Fold library entry viewer: c2vncB_

Added to library: Tue Mar 16 12:01:02 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	R	D	R	P	L	R	P	G	D	P	Y	P	L	G	S	N	W	I	E	D	D	D	G	V	N	F	S	L	F	S	E	N	A	E	K	V	E	L	L	L	Y	S	L	T	N	Q	K	Y	P	K	E	I	I	E	V	K	N	K	T	G	D	I	W	H	V	F	V	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			B				S		S	S						T	T	T	T									T	T		S									S	S			S	S		S										T	T								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	P	G	Q	L	Y	A	Y	R	V	Y	G	P	Y	K	P	E	L	G	L	R	F	N	P	N	K	V	L	I	D	P	Y	A	K	A	I	N	G	S	V	I	W	N	D	A	V	F	G	Y	K	I	G	D	Q	N	Q	D	L	T	Y	D	E	R	D	S	G	E	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T													G	G	G	T					T	T	S		B			T	T		S		B		S						T	T	S	B	S	S		S	S	S	T	T	T	T	T	S							T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	K	S	V	V	I	N	P	Y	F	E	W	D	D	E	D	F	I	K	G	K	K	V	P	L	K	D	T	V	I	Y	E	V	H	V	K	G	F	T	K	L	R	L	D	L	P	E	N	I	R	G	T	Y	E	G	L	A	S	E	Q	M	I	S	Y	L	K	D	L	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T					S	S					T	T	T													S	S			S	S		T	T	T	T	T	S					T	S	S										T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	T	V	E	L	M	P	V	F	H	F	I	D	Q	R	F	L	T	D	K	G	L	T	N	Y	W	G	Y	D	P	I	N	F	F	S	P	E	C	R	Y	S	S	T	G	C	L	G	G	Q	V	L	S	F	K	K	M	V	N	E	L	H	N	A	G	I	E	V	I	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B		B								T	T	S					S				B	S		S	S	S	B		G	G	G		T	T		S	S	S																	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	V	Y	N	H	T	A	E	G	N	H	L	G	P	T	L	S	F	R	G	I	D	N	T	A	Y	Y	M	L	Q	P	D	N	K	R	Y	Y	L	D	F	T	G	T	G	N	T	L	N	L	S	H	P	R	V	I	Q	M	V	L	D	S	L	R	Y	W	V	T	E	M	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			T	T		S	S	S		B		S	S						S	T	T	T	B				T	T								S	S	S	S	S			B		T	T	S																	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	D	G	F	R	F	D	L	A	A	A	L	A	R	E	L	Y	S	V	N	M	L	N	T	F	F	I	A	L	Q	Q	D	P	I	L	S	Q	V	K	L	I	A	E	P	W	D	V	G	Q	G	G	Y	Q	V	G	N	F	P	Y	Q	W	A	E	W	N	G	K	Y	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T										T	T	T												S	T	T	T	T	T	S										S	S	S	S				S				T	T						T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	I	R	R	F	W	R	G	E	A	L	P	Y	S	E	I	A	N	R	L	L	G	S	P	D	I	N	N	K	T	P	F	A	S	I	N	Y	V	T	S	H	D	G	F	T	L	E	D	L	V	S	Y	N	H	N	E	A	N	G	F	N	N	Q	D	G	M	N	E	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		S				T	T								T		T	T					S	G	G	G					S			T	T	S		S	S	S	S	S	S	S					S	S	S	T	T	T	T			S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	W	N	C	G	D	Q	N	V	V	I	C	R	E	K	Q	K	R	N	F	M	I	T	L	L	V	S	Q	G	T	P	M	I	L	G	G	D	E	L	S	R	T	Q	R	G	N	N	N	A	F	C	Q	D	N	E	I	T	W	F	D	W	N	L	D	E	R	K	S	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	T	T					S	S							T	T	S	S	S						T	T	T	T	T	T				T	T		S			T	T			S	T	T	T	S				S			S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	E	F	V	K	K	M	I	Q	F	Y	R	A	H	P	A	F	R	R	E	R	D	V	T	F	Y	T	L	E	G	R	E	V	D	E	K	T	W	S	S	P	T	Q	L	V	I	F	V	L	E	G	D	S	F	L	I	I	L	N	A	N	P	N	N	V	K	V	K	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		G	G	G	S	S									T	T	T					S	S	T	T	S			S																				S	S					B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
Sequence	K	G	K	W	E	L	V	I	S	S	Y	L	R	E	I	K	P	E	E	G	E	K	E	L	E	I	E	G	R	T	A	L	V	Y	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			B							S	S				S						B					S	S

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PDB structure

FASTA sequence

Hidden Markov model

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