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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6i33B_

Fold library idPDB HeaderMoleculeTitle
c6i33B_2.30PDB header: oxidoreductaseChain: B: PDB Molecule: glycine dehydrogenase (decarboxylating), mitochondrial;


Added to library: Sat Nov 23 08:36:25 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLLERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLKRPLKMEDPVCENEILATL
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Known secondary structure (DSSP)
S

S

TS


T
S
S
GGGS
SS








GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence HAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLD
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Known secondary structure (DSSP) TTS





TT






TTT
S




SGGGB

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence MANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGVLTELKLPCEMDFSGKDVS
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Known secondary structure (DSSP)
S
BS


S
TTS
T


GGG


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVLFQYPDTEGKVEDFTELVERAHQSGSLACCATDLLALCILRPPGEFGVDIALGSSQRFGVPLGYGGPH
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Known secondary structure (DSSP) S
TTSB



TT

TTGGGTB

GGGGT
S
TTTT


GGG


 .........290.........300.........310.........320.........330.........340.........350
Sequence AAFFAVRESLVRMMPGRMVGVTRDATGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFAIYHG
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Known secondary structure (DSSP)

GGGGGG

S

BTT



GGGSGGGSS
S

S

 .........360.........370.........380.........390.........400.........410.........420
Sequence SHGLEHIARRVHNATLILSEGLKRAGHQLQHDLFFDTLKIQCGCSVKEVLGRAAQRQINFRLFEDGTLGI
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Known secondary structure (DSSP) TT
S
S
BSS
SS
TT

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLDETVNEKDLDDLLWIFGCESSAELVAESMGEECRGIPGSVFKRTSPFLTHQVFNSYHSETNIVRYMKK
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Known secondary structure (DSSP)

TT

TT
SS
TT
SS

TTTTSTTB

S



SGGGGS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence LENKDISLVHSMIPLGSCTMKLNSSSELAPITWKEFANIHPFVPLDQAQGYQQLFRELEKDLCELTGYDQ
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Known secondary structure (DSSP) TB

TTTS


BTTT





GGGG
T

TTS
GGG
T
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence VCFQPNSGAQGEYAGLATIRAYLTVCLIPKSAHGTNPASAHMAGMKIQPVEVDKYGNIAAIMITYPSTNG
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Known secondary structure (DSSP)



S

TTS
TTT



TTS


SS
TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence VFEENISDVCDLIHQHQVYLDGANMNAQVGICRPGDFGSDVSHLNLHKTFCIPHGGGGPGMGPIGVKKHL
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Known secondary structure (DSSP)


TT

GGGGGGTTTT

GGGGT



TTTTS



TTT






GGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence APFLPNHPVISLKDACPVGTVSAAPWGSSSILPISWAYIKMMGGKGLKQATETAILNANYMAKRLETHYR
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Known secondary structure (DSSP) GGGS


SSS










SSSTTSSGGGTTTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence ILFRGARGYVGHEFILDTRPFKKSANIEAVDVAKRLQDYGFHAPTMSWPVAGTLMVEPTESEDKAELDRF
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Known secondary structure (DSSP)



TTS

SS

T


TT



SSSSTT



TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence CDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSHWDRPYSREVAAFPLPFVKPENKFWPTIARI
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Known secondary structure (DSSP) TTSS
SSSS
S

T
S



SS


STTS
GGG



SSS
B
 .........920.....
Sequence DDIYGDQHLVCTCPP
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Known secondary structure (DSSP)
S


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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