Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	Q	V	F	I	M	R	H	G	D	A	A	L	D	A	A	S	D	S	V	R	P	L	T	T	N	G	C	D	E	S	R	L	M	A	N	W	L	K	G	Q	K	V	E	I	E	R	V	L	V	S	P	F	L	R	A	E	Q	T	L
Secondary structure
SS confidence
Disorder		?												?	?	?	?	?	?	?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		E	E	V	G	D	C	L	N	L	P	S	S	A	E	V	L	P	E	L	T	P	C	G	D	V	G	L	V	S	A	Y	L	Q	A	L	T	N	E	G	V	A	S	V	L	V	I	S	H	L	P	L	V	G	Y	L	V	A	E	L	C
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Sequence		P	G	E	T	P	P	M	F	T	T	S	A	I	A	S	V	T	L	D	E	S	G	N	G	T	F	N	W	Q	M	S	P	C	N	L	K	M	A	K	A	I
Secondary structure
SS confidence
Disorder				?	?	?	?																													?	?	?	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1ujc chain A Region: 1 - 156 Aligned: 156 Modelled: 156 Confidence: 100.0% Identity: 100% PDB header:hydrolase Chain: A: PDB Molecule:phosphohistidine phosphatase sixa; PDBTitle: structure of the protein histidine phosphatase sixa2 complexed with tungstate Phyre2 PDB 3f2i chain D Region: 1 - 157 Aligned: 156 Modelled: 155 Confidence: 100.0% Identity: 24% PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr0221 protein; PDBTitle: crystal structure of the alr0221 protein from nostoc, northeast2 structural genomics consortium target nsr422. Phyre2 PDB 2rfl chain B Region: 1 - 152 Aligned: 145 Modelled: 152 Confidence: 100.0% Identity: 21% PDB header:hydrolase, isomerase Chain: B: PDB Molecule:putative phosphohistidine phosphatase sixa; PDBTitle: crystal structure of the putative phosphohistidine phosphatase sixa2 from agrobacterium tumefaciens Phyre2 PDB 3mxo chain B Region: 1 - 159 Aligned: 158 Modelled: 159 Confidence: 100.0% Identity: 16% PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase pgam5, mitochondrial; PDBTitle: crystal structure oh human phosphoglycerate mutase family member 52 (pgam5) Phyre2 PDB 1e58 chain A Region: 1 - 160 Aligned: 160 Modelled: 160 Confidence: 100.0% Identity: 19% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 1yjx chain D Region: 2 - 158 Aligned: 157 Modelled: 157 Confidence: 100.0% Identity: 23% PDB header:isomerase, hydrolase Chain: D: PDB Molecule:phosphoglycerate mutase 1; PDBTitle: crystal structure of human b type phosphoglycerate mutase Phyre2 PDB 1rii chain A Region: 1 - 160 Aligned: 160 Modelled: 160 Confidence: 100.0% Identity: 20% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 1qhf chain A Region: 2 - 160 Aligned: 159 Modelled: 159 Confidence: 100.0% Identity: 21% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 2a6p chain A Region: 1 - 154 Aligned: 153 Modelled: 154 Confidence: 100.0% Identity: 16% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible phosphoglycerate mutase gpm2; PDBTitle: structure solution to 2.2 angstrom and functional characterisation of2 the open reading frame rv3214 from mycobacterium tuberculosis Phyre2 PDB 3ezn chain B Region: 1 - 145 Aligned: 145 Modelled: 145 Confidence: 100.0% Identity: 24% PDB header:isomerase Chain: B: PDB Molecule:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglyceromutase from burkholderia2 pseudomallei 1710b Phyre2 PDB 2hhj chain A domain 1 Region: 1 - 159 Aligned: 158 Modelled: 159 Confidence: 100.0% Identity: 21% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 3d8h chain B Region: 1 - 151 Aligned: 151 Modelled: 151 Confidence: 100.0% Identity: 21% PDB header:isomerase Chain: B: PDB Molecule:glycolytic phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglycerate mutase from cryptosporidium2 parvum, cgd7_4270 Phyre2 PDB 3r7a chain A Region: 1 - 159 Aligned: 156 Modelled: 159 Confidence: 100.0% Identity: 19% PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate mutase, putative; PDBTitle: crystal structure of phosphoglycerate mutase from bacillus anthracis2 str. sterne Phyre2 PDB 1xq9 chain A Region: 2 - 