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 Protein Homology/analogY Recognition Engine V 2.0


New fold library entries added 2017 Oct 28

Fold library idPDB HeaderMoleculeTitle
c5wdaL_ 5.00 protein transport Chain: L: general secretion pathway protein g;
c6b27F_ 1.73 protein binding Chain: F: sh3 and cysteine-rich domain-containing protein 2;
c5iuuA_ 2.09 oxidoreductase Chain: A: aldehyde dehydrogenase family protein;
c5whvF_ 2.30 toxin Chain: F: artb protein;
c5wjtX_ 3.80 protein fibril Chain: X:
c5gwtD_ 1.90 oxidoreductase Chain: D: 4-hydroxyisolecuine dehydrogenase;
c5nbpA_ 1.80 hydrolase Chain: A: glycosyl hydrolase family 16;
c5lvtC_ 2.10 dna binding protein Chain: C: dna-binding protein hu;
c5wlnF_ 3.57 membrane protein Chain: F: type ii secretion system protein d;
c6b0bE_ 3.28 hydrolase/rna Chain: E: apobec3h;
c5nupF_ 2.90 membrane protein Chain: F: abc transporter permease;
c5lxuA_ 2.14 dna binding protein Chain: A: transcription factor lux;
c5tmxA_ UNK transcription regulator Chain: A: protein sini;
c6bb9A_ 2.28 lyase Chain: A: 4-amino-4-deoxychorismate lyase;
c5odlA_ 1.56 dna binding protein Chain: A: single-stranded dna-binding protein;
c5owuB_ 2.00 transport protein Chain: B: nucleoporin nup1;
c5noiA_ 2.40 signaling protein Chain: A: roundabout homolog 2;
c5tn2B_ UNK transcription Chain: B: hth-type transcriptional regulator sinr;
c5xw6B_ 3.10 membrane protein Chain: B: p2x purinoceptor;
c5lxoG_ 2.18 structural protein Chain: G: transforming acidic coiled-coil-containing protein 3;
c5gt5A_ 1.45 lyase Chain: A: pectate lyase;
c6b8wB_ 1.90 transcription Chain: B: xre family transcriptional regulator;
c5lynA_ 2.00 chaperone Chain: A: small glutamine-rich tetratricopeptide repeat-containing
c5gleA_ 2.10 lyase Chain: A: ischorismate lyase;
c6b7nC_ 3.30 viral protein Chain: C: spike protein;
c5o1uB_ 1.90 hydrolase Chain: B: phosphodiesterase;
c5omcC_ 2.38 protein binding Chain: C: dna damage checkpoint protein lcd1;
c5gs5D_ 1.84 immune system Chain: D: stimulator of interferon genes protein;
c5ufyA_ 1.12 transferase Chain: A: acyltransferase;
c5gwsD_ 2.35 oxidoreductase Chain: D: 4-hydroxyisolecuine dehydrogenase;
c5x9vA_ 3.00 chaperone Chain: A: thermosome, alpha subunit;
c5x04B_ 2.43 hydrolase Chain: B: dodecanoyl-[acyl-carrier-protein] hydrolase, chloroplastic;
c5vklB_ 2.20 transcription Chain: B: dna-directed rna polymerase ii subunit rpb1;
c5o84A_ 1.88 transferase Chain: A: glutathione s-transferase u23;
c6anvA_ 2.27 immune system Chain: A: anti-crispr protein acrf1 fused with c-terminal mbp tag;
c5y1zB_ 2.68 transcription Chain: B: drebrin;
c5h3kA_ 1.70 unknown function Chain: A: slr0280 protein;
c5wixA_ 2.80 unknown function Chain: A: p-47 protein;
c5wpwA_ 1.85 allergen Chain: A: 11s globulin isoform 1;
c5ly0B_ 1.88 transcription Chain: B: lob family transfactor ramosa2.1;
c5lewA_ 2.80 transferase Chain: A: dna polymerase iii subunit alpha;
c5lwcA_ UNK antimicrobial protein Chain: A: bacteriocin bacsp222;
c6b29B_ 1.30 protein binding Chain: B: sh3 and cysteine-rich domain-containing protein 3;
c5y6oE_ 3.10 gene regulation Chain: E: death domain-associated protein 6,transcriptional regulator
c5lxjA_ UNK viral protein Chain: A: phosphoprotein;
c5wzfB_ 1.75 hydrolase Chain: B: 23s rrna-specific endonuclease vapc20;
c5wcvA_ UNK toxin Chain: A: shk homolog ask132958;
c6ekvA_ 2.10 lipid binding protein Chain: A: toxin complex component orf-x2;
c5tpkA_ 2.00 cell adhesion Chain: A: protocadherin-15;
c5vhvB_ 1.80 hydrolase/dna Chain: B: alkylpurine dna glycosylase alkc;
c5yhpB_ 2.39 hydrolase Chain: B: cold active proline iminopeptidase;
c5h2sA_ UNK antimicrobial protein Chain: A: piscidin-4;
c5xc5A_ 1.40 protein transport Chain: A: probable rab-related gtpase;
c5lw4A_ UNK oxidoreductase Chain: A: putative chitin binding protein;
c5ykbB_ 2.76 isomerase Chain: B: trehalose synthase;
c5uytB_ 1.75 antifreeze protein Chain: B: ice-binding protein;
c6b25A_ 2.39 protein binding Chain: A: sh3 and cysteine-rich domain-containing protein;
c5omdA_ 2.10 protein binding Chain: A: dna damage checkpoint protein lcd1;

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Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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