Email l.a.kelley@imperial.ac.uk Description P75791 Date Thu Jan 5 12:14:10 GMT 2012 Unique Job ID fac86ab453590ec2

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2csga1 100.0 85 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:YbiU-like 2 c2dbiA_ 100.0 98 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ybiu; PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli 3 c2opwA_ 99.3 18 PDB header:oxidoreductase Chain: A: PDB Molecule:phyhd1 protein; PDBTitle: crystal structure of human phytanoyl-coa dioxygenase phyhd1 (apo) 4 d2fcta1 99.2 15 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:PhyH-like 5 d2a1xa1 99.2 16 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:PhyH-like 6 c3gjbA_ 99.1 17 PDB header:biosynthetic protein Chain: A: PDB Molecule:cytc3; PDBTitle: cytc3 with fe(ii) and alpha-ketoglutarate 7 c3emrA_ 99.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:ectd; PDBTitle: crystal structure analysis of the ectoine hydroxylase ectd from2 salibacillus salexigens 8 c2rdsA_ 98.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxypentalenic acid 11-beta hydroxylase; fe(ii)/alpha- PDBTitle: crystal structure of ptlh with fe/oxalylglycine and ent-1-2 deoxypentalenic acid bound 9 c3nnlB_ 98.0 18 PDB header:biosynthetic protein Chain: B: PDB Molecule:cura; PDBTitle: halogenase domain from cura module (crystal form iii) 10 d1dcsa_ 96.7 16 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 11 c3on7C_ 95.9 18 PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase, iron/ascorbate family; PDBTitle: crystal structure of a putative oxygenase (so_2589) from shewanella2 oneidensis at 2.20 a resolution 12 c3ooxA_ 95.0 12 PDB header:oxidoreductase Chain: A: PDB Molecule:putative 2og-fe(ii) oxygenase family protein; PDBTitle: crystal structure of a putative 2og-fe(ii) oxygenase family protein2 (cc_0200) from caulobacter crescentus at 1.44 a resolution 13 d1w9ya1 90.1 13 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 14 c3dkqB_ 89.8 16 PDB header:oxidoreductase Chain: B: PDB Molecule:pkhd-type hydroxylase sbal_3634; PDBTitle: crystal structure of putative oxygenase (yp_001051978.1) from2 shewanella baltica os155 at 2.26 a resolution 15 c3e77A_ 89.4 11 PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp 16 c2g19A_ 87.4 10 PDB header:oxidoreductase Chain: A: PDB Molecule:egl nine homolog 1; PDBTitle: cellular oxygen sensing: crystal structure of hypoxia-2 inducible factor prolyl hydroxylase (phd2) 17 c3ms5A_ 78.8 15 PDB header:oxidoreductase Chain: A: PDB Molecule:gamma-butyrobetaine dioxygenase; PDBTitle: crystal structure of human gamma-butyrobetaine,2-oxoglutarate2 dioxygenase 1 (bbox1) 18 d1gp6a_ 77.5 11 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 19 c3m5uA_ 76.7 12 PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni 20 d2c0ra1 76.1 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 21 c3qm2A_ not modelled 68.7 15 PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium 22 d1odma_ not modelled 66.3 7 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Penicillin synthase-like 23 d1w23a_ not modelled 65.0 14 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 24 d2z1ca1 not modelled 57.1 25 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 25 c2jijA_ not modelled 51.4 22 PDB header:hydrolase Chain: A: PDB Molecule:prolyl-4 hydroxylase; PDBTitle: crystal structure of the apo form of chlamydomonas2 reinhardtii prolyl-4 hydroxylase type i 26 d1v70a_ not modelled 49.7 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 27 c3ouiA_ not modelled 49.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:egl nine homolog 1; PDBTitle: phd2-r717 with 40787422 28 c3pvjB_ not modelled 48.5 3 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of the fe(ii)/alpha-ketoglutarate dependent taurine2 dioxygenase from pseudomonas putida kt2440 29 d1y9qa2 not modelled 44.9 24 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Probable transcriptional regulator VC1968, C-terminal domain 30 d2toda1 not modelled 44.8 14 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 31 c3gt2A_ not modelled 44.1 18 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c 32 d1bjna_ not modelled 44.0 14 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 33 c3pbiA_ not modelled 43.5 13 PDB header:hydrolase Chain: A: PDB Molecule:invasion protein; PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution 34 d2ot2a1 not modelled 43.3 26 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 35 c3itqB_ not modelled 43.2 23 PDB header:oxidoreductase Chain: B: PDB Molecule:prolyl 4-hydroxylase, alpha subunit domain protein; PDBTitle: crystal structure of a prolyl 4-hydroxylase from bacillus anthracis 36 d1otja_ not modelled 42.8 6 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TauD/TfdA-like 37 c2a1dH_ not modelled 42.5 