Email l.a.kelley@imperial.ac.uk Description P36677 Date Thu Jan 5 11:53:41 GMT 2012 Unique Job ID 114a3d16760ee23f

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2rfpA_ 75.8 24 PDB header:hydrolase Chain: A: PDB Molecule:putative ntp pyrophosphohydrolase; PDBTitle: crystal structure of putative ntp pyrophosphohydrolase2 (yp_001813558.1) from exiguobacterium sibiricum 255-15 at 1.74 a3 resolution 2 c1vgmB_ 46.4 16 PDB header:transferase Chain: B: PDB Molecule:378aa long hypothetical citrate synthase; PDBTitle: crystal structure of an isozyme of citrate synthase from sulfolbus2 tokodaii strain7 3 d1hw1a1 44.4 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:GntR-like transcriptional regulators 4 c2r26C_ 37.1 13 PDB header:transferase Chain: C: PDB Molecule:citrate synthase; PDBTitle: the structure of the ternary complex of carboxymethyl2 coenzyme a and oxalateacetate with citrate synthase from3 the thermophilic archaeonthermoplasma acidophilum 5 c3ic7A_ 36.8 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator of gntr family2 from bacteroides thetaiotaomicron 6 c2wv0H_ 34.4 21 PDB header:transcription Chain: H: PDB Molecule:hth-type transcriptional repressor yvoa; PDBTitle: crystal structure of the gntr-hutc family member yvoa from2 bacillus subtilis 7 d1o7xa_ 34.0 11 Fold:Citrate synthase Superfamily:Citrate synthase Family:Citrate synthase 8 c1e2xA_ 33.4 25 PDB header:transcriptional regulation Chain: A: PDB Molecule:fatty acid metabolism regulator protein; PDBTitle: fadr, fatty acid responsive transcription factor from e.2 coli 9 c3neuA_ 30.0 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin1836 protein; PDBTitle: the crystal structure of a functionally-unknown protein lin1836 from2 listeria innocua clip11262 10 d1v4ra1 28.7 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:GntR-like transcriptional regulators 11 c2vcbA_ 28.4 30 PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase; PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac 12 d1ioma_ 27.7 15 Fold:Citrate synthase Superfamily:Citrate synthase Family:Citrate synthase 13 c3by6C_ 26.4 12 PDB header:transcription regulator Chain: C: PDB Molecule:predicted transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni 14 d1k3pa_ 25.2 19 Fold:Citrate synthase Superfamily:Citrate synthase Family:Citrate synthase 15 c3eetA_ 24.6 9 PDB header:transcription regulator Chain: A: PDB Molecule:putative gntr-family transcriptional regulator; PDBTitle: crystal structure of putative gntr-family transcriptional2 regulator 16 c3bwgA_ 22.8 13 PDB header:transcription regulator Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk; PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168 17 c2p2wA_ 22.7 14 PDB header:transferase Chain: A: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from thermotoga maritima msb8 18 c3edpB_ 22.6 21 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lin2111 protein; PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262 19 c3tqnC_ 22.1 20 PDB header:transcription Chain: C: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: structure of the transcriptional regulator of the gntr family, from2 coxiella burnetii. 20 d1a59a_ 22.0 18 Fold:Citrate synthase Superfamily:Citrate synthase Family:Citrate synthase 21 d1r9la_ not modelled 21.3 18 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 22 c3tqgA_ not modelled 20.9 17 PDB header:transferase Chain: A: PDB Molecule:2-methylcitrate synthase; PDBTitle: structure of the 2-methylcitrate synthase (prpc) from coxiella2 burnetii 23 c3o8jH_ not modelled 20.6 19 PDB header:transferase Chain: H: PDB Molecule:2-methylcitrate synthase; PDBTitle: crystal structure of 2-methylcitrate synthase (prpc) from salmonella2 typhimurium 24 c2du9A_ not modelled 18.9 25 PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulators; PDBTitle: crystal structure of the transcriptional factor from c.glutamicum 25 c3fmsA_ not modelled 18.5 17 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator 26 c2h12C_ not modelled 17.6 19 PDB header:transferase Chain: C: PDB Molecule:citrate synthase; PDBTitle: structure of acetobacter aceti citrate synthase complexed2 with oxaloacetate and carboxymethyldethia coenzyme a (cmx) 27 d1csca_ not modelled 15.9 13 Fold:Citrate synthase Superfamily:Citrate synthase Family:Citrate synthase 28 d1hc1a2 not modelled 15.8 21 Fold:Di-copper centre-containing domain Superfamily:Di-copper centre-containing domain Family:Hemocyanin middle domain 29 d2fzta1 not modelled 15.7 41 Fold:Methionine synthase domain-like Superfamily:TM0693-like Family:TM0693-like 30 c3hhsA_ not modelled 15.6 35 PDB header:oxidoreductase Chain: A: PDB Molecule:phenoloxidase subunit 2; PDBTitle: crystal structure of manduca sexta prophenoloxidase 31 d3bwga1 not modelled 15.5 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:GntR-like transcriptional regulators 32 d1llaa2 not modelled 13.9 15 Fold:Di-copper centre-containing domain Superfamily:Di-copper centre-containing domain Family:Hemocyanin middle domain 33 d1bh9b_ not modelled 13.1 27 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 34 