Email l.a.kelley@imperial.ac.uk Description P32170 Date Thu Jan 5 11:49:48 GMT 2012 Unique Job ID e491b94b05fd5204

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1d8wa_ 100.0 98 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:L-rhamnose isomerase 2 c3p14C_ 100.0 59 PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans 3 c2i56A_ 100.0 19 PDB header:isomerase, metal-binding protein Chain: A: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase from pseudomonas2 stutzeri with l-rhamnose 4 d1xlma_ 100.0 15 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 5 d1bxca_ 100.0 13 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 6 d1bxba_ 100.0 13 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 7 c3ktcB_ 100.0 14 PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution 8 d2glka1 100.0 15 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 9 d1muwa_ 100.0 15 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 10 d1qt1a_ 100.0 14 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 11 d1xima_ 100.0 17 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 12 d1a0ea_ 99.7 15 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 13 d1a0da_ 99.7 15 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 14 d1a0ca_ 99.7 15 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 15 c3qxbB_ 98.7 13 PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution 16 c2qw5B_ 98.6 16 PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution 17 c2zvrA_ 98.5 14 PDB header:isomerase Chain: A: PDB Molecule:uncharacterized protein tm_0416; PDBTitle: crystal structure of a d-tagatose 3-epimerase-related2 protein from thermotoga maritima 18 c3cqkB_ 98.5 13 PDB header:isomerase Chain: B: PDB Molecule:l-ribulose-5-phosphate 3-epimerase ulae; PDBTitle: crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b)2 complex with zn2+ and sulfate 19 c3kwsB_ 98.2 13 PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution 20 c2hk1D_ 98.2 13 PDB header:isomerase Chain: D: PDB Molecule:d-psicose 3-epimerase; PDBTitle: crystal structure of d-psicose 3-epimerase (dpease) in the presence of2 d-fructose 21 d1i60a_ not modelled 98.2 16 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 22 d1xp3a1 not modelled 98.2 12 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Endonuclease IV 23 c2x7vA_ not modelled 98.1 13 PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc 24 d1qtwa_ not modelled 98.0 9 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Endonuclease IV 25 c3ju2A_ not modelled 97.9 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein smc04130; PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021 26 d1k77a_ not modelled 97.8 13 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Hypothetical protein YgbM (EC1530) 27 c3bzjA_ not modelled 97.7 13 PDB header:hydrolase Chain: A: PDB Molecule:uv endonuclease; PDBTitle: uvde k229l 28 c2zdsB_ not modelled 97.7 11 PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) 29 c3obeB_ not modelled 97.7 12 PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution 30 c2ou4C_ not modelled 97.5 14 PDB header:isomerase Chain: C: PDB Molecule:d-tagatose 3-epimerase; PDBTitle: crystal structure of d-tagatose 3-epimerase from2 pseudomonas cichorii 31 c3aamA_ not modelled 97.3 13 PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 32 c3ngfA_ not modelled 97.1 14 PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis 33 c3dx5A_ not modelled 97.1 15 PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein asbf; PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis 34 c3l23A_ not modelled 97.0 12 PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution 35 c3lmzA_ not modelled 96.7 11 PDB header:isomerase Chain: A: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution 36 d1tz9a_ not modelled 96.7 16 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:UxuA-like 37 c3cnyA_ not modelled 96.5 12 PDB header:biosynthetic protein Chain: A: PDB Molecule:inositol catabolism protein iole; PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution 38 c3bdkB_ not modelled 96.4 16 PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue 39 d2g0wa1 not modelled 96.0 11 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 40 d2q02a1 not modelled 93.5 14 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 41 d1yx1a1 not modelled 93.3 12 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:KguE-like 42 c3p6lA_ not modelled 89.6 11 PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution 43 c2wvsD_ not modelled 84.8 17 PDB header:hydrolase Chain: D: PDB Molecule:alpha-l-fucosidase; PDBTitle: crystal structure of an alpha-l-fucosidase gh29 trapped2 covalent intermediate from bacteroides thetaiotaomicron in3 complex with 2-fluoro-fucosyl fluoride using an e288q4 mutant 44 d1x7fa2 not modelled 73.7 27 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Outer surface protein, N-terminal domain 45 c2p0oA_ not modelled 70.