11 PDB header:hydrolase/hydrolase inhibitor Chain: H: PDB Molecule:staphylocoagulase; PDBTitle: staphylocoagulase bound to bovine thrombin 38 c3r1jB_ not modelled 42.1 6 PDB header:oxidoreductase Chain: B: PDB Molecule:alpha-ketoglutarate-dependent taurine dioxygenase; PDBTitle: crystal structure of alpha-ketoglutarate-dependent taurine dioxygenase2 from mycobacterium avium, native form 39 d2bnma2 not modelled 41.8 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like 40 c2doqD_ not modelled 40.5 43 PDB header:cell cycle Chain: D: PDB Molecule:sfi1p; PDBTitle: crystal structure of sfi1p/cdc31p complex 41 d1bw0a_ not modelled 40.3 13 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 42 d1q3qa2 not modelled 40.2 13 Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:Group II chaperonin (CCT, TRIC), apical domain 43 d1oiha_ not modelled 39.6 10 Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:TauD/TfdA-like 44 c2hbkA_ not modelled 37.1 12 PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:exosome complex exonuclease rrp6; PDBTitle: structure of the yeast nuclear exosome component, rrp6p,2 reveals an interplay between the active site and the hrdc3 domain; protein in complex with mn 45 d7odca1 not modelled 36.9 27 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 46 c3sahA_ not modelled 35.5 18 PDB header:hydrolase Chain: A: PDB Molecule:exosome component 10; PDBTitle: crystal structure of the human rrp6 catalytic domain with y436a2 mutation in the catalytic site 47 c3cewA_ not modelled 35.0 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized cupin protein; PDBTitle: crystal structure of a cupin protein (bf4112) from bacteroides2 fragilis. northeast structural genomics consortium target bfr205 48 c3d3rA_ not modelled 35.0 21 PDB header:chaperone Chain: A: PDB Molecule:hydrogenase assembly chaperone hypc/hupf; PDBTitle: crystal structure of the hydrogenase assembly chaperone hypc/hupf2 family protein from shewanella oneidensis mr-1 49 d1g7oa1 not modelled 34.8 12 Fold:GST C-terminal domain-like Superfamily:GST C-terminal domain-like Family:Glutathione S-transferase (GST), C-terminal domain 50 c3h7yA_ not modelled 34.6 9 PDB header:biosynthetic protein Chain: A: PDB Molecule:bacilysin biosynthesis protein bacb; PDBTitle: crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form 51 d3d3ra1 not modelled 34.2 21 Fold:OB-fold Superfamily:HupF/HypC-like Family:HupF/HypC-like 52 c2on3A_ not modelled 33.7 14 PDB header:lyase Chain: A: PDB Molecule:ornithine decarboxylase; PDBTitle: a structural insight into the inhibition of human and2 leishmania donovani ornithine decarboxylases by 3-aminooxy-3 1-aminopropane 53 c3cp8C_ not modelled 33.3 15 PDB header:oxidoreductase Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: crystal structure of gida from chlorobium tepidum 54 d1vp4a_ not modelled 33.3 14 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 55 d2hbka2 not modelled 31.6 12 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease 56 c3kt4A_ not modelled 30.9 5 PDB header:oxidoreductase Chain: A: PDB Molecule:pkhd-type hydroxylase tpa1; PDBTitle: crystal structure of tpa1 from saccharomyces cerevisiae, a2 component of the messenger ribonucleoprotein complex 57 d1f3ta1 not modelled 30.7 14 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 58 c2xivA_ not modelled 30.4 13 PDB header:structural protein Chain: A: PDB Molecule:hypothetical invasion protein; PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis 59 d2evra2 not modelled 30.1 43 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60 60 c3fcrA_ not modelled 27.8 16 PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aminotransferase (yp_614685.1) from2 silicibacter sp. tm1040 at 1.80 a resolution 61 d1njjb1 not modelled 27.7 14 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 62 d1sfna_ not modelled 27.6 16 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 63 d1pmma_ not modelled 27.2 19 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Pyridoxal-dependent decarboxylase 64 c3lnoA_ not modelled 26.8 9 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of domain of unknown function duf59 from2 bacillus anthracis 65 c3bq9A_ not modelled 26.6 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted rossmann fold nucleotide-binding domain- PDBTitle: crystal structure of predicted nucleotide-binding protein from2 idiomarina baltica os145 66 c3dxvA_ not modelled 26.4 16 PDB header:isomerase Chain: A: PDB Molecule:alpha-amino-epsilon-caprolactam racemase; PDBTitle: the crystal structure of alpha-amino-epsilon-caprolactam racemase from2 achromobacter obae 67 c3thtB_ not modelled 25.9 25 PDB header:oxidoreductase Chain: B: PDB Molecule:alkylated dna repair protein alkb homolog 8; PDBTitle: crystal structure and rna binding properties of the rrm/alkb