150 Aligned: 149 Modelled: 149 Confidence: 100.0% Identity: 18% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 3pgm chain A Region: 2 - 152 Aligned: 151 Modelled: 151 Confidence: 100.0% Identity: 19% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 3d4i chain D Region: 2 - 147 Aligned: 146 Modelled: 146 Confidence: 100.0% Identity: 24% PDB header:hydrolase Chain: D: PDB Molecule:sts-2 protein; PDBTitle: crystal structure of the 2h-phosphatase domain of sts-2 Phyre2 PDB 1fzt chain A Region: 2 - 151 Aligned: 150 Modelled: 150 Confidence: 100.0% Identity: 21% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: Cofactor-dependent phosphoglycerate mutase Phyre2 PDB 3c7t chain B Region: 2 - 146 Aligned: 142 Modelled: 145 Confidence: 100.0% Identity: 27% PDB header:hydrolase Chain: B: PDB Molecule:ecdysteroid-phosphate phosphatase; PDBTitle: crystal structure of the ecdysone phosphate phosphatase, eppase, from2 bombix mori in complex with tungstate Phyre2 PDB 2ikq chain A Region: 2 - 152 Aligned: 151 Modelled: 151 Confidence: 100.0% Identity: 25% PDB header:signaling protein, immune system Chain: A: PDB Molecule:suppressor of t-cell receptor signaling 1; PDBTitle: crystal structure of mouse sts-1 pgm domain in complex with phosphate Phyre2 PDB 1tip chain A Region: 1 - 151 Aligned: 149 Modelled: 151 Confidence: 100.0% Identity: 20% Fold: Phosphoglycerate mutase-like Superfamily: Phosphoglycerate mutase-like Family: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain Phyre2 1 c1ujcA_ 2 c3f2iD_ 3 c2rflB_ 4 c3mxoB_ 5 d1e58a_ 6 c1yjxD_ 7 d1riia_ 8 d1qhfa_ 9 c2a6pA_ 10 c3eznB_ 11 d2hhja1 12 c3d8hB_ 13 c3r7aA_ 14 d1xq9a_ 15 d3pgma_ 16 c3d4iD_ 17 d1fzta_ 18 c3c7tB_ 19 c2ikqA_ 20 d1tipa_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1ujcA_ 100.0 100 PDB header:hydrolase Chain: A: PDB Molecule:phosphohistidine phosphatase sixa; PDBTitle: structure of the protein histidine phosphatase sixa2 complexed with tungstate 2 c3f2iD_ 100.0 24 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:alr0221 protein; PDBTitle: crystal structure of the alr0221 protein from nostoc, northeast2 structural genomics consortium target nsr422. 3 c2rflB_ 100.0 21 PDB header:hydrolase, isomerase Chain: B: PDB Molecule:putative phosphohistidine phosphatase sixa; PDBTitle: crystal structure of the putative phosphohistidine phosphatase sixa2 from agrobacterium tumefaciens 4 c3mxoB_ 100.0 16 PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase pgam5, mitochondrial; PDBTitle: crystal structure oh human phosphoglycerate mutase family member 52 (pgam5) 5 d1e58a_ 100.0 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 6 c1yjxD_ 100.0 23 PDB header:isomerase, hydrolase Chain: D: PDB Molecule:phosphoglycerate mutase 1; PDBTitle: crystal structure of human b type phosphoglycerate mutase 7 d1riia_ 100.0 20 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 8 d1qhfa_ 100.0 21 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 9 c2a6pA_ 100.0 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible phosphoglycerate mutase gpm2; PDBTitle: structure solution to 2.2 angstrom and functional characterisation of2 the open reading frame rv3214 from mycobacterium tuberculosis 10 c3eznB_ 100.0 24 PDB header:isomerase Chain: B: PDB Molecule:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglyceromutase from burkholderia2 pseudomallei 1710b 11 d2hhja1 100.0 21 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 12 c3d8hB_ 100.0 21 PDB header:isomerase Chain: B: PDB Molecule:glycolytic phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglycerate mutase from cryptosporidium2 parvum, cgd7_4270 13 c3r7aA_ 100.0 19 PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate mutase, putative; PDBTitle: crystal structure of phosphoglycerate mutase from bacillus