PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dkqB_

Fold library id	PDB Header	Molecule	Title
c3dkqB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: pkhd-type hydroxylase sbal_3634;	PDBTitle: crystal structure of putative oxygenase (yp_001051978.1)2 from shewanella baltica os155 at 2.26 a resolution

Links to external resources
Added to library: Tue Mar 16 12:17:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N L Y F Q G X L I E I P N V F S K Q E V S H L R E Q L D A R R W I D G R N Q Q L D K D D P V A V A L G Q Q I X D R L L A H P Q F V S A A L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T S
B
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L Q F Y P P L F N R Y Q G G E T F G Y H I D R T D L S A T L F L S E P E N Y Q G G E L V I Q D T Y G Q Q S I K L S A G S L V L Y P S S S L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
G G G
S S
T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence Q V T P V L S G E R T A A F X W L Q S X V R D E G Q R R L L F Q L D Q S I Q S L T A Q T A A E Q E L F N L S G V Y H N L L R R W S E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	L	Y	F	Q	G	X	L	I	E	I	P	N	V	F	S	K	Q	E	V	S	H	L	R	E	Q	L	D	A	R	R	W	I	D	G	R	N	Q	Q	L	D	K	D	D	P	V	A	V	A	L	G	Q	Q	I	X	D	R	L	L	A	H	P	Q	F	V	S	A	A	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T							S	S														T	S			B									T	T																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Q	F	Y	P	P	L	F	N	R	Y	Q	G	G	E	T	F	G	Y	H	I	D	R	T	D	L	S	A	T	L	F	L	S	E	P	E	N	Y	Q	G	G	E	L	V	I	Q	D	T	Y	G	Q	Q	S	I	K	L	S	A	G	S	L	V	L	Y	P	S	S	S	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T																			S		G	G	G											S	S									T	T							T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	Q	V	T	P	V	L	S	G	E	R	T	A	A	F	X	W	L	Q	S	X	V	R	D	E	G	Q	R	R	L	L	F	Q	L	D	Q	S	I	Q	S	L	T	A	Q	T	A	A	E	Q	E	L	F	N	L	S	G	V	Y	H	N	L	L	R	R	W	S	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S																						T	T