Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6b7nC_

Fold library idPDB HeaderMoleculeTitle
c6b7nC_3.30PDB header: viral proteinChain: C: PDB Molecule: spike protein;


Added to library: Sat Oct 28 08:28:43 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NFDVGVLPGYPTKNVNLFSPLTNSTLPINGLHRSYQPLMLNCLTKITNHTLSMYLLPSEIQTYSCGGAMV
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)




SSSS


S
TTSS



SS


S



S




SSSSS
S

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KYQTHDAVRIILDLTATDHISVEVVGQHGENYVFVCSEQFNYTTALHNSTFFSLNSELYCFTNNTYLGIL
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)



S



S



TTTSSS
S




SSS

SSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence PPDLTDFTVYRTGQFYANGYLLGTLPITVNYVRLYRGHLSANSAHFALANLTDTLITLTNTTISQITYCD
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
SS

TTSSSSS
SS


S

S





TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KSVVDSIACQRSSHEVEDGFYSDPKSAVRARQRTIVTLPKLPELEVVQLNISAHMDFGEARLDSVTINGN
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) S
TSSS

SS


S



TTB






S




SS




TTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence TSYCVTKPYFRLETNFMCTGCTMNLRTDTCSFDLSAVNNGMSFSQFCLSTESGACEMKIIVTYVWNYLLR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) S

SS




SSS

TTSSS
TTSSS

S
SSS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QRLYVTAVEGQTHTGTTSVHATDTSSVITDVCTDYTIYGVSGTGIIKPSDLLLHNGIAFTSPTGELYAFK
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) S


SSS
TTTT



SSTT
S



S
STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NITTGKTLQVLPCETPSQLIVINNTVVGAITSSNSTENNRFTTTIVTPTFFYSTNATTFNCTKPVLSYGP
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)
SSS


SS


SSS
SS
S
TTS





SSS
S






S

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence ISVCSDGAIVGISTLQNTRPSIVSLYDGEVEIPSAFSLSVQTEYLQVQAEQVIVDCPQYVCNGNSRCLQL
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
SS









S
SS

SS

B







STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LAQYTSACSNIEAALHSSAQLDSREIINMFKTSTQSLQLANITNFKGDYNFSSILTTRIGGRSAIEDLLF
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) S
S



TTSGGGG
SSS
TTTTS

SSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence NKVVTSGLGTVDQDYKSCSRDMAIADLVCSQYYNGIMVLPGVVDAEKMAMYTGSLTGAMVFGGLTAAAAI
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTTT
SSSTT



GGGS
TTTTTSSTTT


SS
GGG

SSTT



 .........710.........720.........730.........740.........750.........760.........770
Sequence PFATAVQARLNYVALQTNVLQENQKILAESFNQAVGNISLALSSVNDAIQQTSEALNTVAIAIKKIQTVV
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)
SSSSS

SSTS



TT
S
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence NQQGEALSHLTAQLSNNFQAISTSIQDIYNRLEEVEANQQVDRLITGRLAALNAYVTQLLNQMSQIRQSR
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TT


SSS
S
STTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence LLAQQKINECVKSQSSRYGFCGNGTHIFSLTQTAPNGIFFMHAVLVPNKFTRVNASAGICVDNTRGYSLQ
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTT



TTTTSSS
TT

B

BSTTT

 .........920.........930.........940.........950.........960......
Sequence PQLILYQFNNSWRVTPRNMYEPRLPRQADFIQLTDCSVTFYNTTAANLPNIIPDII
Predicted secondary structure


























SS confidence























































Known secondary structure (DSSP) SSTTSSS






GGG
B





SS


B
SSSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D