PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2o4rA_

Fold library id	PDB Header	Molecule	Title
c2o4rA_	PDB header: hormone/growth factor receptor	Chain: A: PDB Molecule: vitamin d3 receptor;	PDBTitle: crystal structure of rat vitamin d receptor ligand binding2 domain complexed with vitiii 17-20e and the nr2 box of3 drip 205

Links to external resources
Added to library: Tue Mar 16 14:28:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K L S E E Q Q H I I A I L L D A H H K T Y D P T Y A D F R D F R P P V R M P L S M L P H L A D L V S Y S I Q K V I G F A K M I P G F R D L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G G G S
T T T S T T G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S D D Q I V L L K S S A I E V I M L R S N Q S F T M D D M S W D C G S Q D Y K Y D V T D V S K A G H T L E L I E P L I K F Q V G L K K L N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T T T T
S S G G G
T T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H E E E H V L L M A I C I V S P D R P G V Q D A K L V E A I Q D R L S N T L Q T Y I R C R H P P P G S H Q L Y A K M I Q K L A D L R S L N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S T T
S
S
T T T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence E H S K Q Y R S L S F Q P E N S M K L T P L V L E V F G N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	L	S	E	E	Q	Q	H	I	I	A	I	L	L	D	A	H	H	K	T	Y	D	P	T	Y	A	D	F	R	D	F	R	P	P	V	R	M	P	L	S	M	L	P	H	L	A	D	L	V	S	Y	S	I	Q	K	V	I	G	F	A	K	M	I	P	G	F	R	D	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T		G	G	G	G	G	S									T	T																					T	S	T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	D	D	Q	I	V	L	L	K	S	S	A	I	E	V	I	M	L	R	S	N	Q	S	F	T	M	D	D	M	S	W	D	C	G	S	Q	D	Y	K	Y	D	V	T	D	V	S	K	A	G	H	T	L	E	L	I	E	P	L	I	K	F	Q	V	G	L	K	K	L	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G	T			T	T	T	T					S	S	G	G	G									T	T	T																			T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	E	E	E	H	V	L	L	M	A	I	C	I	V	S	P	D	R	P	G	V	Q	D	A	K	L	V	E	A	I	Q	D	R	L	S	N	T	L	Q	T	Y	I	R	C	R	H	P	P	P	G	S	H	Q	L	Y	A	K	M	I	Q	K	L	A	D	L	R	S	L	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S		T	T	S	T	T		S																								S		T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	E	H	S	K	Q	Y	R	S	L	S	F	Q	P	E	N	S	M	K	L	T	P	L	V	L	E	V	F	G	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S					T	T	S