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein duf871; PDBTitle: crystal structure of a conserved protein from locus ef_2437 in2 enterococcus faecalis with an unknown function 46 c1uasA_ not modelled 64.7 19 PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of rice alpha-galactosidase 47 c2vpnB_ not modelled 55.6 14 PDB header:transport Chain: B: PDB Molecule:periplasmic substrate binding protein; PDBTitle: high-resolution structure of the periplasmic ectoine-2 binding protein from teaabc trap-transporter of halomonas3 elongata 48 c2by0A_ not modelled 54.6 36 PDB header:hydrolase Chain: A: PDB Molecule:maltooligosyltrehalose trehalohydrolase; PDBTitle: is radiation damage dependent on the dose-rate used during2 macromolecular crystallography data collection 49 c3pt1A_ not modelled 50.0 30 PDB header:hydrolase Chain: A: PDB Molecule:upf0364 protein ymr027w; PDBTitle: structure of duf89 from saccharomyces cerevisiae co-crystallized with2 f6p. 50 d1ktba2 not modelled 48.2 19 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 51 c1x7fA_ not modelled 48.0 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:outer surface protein; PDBTitle: crystal structure of an uncharacterized b. cereus protein 52 c2d0gA_ not modelled 45.5 20 PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide 53 d1uasa2 not modelled 42.1 19 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 54 c3lrmB_ not modelled 41.3 11 PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase 1; PDBTitle: structure of alfa-galactosidase from saccharomyces cerevisiae with2 raffinose 55 c2ya0A_ not modelled 38.2 21 PDB header:hydrolase Chain: A: PDB Molecule:putative alkaline amylopullulanase; PDBTitle: catalytic module of the multi-modular glycogen-degrading2 pneumococcal virulence factor spua 56 c3emzA_ not modelled 37.6 18 PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-xylanase; PDBTitle: crystal structure of xylanase xynb from paenibacillus2 barcinonensis complexed with a conduramine derivative 57 d1kwga2 not modelled 37.6 9 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 58 d1q2ha_ not modelled 36.9 15 Fold:Dimerisation interlock Superfamily:Phenylalanine zipper Family:Adapter protein APS, dimerisation domain 59 c3czkA_ not modelled 36.4 9 PDB header:hydrolase Chain: A: PDB Molecule:sucrose hydrolase; PDBTitle: crystal structure analysis of sucrose hydrolase(suh) e322q-2 sucrose complex 60 c3k1dA_ not modelled 34.3 18 PDB header:transferase Chain: A: PDB Molecule:1,4-alpha-glucan-branching enzyme; PDBTitle: crystal structure of glycogen branching enzyme synonym: 1,4-alpha-d-2 glucan:1,4-alpha-d-glucan 6-glucosyl-transferase from mycobacterium3 tuberculosis h37rv 61 d2fywa1 not modelled 33.7 26 Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like 62 d1bf2a3 not modelled 33.6 19 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 63 c3r66A_ not modelled 33.2 20 PDB header:viral protein/antiviral protein Chain: A: PDB Molecule:non-structural protein 1; PDBTitle: crystal structure of human isg15 in complex with ns1 n-terminal region2 from influenza virus b, northeast structural genomics consortium3 target ids hx6481, hr2873, and or2 64 d1cyga4 not modelled 33.1 32 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 65 d1xeqa1 not modelled 33.0 20 Fold:S15/NS1 RNA-binding domain Superfamily:S15/NS1 RNA-binding domain Family:N-terminal, RNA-binding domain of nonstructural protein NS1 66 c1h2aS_ not modelled 32.5 24 PDB header:oxidoreductase Chain: S: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris 67 c2if8B_ not modelled 32.2 16 PDB header:transferase Chain: B: PDB Molecule:inositol polyphosphate multikinase; PDBTitle: crystal structure of inositol phosphate multikinase ipk2 in complex2 with adp and mn2+ from s. cerevisiae 68 c3m07A_ not modelled 31.9 26 PDB header:unknown function Chain: A: PDB Molecule:putative alpha amylase; PDBTitle: 1.4 angstrom resolution crystal structure of putative alpha2 amylase from salmonella typhimurium. 