Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	Q	L	N	K	V	L	K	G	L	M	I	A	L	P	V	M	A	I	A	A	C	S	S	N	K	N	A	S	N	D	G	S	E	G	M	L	G	A	G	T	G	M	D	A	N	G	G	N	G	N	M	S	S	E	E	Q	A	R	L
Secondary structure
SS confidence
Disorder		?	?	?																	?			?	?	?	?	?	?	?	?	?	?	?	?	?			?	?	?		?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		Q	M	Q	Q	L	Q	Q	N	N	I	V	Y	F	D	L	D	K	Y	D	I	R	S	D	F	A	Q	M	L	D	A	H	A	N	F	L	R	S	N	P	S	Y	K	V	T	V	E	G	H	A	D	E	R	G	T	P	E	Y	N	I	S
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?											?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Sequence		L	G	E	R	R	A	N	A	V	K	M	Y	L	Q	G	K	G	V	S	A	D	Q	I	S	I	V	S	Y	G	K	E	K	P	A	V	L	G	H	D	E	A	A	Y	S	K	N	R	R	A	V	L	V	Y
Secondary structure
SS confidence
Disorder																								?				?	?																								?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2l26 chain A Region: 41 - 172 Aligned: 132 Modelled: 132 Confidence: 100.0% Identity: 24% PDB header:membrane protein Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922; PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains Phyre2 PDB 2aiz chain P domain 1 Region: 40 - 173 Aligned: 134 Modelled: 134 Confidence: 100.0% Identity: 55% Fold: Bacillus chorismate mutase-like Superfamily: OmpA-like Family: OmpA-like Phyre2 PDB 2hqs chain C domain 1 Region: 68 - 173 Aligned: 106 Modelled: 106 Confidence: 100.0% Identity: 100% Fold: Bacillus chorismate mutase-like Superfamily: OmpA-like Family: OmpA-like Phyre2 PDB 2kgw chain A Region: 46 - 172 Aligned: 127 Modelled: 127 Confidence: 100.0% Identity: 25% PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: solution structure of the carboxy-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis Phyre2 PDB 3khn chain B Region: 65 - 172 Aligned: 108 Modelled: 108 Confidence: 100.0% Identity: 17% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:motb protein, putative; PDBTitle: crystal structure of putative motb like protein dvu_22282 from desulfovibrio vulgaris. Phyre2 PDB 2k1s chain A Region: 50 - 172 Aligned: 123 Modelled: 123 Confidence: 100.0% Identity: 24% PDB header:lipoprotein Chain: A: PDB Molecule:inner membrane lipoprotein yiad; PDBTitle: solution nmr structure of the folded c-terminal fragment of yiad from2 escherichia coli. northeast structural genomics consortium target3 er553. Phyre2 PDB 3td4 chain D Region: 63 - 172 Aligned: 110 Modelled: 110 Confidence: 100.0% Identity: 25% PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate Phyre2 PDB 3cyq chain M Region: 69 - 173 Aligned: 105 Modelled: 105 Confidence: 100.0% Identity: 24% PDB header:membrane protein Chain: M: PDB Molecule:chemotaxis protein motb; PDBTitle: the crystal structure of the complex of the c-terminal domain of2 helicobacter pylori motb (residues 125-256) with n-acetylmuramic acid Phyre2 PDB 1r1m chain A Region: 63 - 173 Aligned: 111 Modelled: 111 Confidence: 100.0% Identity: 34% PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein class 4; PDBTitle: structure of the ompa-like domain of rmpm from neisseria2 meningitidis Phyre2 PDB 1r1m chain A Region: 63 - 173 Aligned: 111 Modelled: 111 Confidence: 100.0% Identity: 34% Fold: Bacillus chorismate mutase-like Superfamily: OmpA-like Family: OmpA-like Phyre2 PDB 2zvy chain B Region: 67 - 173 Aligned: 104 Modelled: 107 Confidence: 100.0% Identity: 23% PDB header:membrane protein Chain: B: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form ii) Phyre2 PDB 3ldt chain A Region: 53 - 173 Aligned: 118 Modelled: 121 Confidence: 99.9% Identity: 16% PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein, ompa family protein; PDBTitle: crystal structure of an outer membrane protein(ompa)from2 legionella pneumophila Phyre2 PDB 3oon chain A Region: 55 - 173 Aligned: 108 Modelled: 119 Confidence: 99.9% Identity: 28% PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein (tpn50); PDBTitle: the structure of an outer membrance protein from borrelia burgdorferi2 b31 Phyre2 PDB 2zov chain A Region: 71 - 172 Aligned: 91 Modelled: 102 Confidence: 99.9% Identity: 26% PDB header:membrane protein Chain: A: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form i) Phyre2 PDB 2zf8 chain A Region: 70 - 160 Aligned: 83 Modelled: 91 Confidence: 99.8% Identity: 27% PDB header:structural protein Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor; PDBTitle: crystal structure of moty Phyre2 PDB 2r6h chain C Region: 126 - 149 Aligned: 24 Modelled: 24 Confidence: 48.4% Identity: 38% PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:ubiquinone oxidoreductase, na translocating, f PDBTitle: crystal structure of the domain comprising the nad binding and the fad2 binding regions of the nadh:ubiquinone oxidoreductase, na3 translocating, f subunit from porphyromonas gingivalis Phyre2 PDB 1gvh chain A domain 3 Region: 126 - 152 Aligned: 27 Modelled: 27 Confidence: 45.4% Identity: 22% Fold: Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain Family: Flavohemoglobin, C-terminal domain Phyre2 PDB 1gvh chain A Region: 127 - 152 Aligned: 26 Modelled: 26 Confidence: 