anthracis2 str. sterne 14 d1xq9a_ 100.0 18 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 15 d3pgma_ 100.0 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 16 c3d4iD_ 100.0 24 PDB header:hydrolase Chain: D: PDB Molecule:sts-2 protein; PDBTitle: crystal structure of the 2h-phosphatase domain of sts-2 17 d1fzta_ 100.0 21 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 18 c3c7tB_ 100.0 27 PDB header:hydrolase Chain: B: PDB Molecule:ecdysteroid-phosphate phosphatase; PDBTitle: crystal structure of the ecdysone phosphate phosphatase, eppase, from2 bombix mori in complex with tungstate 19 c2ikqA_ 100.0 25 PDB header:signaling protein, immune system Chain: A: PDB Molecule:suppressor of t-cell receptor signaling 1; PDBTitle: crystal structure of mouse sts-1 pgm domain in complex with phosphate 20 d1tipa_ 100.0 20 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 21 c3hjgB_ not modelled 100.0 14 PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-ribazole-5'-phosphate phosphatase PDBTitle: crystal structure of putative alpha-ribazole-5'-phosphate2 phosphatase cobc from vibrio parahaemolyticus 22 c3dcyA_ not modelled 100.0 21 PDB header:apoptosis regulator Chain: A: PDB Molecule:regulator protein; PDBTitle: crystal structure a tp53-induced glycolysis and apoptosis2 regulator protein from homo sapiens. 23 c3ll4B_ not modelled 99.9 21 PDB header:hydrolase Chain: B: PDB Molecule:uncharacterized protein ykr043c; PDBTitle: structure of the h13a mutant of ykr043c in complex with fructose-1,6-2 bisphosphate 24 c3fjyB_ not modelled 99.9 22 PDB header:hydrolase Chain: B: PDB Molecule:probable mutt1 protein; PDBTitle: crystal structure of a probable mutt1 protein from bifidobacterium2 adolescentis 25 d1v37a_ not modelled 99.9 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 26 c3f3kA_ not modelled 99.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ykr043c; PDBTitle: the structure of uncharacterized protein ykr043c from saccharomyces2 cerevisiae. 27 c3e9eB_ not modelled 99.9 19 PDB header:hydrolase Chain: B: PDB Molecule:zgc:56074; PDBTitle: structure of full-length h11a mutant form of tigar from danio rerio 28 c2qniA_ not modelled 99.9 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu0299; PDBTitle: crystal structure of uncharacterized protein atu0299 29 d1h2ea_ not modelled 99.9 18 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Cofactor-dependent phosphoglycerate mutase 30 d1bifa2 not modelled 99.9 20 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 31 c2i1vB_ not modelled 99.9 20 PDB header:transferase, hydrolase Chain: B: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of pfkfb3 in complex with adp and2 fructose-2,6-bisphosphate 32 d1k6ma2 not modelled 99.9 20 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain 33 c1k6mA_ not modelled 99.9 22 PDB header:transferase, hydrolase Chain: A: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of human liver 6-phosphofructo-2-2 kinase/fructose-2,6-bisphosphatase 34 c1bifA_ not modelled 99.9 23 PDB header:bifunctional enzyme Chain: A: PDB Molecule:6-phosphofructo-2-kinase/ fructose-2,6-bisphosphatase; PDBTitle: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase bifunctional2 enzyme complexed with atp-g-s and phosphate 35 c3eozB_ not modelled 99.9 22 PDB header:isomerase Chain: B: PDB Molecule:putative phosphoglycerate mutase; PDBTitle: crystal structure of phosphoglycerate mutase from plasmodium2 falciparum, pfd0660w 36 c2glcA_ not modelled 98.0 26 PDB header:hydrolase Chain: A: PDB Molecule:histidine acid phosphatase; PDBTitle: structure of francisella tularensis histidine acid2 phosphatase bound to orthovanadate 37 d1nd6a_ not modelled 97.9 17 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 38 d1rpaa_ not modelled 97.9 18 