c2i9nA_ not modelled 12.8 70 PDB header:de novo protein Chain: A: PDB Molecule:mhb4a peptide; PDBTitle: design of bivalent miniprotein consisting of two2 independent elements, a b-hairpin peptide and a-helix3 peptide, tethered by four glycines 35 c2i9oA_ not modelled 12.5 70 PDB header:de novo protein Chain: A: PDB Molecule:mhb8a peptide; PDBTitle: design of bivalent miniprotein consisting of two2 independent elements, a b-hairpin peptide and a-helix3 peptide, tethered by eight glycines 36 d1e8ca2 not modelled 11.9 21 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 37 c3fkeB_ not modelled 11.5 40 PDB header:rna binding protein Chain: B: PDB Molecule:polymerase cofactor vp35; PDBTitle: structure of the ebola vp35 interferon inhibitory domain 38 c2ibpB_ not modelled 11.4 15 PDB header:transferase Chain: B: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from pyrobaculum aerophilum 39 d2hs5a1 not modelled 11.2 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:GntR-like transcriptional regulators 40 c1iq8B_ not modelled 11.1 26 PDB header:transferase Chain: B: PDB Molecule:archaeosine trna-guanine transglycosylase; PDBTitle: crystal structure of archaeosine trna-guanine2 transglycosylase from pyrococcus horikoshii 41 d1vi0a2 not modelled 10.4 18 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 42 c3ks8D_ not modelled 9.2 40 PDB header:viral protein/rna Chain: D: PDB Molecule:polymerase cofactor vp35; PDBTitle: crystal structure of reston ebolavirus vp35 rna binding2 domain in complex with 18bp dsrna 43 d2g7sa2 not modelled 8.4 20 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 44 c3f8mA_ not modelled 8.4 18 PDB header:transcription Chain: A: PDB Molecule:gntr-family protein transcriptional regulator; PDBTitle: crystal structure of phnf from mycobacterium smegmatis 45 d1rh7a_ not modelled 8.3 18 Fold:Resistin Superfamily:Resistin Family:Resistin 46 d1aj8a_ not modelled 8.0 18 Fold:Citrate synthase Superfamily:Citrate synthase Family:Citrate synthase 47 d1nb5i_ not modelled 7.9 40 Fold:Cystatin-like Superfamily:Cystatin/monellin Family:Cystatins 48 d1o98a1 not modelled 7.8 40 Fold:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Superfamily:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Family:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 49 c1nolA_ not modelled 7.5 18 PDB header:oxygen transport Chain: A: PDB Molecule:hemocyanin (subunit type ii); PDBTitle: oxygenated hemocyanin (subunit type ii) 50 d1atga_ not modelled 7.4 29 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 51 c3mvnA_ not modelled 7.3 19 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp 52 d2i10a2 not modelled 7.2 20 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 53 d1bvsa2 not modelled 7.1 21 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:DNA helicase RuvA subunit, middle domain 54 c1hcyE_ not modelled 7.0 25 PDB header:oxygen transport Chain: E: PDB Molecule:arthropodan hemocyanin; PDBTitle: crystal structure of hexameric haemocyanin from panulirus interruptus2 refined at 3.2 angstroms resolution 55 d1fi4a2 not modelled 6.7 10 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Mevalonate 5-diphosphate decarboxylase 56 c3ajvA_ not modelled 6.5 14 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: splicing endonuclease from aeropyrum pernix 57 d1z1za1 not modelled 6.5 22 Fold:Phage tail protein-like Superfamily:Phage tail protein-like Family:Lambda phage gpU-like 58 d1dpya_ not modelled 6.4 38 Fold:Phospholipase A2, PLA2 Superfamily:Phospholipase A2, PLA2 Family:Vertebrate phospholipase A2 59 d1g8fa3 not modelled 6.4 11 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ATP sulfurylase C-terminal domain 60 c3gwjE_ not modelled 6.3 33 PDB header:oxygen transport Chain: E: PDB Molecule:arylphorin; PDBTitle: crystal structure of antheraea pernyi arylphorin 61 d1yj5a2 not modelled 6.0 29 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nucleotide and nucleoside kinases 62 d1p3da2 not modelled 5.9 26 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 63 c1wsuA_ not modelled 5.9 15 PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna 64 d2zdra2 not modelled 5.8 21 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 65 c1yrlD_ not modelled 5.7 9 PDB header:oxidoreductase Chain: D: PDB Molecule:ketol-acid reductoisomerase; PDBTitle: escherichia coli ketol-acid reductoisomerase 66 c2xkyI_ not modelled 5.6 30 PDB header:metal transport Chain: I: PDB Molecule:inward rectifier potassium channel 2; PDBTitle: single particle analysis of kir2.1nc_4 in negative stain 67 d1k6ma1 not modelled 5.6 22 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain 68 d2o97b1 not modelled 5.5 27 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 69 c2ov2O_ not modelled 5.5 22 PDB header:protein binding/transferase Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4) 70 d1bifa1 not modelled 5.4 22 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain 71 c2odbB_ not modelled 5.3 33 PDB header:protein binding Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6; PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6)