37.0% Identity: 23% PDB header:oxidoreductase Chain: A: PDB Molecule:flavohemoprotein; PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket Phyre2 PDB 1tia chain A Region: 85 - 147 Aligned: 52 Modelled: 63 Confidence: 36.8% Identity: 27% Fold: alpha/beta-Hydrolases Superfamily: alpha/beta-Hydrolases Family: Fungal lipases Phyre2 PDB 3ngm chain B Region: 84 - 150 Aligned: 53 Modelled: 67 Confidence: 34.8% Identity: 36% PDB header:hydrolase Chain: B: PDB Molecule:extracellular lipase; PDBTitle: crystal structure of lipase from gibberella zeae Phyre2 1 c2l26A_ 2 d2aizp1 3 d2hqsc1 4 c2kgwA_ 5 c3khnB_ 6 c2k1sA_ 7 c3td4D_ 8 c3cyqM_ 9 c1r1mA_ 10 d1r1ma_ 11 c2zvyB_ 12 c3ldtA_ 13 c3oonA_ 14 c2zovA_ 15 c2zf8A_ 16 c2r6hC_ 17 d1gvha3 18 c1gvhA_ 19 d1tiaa_ 20 c3ngmB_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2l26A_ 100.0 24 PDB header:membrane protein Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922; PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains 2 d2aizp1 100.0 55 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 3 d2hqsc1 100.0 100 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 4 c2kgwA_ 100.0 25 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: solution structure of the carboxy-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis 5 c3khnB_ 100.0 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:motb protein, putative; PDBTitle: crystal structure of putative motb like protein dvu_22282 from desulfovibrio vulgaris. 6 c2k1sA_ 100.0 24 PDB header:lipoprotein Chain: A: PDB Molecule:inner membrane lipoprotein yiad; PDBTitle: solution nmr structure of the folded c-terminal fragment of yiad from2 escherichia coli. northeast structural genomics consortium target3 er553. 7 c3td4D_ 100.0 25 PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate 8 c3cyqM_ 100.0 24 PDB header:membrane protein Chain: M: PDB Molecule:chemotaxis protein motb; PDBTitle: the crystal structure of the complex of the c-terminal domain of2 helicobacter pylori motb (residues 125-256) with n-acetylmuramic acid 9 c1r1mA_ 100.0 34 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein class 4; PDBTitle: structure of the ompa-like domain of rmpm from neisseria2 meningitidis 10 d1r1ma_ 100.0 34 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 11 c2zvyB_ 100.0 23 PDB header:membrane protein Chain: B: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form ii) 12 c3ldtA_ 99.9 16 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein, ompa family protein; PDBTitle: crystal structure of an outer membrane protein(ompa)from2 legionella pneumophila 13 c3oonA_ 99.9 28 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein (tpn50); PDBTitle: the structure of an outer membrance protein from borrelia burgdorferi2 b31 14 c2zovA_ 99.9 26 PDB header:membrane protein Chain: A: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form i) 15 c2zf8A_ 99.8 27 PDB header:structural protein Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor; PDBTitle: crystal structure of moty 16 c2r6hC_ 48.4 38 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:ubiquinone oxidoreductase, na translocating, f PDBTitle: crystal structure of the domain comprising the nad binding and the fad2 binding regions of the nadh:ubiquinone oxidoreductase, na3 translocating, f subunit from porphyromonas gingivalis 17 d1gvha3 45.4 22 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Flavohemoglobin, C-terminal domain 18 c1gvhA_ 37.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:flavohemoprotein; PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket 19 d1tiaa_ 36.8 27 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 20 c3ngmB_ 34.8 36 PDB header:hydrolase Chain: B: PDB Molecule:extracellular lipase; PDBTitle: crystal structure of lipase from gibberella zeae 21 d1tiba_ not modelled 33.6 35 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 22 c3g7nA_ not modelled 32.0 16 PDB header:hydrolase Chain: A: PDB Molecule:lipase; PDBTitle: crystal structure of a triacylglycerol lipase from2 penicillium expansum at 1.3 23 c1tvcA_ not modelled 24.9 14 PDB header:oxidoreductase Chain: A: PDB Molecule:methane monooxygenase component c; PDBTitle: fad and nadh binding domain of methane monooxygenase2 reductase from methylococcus capsulatus (bath) 24 d1bwvs_ not modelled 23.8 19 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 25 c3o0dF_ not modelled 23.3 26 PDB header:hydrolase Chain: F: PDB Molecule:triacylglycerol lipase; PDBTitle: crystal structure of lip2 lipase from yarrowia lipolytica at 1.7 a2 resolution 26 d1uzhc1 not modelled 22.5 16 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 27 d1bxni_ not modelled 20.4 16 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 28 d1uwca_ not modelled 20.1 25 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 29 d1cqxa3 not modelled 19.8 13 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Flavohemoglobin, C-terminal domain 30 d1tvca2 not modelled 19.7 11 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like 31 c1cqxB_ not