69 c3a23A_ not modelled 31.7 17 PDB header:hydrolase Chain: A: PDB Molecule:putative secreted alpha-galactosidase; PDBTitle: crystal structure of beta-l-arabinopyranosidase complexed with d-2 galactose 70 d1jvaa2 not modelled 31.0 32 Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Intein endonuclease 71 d1wuis1 not modelled 30.7 24 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 72 c1ktbA_ not modelled 30.7 23 PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: the structure of alpha-n-acetylgalactosaminidase 73 d1wzaa2 not modelled 30.5 26 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 74 c3rgwS_ not modelled 30.3 23 PDB header:oxidoreductase/oxidoreductase Chain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster 75 c2vncB_ not modelled 29.9 25 PDB header:hydrolase Chain: B: PDB Molecule:glycogen operon protein glgx; PDBTitle: crystal structure of glycogen debranching enzyme trex from2 sulfolobus solfataricus 76 d1e3da_ not modelled 29.9 32 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 77 d1y0na_ not modelled 28.3 19 Fold:YehU-like Superfamily:YehU-like Family:YehU-like 78 d2aaaa2 not modelled 27.9 18 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 79 d1uoza_ not modelled 27.5 17 Fold:7-stranded beta/alpha barrel Superfamily:Glycosyl hydrolases family 6, cellulases Family:Glycosyl hydrolases family 6, cellulases 80 c3myrE_ not modelled 26.9 25 PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state 81 c3a5vA_ not modelled 26.9 15 PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of alpha-galactosidase i from mortierella vinacea 82 d1eh9a3 not modelled 26.3 31 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 83 d1r46a2 not modelled 26.3 11 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Amylase, catalytic domain 84 c2kelB_ not modelled 25.6 17 PDB header:transcription repressor Chain: B: PDB Molecule:uncharacterized protein 56b; PDBTitle: structure of the transcription regulator svtr from the2 hyperthermophilic archaeal virus sirv1 85 c2e8yA_ not modelled 25.2 14 PDB header:hydrolase Chain: A: PDB Molecule:amyx protein; PDBTitle: crystal structure of pullulanase type i from bacillus subtilis str.2 168 86 c1wzaA_ not modelled 25.1 23 PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase a; PDBTitle: crystal structure of alpha-amylase from h.orenii 87 d1tjoa_ not modelled 25.1 11 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ferritin 88 d1frfs_ not modelled 24.9 32 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 89 c3uowB_ not modelled 24.8 7 PDB header:ligase Chain: B: PDB Molecule:gmp synthetase; PDBTitle: crystal structure of pf10_0123, a gmp synthetase from plasmodium2 falciparum 90 d1yq9a1 not modelled 24.4 24 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 91 c3qomA_ not modelled 24.2 23 PDB header:hydrolase Chain: A: PDB Molecule:6-phospho-beta-glucosidase; PDBTitle: crystal structure of 6-phospho-beta-glucosidase from lactobacillus2 plantarum 92 c2nydB_ not modelled 23.7 13 PDB header:unknown function Chain: B: PDB Molecule:upf0135 protein sa1388; PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388 93 c2kebA_ not modelled 23.1 24 PDB header:dna binding protein Chain: A: PDB Molecule:dna polymerase subunit alpha b; PDBTitle: nmr solution structure of the n-terminal domain of the dna polymerase2 alpha p68 subunit 94 c1t0oA_ not modelled 22.4 15 PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: the structure of alpha-galactosidase from trichoderma reesei complexed2 with beta-d-galactose 95 d1z8ma1 not modelled 22.2 12 Fold:RelE-like Superfamily:RelE-like Family:RelE-like 96 d1xyna_ not modelled 22.0 33 Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Xylanase/endoglucanase 11/12 97 c3civA_ not modelled 21.3 12 PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of the endo-beta-1,4-mannanase from2 alicyclobacillus acidocaldarius 98 c3uj2C_ not modelled 20.9 15 PDB header:lyase Chain: C: PDB Molecule:enolase 1; PDBTitle: crystal structure of an enolase from anaerostipes caccae (efi target2 efi-502054) with bound mg and sulfate 99 c2cncA_ not modelled 20.8 10 PDB header:hydrolase Chain: A: PDB Molecule:endoxylanase; PDBTitle: family 10 xylanase 100 c3eypB_ not modelled 20.8 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative alpha-l-fucosidase; PDBTitle: crystal structure of putative alpha-l-fucosidase from bacteroides2 thetaiotaomicron 101 c3d1nK_ not modelled 20.2 26 PDB header:transcription regulator/dna Chain: K: PDB Molecule:pou domain, class 6, transcription factor 1; PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter 102 d1xyza_ not modelled 20.0 11 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases 103 c1xyzA_ not modelled 20.0 11 PDB header:glycosyltransferase Chain: A: PDB Molecule:1,4-beta-d-xylan-xylanohydrolase; PDBTitle: a common protein fold and similar active site in two2 distinct families of beta-glycanases