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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5uytB_

Fold library idPDB HeaderMoleculeTitle
c5uytB_1.75PDB header: antifreeze proteinChain: B: PDB Molecule: ice-binding protein;


Added to library: Sat Oct 28 08:57:22 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QAPTLGAAANFALFTTAGAVTNTGLSHITGDVGTNNAASTNFGNVDGVMQDSNGATSAAAADLLIAYNLL
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Known secondary structure (DSSP)




GGGGGSSS
S

SSSS

BS



BS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NAAIPTATLAPLLGNGTTLTAGNYFIGQGASLSGTLTLDGGGNSNSVFIFKIQGALSSAANTQVLLTNGA
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S

STT
SSS
S
TT
TT

SS

TT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LACNVFWKVEGLVDLATNTVMKGNVVANNAAIVLQSGVSLEGRALSTTGAITVTGVTVRKPILCGSAVLT
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Known secondary structure (DSSP)
GGGSS

TT
SSS

TT
SSS
S




TT




 .........220.........230.........240.........250.........260.........270.........280
Sequence GPVAPNLGTVVCYTIFSGNGALTNAGITYVTGDVGTNVGLTTGFQADNVNGTIHSNPDTSTAQAALDLNN
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Known secondary structure (DSSP)
S




GGGGGSSS
SS
SSSS
S

GGGS
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence AYTYLNTLPTDIELLYPAAFGQNLVLTPHTYLLNAATVLNGKVTLDAQGNENAVFVIKINGALSTTVNAS
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Known secondary structure (DSSP) S

S
S
GGG
BTT
SS
S
BS
TT
TT

S

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VELINGAIAKNVFWKVDGAVDLNDYTKFKGSVIGNNGAVIINTGVEIEGRVLSTSGGISTFGINAQMTPG
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Known secondary structure (DSSP) TT

GGGB

TT
SS

TT
SSS
S


S
 ....
Sequence CELL
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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