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 39 d1ihpa_ not modelled 97.8 19 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 40 c2wniC_ not modelled 97.7 29 PDB header:hydrolase Chain: C: PDB Molecule:3-phytase; PDBTitle: crystal structure analysis of klebsiella sp asr1 phytase 41 d1nt4a_ not modelled 97.7 18 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 42 d1dkla_ not modelled 97.6 25 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 43 d1qwoa_ not modelled 97.4 15 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 44 d1qfxa_ not modelled 97.3 20 Fold:Phosphoglycerate mutase-like Superfamily:Phosphoglycerate mutase-like Family:Histidine acid phosphatase 45 c2gfiB_ not modelled 96.8 20 PDB header:hydrolase Chain: B: PDB Molecule:phytase; PDBTitle: crystal structure of the phytase from d. castellii at 2.3 a 46 c3nzeB_ not modelled 69.1 11 PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1. 47 c3bk7A_ not modelled 37.2 26 PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii 48 d1b5ta_ not modelled 31.9 13 Fold:TIM beta/alpha-barrel Superfamily:FAD-linked oxidoreductase Family:Methylenetetrahydrofolate reductase 49 c2w48D_ not modelled 30.0 10 PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae 50 d1lbqa_ not modelled 27.2 15 Fold:Chelatase-like Superfamily:Chelatase Family:Ferrochelatase 51 d1l2ta_ not modelled 25.2 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 52 c3efhB_ not modelled 20.0 18 PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 53 d2c4ka2 not modelled 18.4 20 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 54 c3ss6B_ not modelled 16.8 12 PDB header:transferase Chain: B: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystal structure of the bacillus anthracis acetyl-coa2 acetyltransferase 55 d1cr2a_ not modelled 16.3 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 56 c3ozxA_ not modelled 14.9 23 PDB header:hydrolase, translation Chain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain) 57 d1dkua2 not modelled 14.8 20 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosylpyrophosphate synthetase-like 58 c3rfuC_ not modelled 14.5 16 PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase 59 c1yqtA_ not modelled 14.3 24 PDB header:hydrolyase/translation Chain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor 60 c1f2uD_ not modelled 13.9 21 PDB header:replication Chain: D: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of rad50 abc-atpase 61 c3dhwC_ not modelled 13.3 17 PDB header:membrane protein/hydrolase Chain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni 62 d1j98a_ not modelled 12.7 16 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 63 d3b48a1 not modelled 12.7 22 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:DhaM-like 64 c3ox4D_ not modelled 12.7 16 PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 2; PDBTitle: structures of iron-dependent alcohol dehydrogenase 2 from zymomonas2 mobilis zm4 complexed with nad cofactor 65 d1vbka2 not modelled 12.7 50 Fold:THUMP domain Superfamily:THUMP domain-like Family:THUMP domain 66 c2d62A_ not modelled 12.2 15 PDB header:sugar binding protein Chain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein 67 c1yveK_ not modelled 12.2 13 PDB header:oxidoreductase Chain: K: PDB Molecule:acetohydroxy acid isomeroreductase; PDBTitle: acetohydroxy acid isomeroreductase complexed with nadph,2 magnesium and inhibitor ipoha (n-hydroxy-n-3 isopropyloxamate) 68 d3dhwc1 not modelled 12.0 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 69 c2c4kD_ not modelled 11.9 17 PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) 70 c2fmoA_ not modelled 11.8 12 PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methylenetetrahydrofolate reductase; PDBTitle: ala177val mutant of e. coli