domains2 in human abh8, an enzyme catalyzing trna hypermodification, northeast3 structural genomics consortium target hr5601b 68 d1uwda_ not modelled 25.6 14 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 69 c2fg0B_ not modelled 25.4 43 PDB header:hydrolase Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution 70 c1knwA_ not modelled 25.3 16 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase 71 c3ibmB_ not modelled 24.4 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila 72 c2wl2B_ not modelled 24.3 15 PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit a; PDBTitle: crystal structure of n-terminal domain of gyra with the2 antibiotic simocyclinone d8 73 c2ozjB_ not modelled 22.8 22 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel; PDBTitle: crystal structure of a cupin superfamily protein (dsy2733) from2 desulfitobacterium hafniense dcb-2 at 1.60 a resolution 74 c2xcqA_ not modelled 22.8 18 PDB header:isomerase Chain: A: PDB Molecule:dna gyrase subunit b, dna gyrase subunit a; PDBTitle: the 2.98a crystal structure of the catalytic core (b'a'2 region) of staphylococcus aureus dna gyrase 75 c3s6eB_ not modelled 22.5 23 PDB header:rna binding protein Chain: B: PDB Molecule:rna-binding protein 39; PDBTitle: crystal structure of a rna binding motif protein 39 (rbm39) from mus2 musculus at 0.95 a resolution 76 c3t18D_ not modelled 22.2 14 PDB header:transferase Chain: D: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase from anaerococcus prevotii dsm2 20548. 77 c3h41A_ not modelled 22.0 30 PDB header:hydrolase Chain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution 78 c3h8uA_ not modelled 21.5 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein with double-stranded PDBTitle: crystal structure of uncharacterized conserved protein with double-2 stranded beta-helix domain (yp_001338853.1) from klebsiella3 pneumoniae subsp. pneumoniae mgh 78578 at 1.80 a resolution 79 c3jzvA_ not modelled 21.5 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rru_a2000; PDBTitle: crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain. 80 d1d7ka1 not modelled 20.9 19 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 81 d2mev1_ not modelled 20.6 19 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 82 d1t0fa2 not modelled 20.6 20 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:TnsA endonuclease, N-terminal domain 83 c2pfyA_ not modelled 20.5 17 PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp7, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid 84 d1apaa_ not modelled 20.3 11 Fold:Ribosome inactivating proteins (RIP) Superfamily:Ribosome inactivating proteins (RIP) Family:Plant cytotoxins 85 c3dnfB_ not modelled 20.3 23 PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PDBTitle: structure of (e)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase,2 the terminal enzyme of the non-mevalonate pathway 86 c2xcsD_ not modelled 20.1 17 PDB header:isomerase Chain: D: PDB Molecule:dna gyrase subunit b, dna gyrase subunit a; PDBTitle: the 2.1a crystal structure of s. aureus gyrase complex with gsk2994232 and dna 87 c2kp6A_ not modelled 19.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein cv0237 from2 chromobacterium violaceum. northeast structural genomics3 consortium (nesg) target cvt1 88 c3dydB_ not modelled 19.8 10 PDB header:transferase Chain: B: PDB Molecule:tyrosine aminotransferase; PDBTitle: human tyrosine aminotransferase 89 c2pb2B_ not modelled 19.7 13 PDB header:transferase Chain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding 90 c2vpvA_ not modelled 19.7 3 PDB header:cell cycle Chain: A: PDB Molecule:protein mif2; PDBTitle: dimerization domain of mif2p 91 d1knwa1 not modelled 19.4 22 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like 92 c3fjsC_ not modelled 18.8 13 PDB header:biosynthetic protein Chain: C: PDB Molecule:uncharacterized protein with rmlc-like cupin fold; PDBTitle: crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution 93 d1y0ka1 not modelled 18.6 41 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:PA4535-like 94 c3uyjA_ not modelled 18.4 14 PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 8; PDBTitle: crystal structure of jmjd5 catalytic core domain in complex with2 nickle and alpha-kg 95 c1e40A_ not modelled 18.0 13 PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase; PDBTitle: tris/maltotriose complex of chimaeric amylase from b.2 amyloliquefaciens and b. licheniformis at 2.2a 96 d1zvpa1 not modelled 17.9 60 Fold:Ferredoxin-like Superfamily:ACT-like Family:VC0802-like 97 d1bvua2 not modelled 17.4 18 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 98 d1gtma2 not modelled 16.7 18 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases 99 c2p3eA_ not modelled 16.4 11 PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus