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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6i1hB_

Fold library idPDB HeaderMoleculeTitle
c6i1hB_1.78PDB header: peptide binding proteinChain: B: PDB Molecule: penicillin-binding protein,penicillin-binding protein;


Added to library: Sat Nov 23 08:37:44 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDPLTINADLQRVAEESLNAAVKRVGGVWGSAAVLEIGTGRLLALAPGGTRSVSAIYEPGSVGKLVTLAA
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Known secondary structure (DSSP)


B


TT
STTT
BSSSS

B

GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AIDQKKVTPTSTFTVSSTRDMPNGERISDDSPHETQDMTVAGIIAHSYNTGTVQIGDTVSDSVRYEYMQK
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Known secondary structure (DSSP) TTS

TT

S
TTS

SS



T
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FGWGAKTGITLPSEESGILRPHTEWGDRDHYTTMFGQGVAVTTIQLAQMVAVFGQKGVLIPPRIIDGYYT
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Known secondary structure (DSSP) TTTTS



SSTT



B


GGG

GGGT
S
BB
GGGTTT


B
B
B


 .........220.........230.........240.........250.........260.........270.........280
Sequence PTVMGESRQVVSEDTAQTVLNIMQGATQPGGTAEGIGAVKGYNVAAKTGTAENVGSSGSLTDTAATFTAL
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Known secondary structure (DSSP) B






S
GGGGSTT
TTTTTT
BTTB


TTTSSS
 .........290.........300.........310.........320.........330......
Sequence IPAENPKIAVAVVIYKENGTVYGSTASAPVFVDIAQFAMREMKIPPSTVPLYKYPW
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Known secondary structure (DSSP) STTS

SSS


TT




S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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