modelled 19.6 15 PDB header:lipid binding protein Chain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution 32 d1krha2 not modelled 17.5 15 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like 33 c3l7pA_ not modelled 17.1 17 PDB header:transcription Chain: A: PDB Molecule:putative nitrogen regulatory protein pii; PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans 34 d1rbli_ not modelled 16.5 17 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 35 d1xdpa4 not modelled 16.1 9 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 36 d3tgla_ not modelled 16.0 23 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 37 d1gk8i_ not modelled 15.6 16 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 38 d1svdm1 not modelled 14.2 12 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 39 d1ir1s_ not modelled 14.2 19 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 40 d1ej7s_ not modelled 13.8 16 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 41 d8ruci_ not modelled 13.8 19 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 42 d2o8ra4 not modelled 13.3 9 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 43 d4pgaa_ not modelled 13.2 18 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 44 d2v6ai1 not modelled 13.1 16 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 45 c2gpjA_ not modelled 12.7 12 PDB header:fad-binding protein Chain: A: PDB Molecule:siderophore-interacting protein; PDBTitle: crystal structure of a siderophore-interacting protein (sputcn32_0076)2 from shewanella putrefaciens cn-32 at 2.20 a resolution 46 d1uzdc1 not modelled 12.4 13 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 47 c2ckcA_ not modelled 12.2 17 PDB header:hydrolase Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 7; PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction 48 d2ckca1 not modelled 12.2 17 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 49 d1wdds_ not modelled 11.7 19 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 50 d2v0ea1 not modelled 11.1 20 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 51 c2rodB_ not modelled 10.2 17 PDB header:apoptosis Chain: B: PDB Molecule:noxa; PDBTitle: solution structure of mcl-1 complexed with noxaa 52 c2bgjB_ not modelled 9.2 17 PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp(h) reductase; PDBTitle: x-ray structure of the ferredoxin-nadp(h) reductase from2 rhodobacter capsulatus at 2.1 angstroms 53 d1o7ja_ not modelled 8.8 18 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 54 c3qbwA_ not modelled 8.1 16 PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate 55 c3cqyA_ not modelled 8.1 24 PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1 56 c1jrjA_ not modelled 8.0 17 PDB header:hormone/growth factor Chain: A: PDB Molecule:exendin-4; PDBTitle: solution structure of exendin-4 in 30-vol% trifluoroethanol 57 c2ckaA_ not modelled 7.9 17 PDB header:hydrolase Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 8; PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction 58 d2ckaa1 not modelled 7.9 17 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 59 d1agxa_ not modelled 7.7 23 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 60 c2o8rA_ not modelled 7.1 9 PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis 61 d1lgya_ not modelled 7.1 22 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 62 d1wsaa_ not modelled 6.8 13 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 63 d2ibge1 not modelled 6.7 13 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Hedgehog (development protein), N-terminal signaling domain 64 c2ogsA_ not modelled 6.7 24 PDB header:hydrolase Chain: A: PDB Molecule:thermostable carboxylesterase est50; PDBTitle: crystal structure of the geobacillus stearothermophilus2 carboxylesterase est55 at ph 6.2 65 d1uc8a1 not modelled 6.6 26 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Lysine biosynthesis enzyme LysX, N-terminal domain 66 d1tkja1 not modelled 6.5 15 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases 67 c3pe3D_ not modelled 5.8 22 PDB header:transferase Chain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n- PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate 68 c3pa8A_ not modelled 5.5 14 PDB header:toxin/peptide inhibitor Chain: A: PDB Molecule:toxin b; PDBTitle: structure of the c. difficile tcdb cysteine protease domain in complex2 with a peptide inhibitor 69 c3a9lB_ not modelled 5.5 22 PDB header:hydrolase Chain: B: PDB Molecule:poly-gamma-glutamate hydrolase; PDBTitle: structure of bacteriophage poly-gamma-glutamate hydrolase 70 c2oghA_ not modelled 5.4 18 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor eif-1; PDBTitle: solution structure of yeast eif1 71 c1nauA_ not modelled 5.3 36 PDB header:hormone/growth factor Chain: A: PDB Molecule:glucagon; PDBTitle: nmr solution structure of the glucagon antagonist [deshis1,2 desphe6, glu9]glucagon amide in the presence of3 perdeuterated dodecylphosphocholine micelles

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0