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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2019 Nov 23

Fold library idPDB HeaderMoleculeTitle
c6i35A_ 2.00 oxidoreductase Chain: A: glycine dehydrogenase (decarboxylating), mitochondrial;
c6swy9_ 3.20 ligase Chain: 9: protein fyv10,protein fyv10;
c6p65A_ 3.94 viral protein/immune system Chain: A: hiv env 16055 nfl td 2cc+;
c6uh5X_ 3.50 transferase/structural protein/dna Chain: X: spp1;
c6rx3B_ 2.20 membrane protein Chain: B: syncytin-2;
c6i1hB_ 1.78 peptide binding protein Chain: B: penicillin-binding protein,penicillin-binding protein;
c6jsaA_ 1.30 heme-binding protein Chain: A: hypothetical membrane protein;
c6uxtC_ 1.80 structural genomics Chain: C: yfdx protein;
c6pc1B_ 2.76 hydrolase Chain: B: guanosine pentaphosphate phosphohydrolase;
c6ppjA_ 3.50 dna binding protein Chain: A: atp-dependent dna helicase (uvrd/rep);
c6i5oD_ 1.33 unknown function Chain: D: spbc2 prophage-derived uncharacterized protein yoms;
c6ppuB_ 3.50 dna binding protein/dna Chain: B: uvrd/rep helicase;
c6ia5C_ 1.88 viral protein Chain: C: phage-like element pbsx protein xepa;
c6ki2B_ 2.20 transport protein Chain: B: low affinity sulfate transporter;
c6istA_ 1.75 hydrolase Chain: A: lysin;
c6islB_ 1.77 lyase Chain: B: xime, snoal-like domain protein;
c6t5sA_ 1.50 hydrolase Chain: A: lysozyme c;
c6hzoD_ 2.44 peptide binding protein Chain: D: ftsi;
c6ppuA_ 3.50 dna binding protein/dna Chain: A: atp-dependent dna helicase (uvrd/rep);
c6jxgA_ 1.90 hydrolase Chain: A: beta-glucosidase;
c6js9B_ 2.00 heme-binding protein Chain: B: hypothetical membrane protein;
c6sa6A_ 1.60 de novo protein Chain: A: darpin-armadillo fusion a5;
c6pbzB_ 2.48 hydrolase Chain: B: guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase;
c6ppjB_ 3.50 dna binding protein Chain: B: uvrd/rep helicase;
c6mfzA_ 6.00 ligase Chain: A: linear gramicidin synthase subunit a;
c6sgfE_ 1.76 sugar binding protein Chain: E: beta-xylanase;
c6swy4_ 3.20 ligase Chain: 4: vacuolar import and degradation protein 24;
c6swy8_ 3.20 ligase Chain: 8: glucose-induced degradation protein 8;
c6klmA_ UNK plant protein Chain: A: roseltide rt7;
c6pfyM_ 2.90 photosynthesis Chain: M: photosystem i reaction center subunit xii;
c6rx4C_ 3.30 oxidoreductase Chain: C: cytochrome bd-i ubiquinol oxidase subunit x;
c6pfyX_ 2.90 photosynthesis Chain: X: photosystem i 4.8k protein;
c6sa8A_ 2.40 de novo protein Chain: A: ring-like darpin-armadillo fusion h83_d01;
c6jsbB_ 1.70 heme-binding protein Chain: B: hypothetical membrane protein;
c6absB_ 2.20 structural protein Chain: B: actin binding protein;
c6q55A_ 2.00 rna binding protein Chain: A: cleavage and polyadenylation specificity factor 3 (cpsf3);
c6swy1_ 3.20 ligase Chain: 1: vacuolar import and degradation protein 30,vacuolar import
c6swy5_ 3.20 ligase Chain: 5: vacuolar import and degradation protein 28;
c6pfyi_ 2.90 photosynthesis Chain: I: photosystem i reaction center subunit viii;
c6ki1A_ 2.81 transport protein Chain: A: low affinity sulfate transporter;
c6istC_ 1.75 hydrolase Chain: C: lysin;
c6j0qA_ 2.00 viral protein Chain: A: vp1 capsid protein;
c6pfyj_ 2.90 photosynthesis Chain: J: photosystem i reaction center subunit ix;
c6tzcC_ 2.41 structural protein/apoptosis Chain: C: beclin-1;
c6uh5M_ 3.50 transferase/structural protein/dna Chain: M: histone-lysine n-methyltransferase, h3 lysine-4 specific;
c6i33B_ 2.30 oxidoreductase Chain: B: glycine dehydrogenase (decarboxylating), mitochondrial;
c6pfyV_ 2.90 photosynthesis Chain: V: photosystem i reaction center subunit xii;
c6pfyW_ 2.90 photosynthesis Chain: W: photosystem i 4.8k protein;


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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