:vasodilator-stimulated phosphoprotein; PDBTitle: human vasp tetramerisation domain l352m 70 c2rqlA_ not modelled 6.7 8 PDB header:translation Chain: A: PDB Molecule:probable sigma-54 modulation protein; PDBTitle: solution structure of the e. coli ribosome hibernation2 promoting factor hpf 71 c3mb2G_ not modelled 6.7 6 PDB header:isomerase Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily 72 d1bjpa_ not modelled 6.4 15 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 73 d1wuda1 not modelled 6.3 21 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 74 d1lhta_ not modelled 6.2 20 Fold:Globin-like Superfamily:Globin-like Family:Globins 75 d1vkua_ not modelled 6.2 22 Fold:Acyl carrier protein-like Superfamily:ACP-like Family:Acyl-carrier protein (ACP) 76 c3idwA_ not modelled 6.2 15 PDB header:endocytosis Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1; PDBTitle: crystal structure of sla1 homology domain 2 77 c2zs0A_ not modelled 6.1 11 PDB header:oxygen storage, oxygen transport Chain: A: PDB Molecule:extracellular giant hemoglobin major globin subunit a1; PDBTitle: structural basis for the heterotropic and homotropic interactions of2 invertebrate giant hemoglobin 78 c2iz2A_ not modelled 6.1 9 PDB header:dna binding protein Chain: A: PDB Molecule:nuclear hormone receptor ftz-f1; PDBTitle: crystal structure of the ligand binding domain of fushi2 tarazu factor 1 from drosophila melanogaster 79 d2fvja1 not modelled 6.0 11 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 80 d1oj6a_ not modelled 5.9 9 Fold:Globin-like Superfamily:Globin-like Family:Globins 81 c2yruA_ not modelled 5.8 7 PDB header:apoptosis Chain: A: PDB Molecule:steroid receptor rna activator 1; PDBTitle: solution structure of mouse steroid receptor rna activator2 1 (sra1) protein 82 d1d02a_ not modelled 5.8 28 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease MunI 83 d2qssa1 not modelled 5.8 11 Fold:Globin-like Superfamily:Globin-like Family:Globins 84 c3tqmD_ not modelled 5.7 19 PDB header:protein binding Chain: D: PDB Molecule:ribosome-associated factor y; PDBTitle: structure of an ribosomal subunit interface protein from coxiella2 burnetii 85 c2ehtA_ not modelled 5.5 24 PDB header:lipid transport Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: crystal structure of acyl carrier protein from aquifex aeolicus (form2 2) 86 d1sctb_ not modelled 5.5 10 Fold:Globin-like Superfamily:Globin-like Family:Globins 87 d1l4sa_ not modelled 5.5 10 Fold:Ribosome binding protein Y (YfiA homologue) Superfamily:Ribosome binding protein Y (YfiA homologue) Family:Ribosome binding protein Y (YfiA homologue) 88 c2op8A_ not modelled 5.4 15 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase 89 d1t7ra_ not modelled 5.4 6 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 90 c2qnwA_ not modelled 5.3 13 PDB header:signaling protein Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: toxoplasma gondii apicoplast-targeted acyl carrier protein 91 d2qssb1 not modelled 5.3 6 Fold:Globin-like Superfamily:Globin-like Family:Globins 92 c3gyuA_ not modelled 5.2 10 PDB header:transcription Chain: A: PDB Molecule:nuclear hormone receptor of the steroid/thyroid PDBTitle: nuclear receptor daf-12 from parasitic nematode2 strongyloides stercoralis in complex with its physiological3 ligand dafachronic acid delta 7 93 d1v4wb_ not modelled 5.1 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 94 d2htja1 not modelled 5.1 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:FaeA-like 95 d1fsla_ not modelled 5.1 10 Fold:Globin-like Superfamily:Globin-like Family:Globins 96 c2zufA_ not modelled 5.0 12 PDB header:ligase/rna Chain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: crystal structure of pyrococcus horikoshii arginyl-trna2 synthetase complexed with trna(arg)