methylenetetrahydrofolate2 reductase 71 d1v93a_ not modelled 11.1 14 Fold:TIM beta/alpha-barrel Superfamily:FAD-linked oxidoreductase Family:Methylenetetrahydrofolate reductase 72 c3gd7C_ not modelled 11.1 9 PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp) 73 d1vlja_ not modelled 10.6 15 Fold:Dehydroquinate synthase-like Superfamily:Dehydroquinate synthase-like Family:Iron-containing alcohol dehydrogenase 74 d1oxxk2 not modelled 10.5 23 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 75 d1rrma_ not modelled 9.9 13 Fold:Dehydroquinate synthase-like Superfamily:Dehydroquinate synthase-like Family:Iron-containing alcohol dehydrogenase 76 c3lopA_ not modelled 9.1 12 PDB header:substrate binding protein Chain: A: PDB Molecule:substrate binding periplasmic protein; PDBTitle: crystal structure of substrate-binding periplasmic protein2 (pbp) from ralstonia solanacearum 77 c1vciA_ not modelled 9.0 13 PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp 78 c1q1bD_ not modelled 9.0 17 PDB header:transport protein Chain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form 79 c2ygrD_ not modelled 8.9 14 PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra 80 d1su7a_ not modelled 8.5 15 Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase 81 c1dkrB_ not modelled 8.4 21 PDB header:transferase Chain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase; PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation. 82 d2obba1 not modelled 8.4 8 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 83 c2nq2C_ not modelled 8.3 21 PDB header:metal transport Chain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. 84 d1vjea_ not modelled 8.1 30 Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS 85 c3bfjK_ not modelled 8.0 9 PDB header:oxidoreductase Chain: K: PDB Molecule:1,3-propanediol oxidoreductase; PDBTitle: crystal structure analysis of 1,3-propanediol oxidoreductase 86 c2ibyD_ not modelled 7.9 12 PDB header:transferase Chain: D: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystallographic and kinetic studies of human mitochondrial2 acetoacetyl-coa thiolase (t2): the importance of potassium and3 chloride for its structure and function 87 c3fvqB_ not modelled 7.7 17 PDB header:hydrolase Chain: B: PDB Molecule:fe(3+) ions import atp-binding protein fbpc; PDBTitle: crystal structure of the nucleotide binding domain fbpc2 complexed with atp 88 d1g2912 not modelled 7.5 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 89 d3d31a2 not modelled 7.4 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 90 c3hruA_ not modelled 7.2 15 PDB header:transcription Chain: A: PDB Molecule:metalloregulator scar; PDBTitle: crystal structure of scar with bound zn2+ 91 c1u9yD_ not modelled 7.1 14 PDB header:transferase Chain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii 92 c3sg0A_ not modelled 7.1 7 PDB header:signaling protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2 93 c3lfhF_ not modelled 7.1 29 PDB header:transferase Chain: F: PDB Molecule:phosphotransferase system, mannose/fructose-specific PDBTitle: crystal structure of manxa from thermoanaerobacter tengcongensis 94 c2it1B_ not modelled 7.0 21 PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii 95 d1jb7a3 not modelled 7.0 10 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 96 d3beda1 not modelled 7.0 18 Fold:PTS system fructose IIA component-like Superfamily:PTS system fructose IIA component-like Family:EIIA-man component-like 97 d1oaoa_ not modelled 6.5 13 Fold:Prismane protein-like Superfamily:Prismane protein-like Family:Carbon monoxide dehydrogenase 98 c3gfoA_ not modelled 6.5 19 PDB header:atp binding protein Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq. 99 d2awna2 not modelled 6.4 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0