Fold library entry viewer: c3k1dA_

Added to library: Sat Aug 28 17:39:09 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	H	L	A	P	E	P	A	E	M	A	R	L	V	A	G	T	H	H	N	P	H	G	I	L	G	A	H	E	Y	D	D	H	T	V	I	R	A	F	R	P	H	A	V	E	V	V	A	L	V	G	K	D	R	F	S	L	Q	H	L	D	S	G	L	F	A	V	A	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S												T			S						S					S	S	S	S								T	T		S	B					B	T	T	B								T	T	S							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	V	D	L	I	D	Y	R	L	Q	V	T	Y	E	G	C	E	P	H	T	V	A	D	A	Y	R	F	L	P	T	L	G	E	V	D	L	H	L	F	A	E	G	R	H	E	R	L	W	E	V	L	G	A	H	P	R	S	F	T	T	A	D	G	V	V	S	G	V	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S										B		T	T	S								G	G	G	S			S	S										T	T			T	T	G	G	G	T	S										S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	V	W	A	P	N	A	K	G	V	S	L	I	G	E	F	N	G	W	N	G	H	E	A	P	M	R	V	L	G	P	S	G	V	W	E	L	F	W	P	D	F	P	C	D	G	L	Y	K	F	R	V	H	G	A	D	G	V	V	T	D	R	A	D	P	F	A	F	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S							G	G	G	T	T				S		B					G	G	G									T			T	T										T	T	S								T	T		S	S	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	V	P	P	Q	T	A	S	R	V	T	S	S	D	Y	T	W	G	D	D	D	W	M	A	G	R	A	L	R	N	P	V	N	E	A	M	S	T	Y	E	V	H	L	G	S	W	R	P	G	L	S	Y	R	Q	L	A	R	E	L	T	D	Y	I	V	D	Q	G	F	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T														S									T	T			G	G	G	S									T	T	T	S	S	T	T																		T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	E	L	L	P	V	A	E	H	P	F	A	G	S	W	G	Y	Q	V	T	S	Y	Y	A	P	T	S	R	F	G	T	P	D	D	F	R	A	L	V	D	A	L	H	Q	A	G	I	G	V	I	V	D	W	V	P	A	H	F	P	K	D	A	W	A	L	G	R	F	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						S		G	G	G	T	T		S		S							G	G	G																T	T									T	T						T	T	T	T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	P	L	Y	E	H	S	D	P	K	R	G	E	Q	L	D	W	G	T	Y	V	F	D	F	G	R	P	E	V	R	N	F	L	V	A	N	A	L	Y	W	L	Q	E	F	H	I	D	G	L	R	V	D	A	V	A	S	M	L	Y	L	D	Y	S	R	P	E	G	G	W	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S	B						S	S	S	T	T							B		T	T	S																		S										T					B							S	S			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	N	V	H	G	G	R	E	N	L	E	A	V	Q	F	L	Q	E	M	N	A	T	A	H	K	V	A	P	G	I	V	T	I	A	E	E	S	T	P	W	S	G	V	T	R	P	T	N	I	G	G	L	G	F	S	M	K	W	N	M	G	W	M	H	D	T	L	D	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		S	B																			S	T	T									S	S				T	T	S		G	G	G	T					S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	R	D	P	V	Y	R	S	Y	H	H	H	E	M	T	F	S	M	L	Y	A	F	S	E	N	Y	V	L	P	L	S	H	D	E	V	V	H	G	K	G	T	L	W	G	R	M	P	G	N	N	H	V	K	A	A	G	L	R	S	L	L	A	Y	Q	W	A	H	P	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		G	G	G	G	G	G	G						G	G	G	G	T	T	T	S	S								G	G	G	S	S	T	T	S							S		S	S																		S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	L	L	F	M	G	Q	E	F	G	Q	R	A	E	W	S	E	Q	R	G	L	D	W	F	Q	L	D	E	N	G	F	S	N	G	I	Q	R	L	V	R	D	I	N	D	I	Y	R	C	H	P	A	L	W	S	L	D	T	T	P	E	G	Y	S	W	I	D	A	N	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	G	G	G	T			S				T	T	T				G	G	G	G	G	S	S	S	S																			G	G	G	T	T	T	T	T	S	G	G	G									T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	N	N	V	L	S	F	M	R	Y	G	S	D	G	S	V	L	A	C	V	F	N	F	A	G	A	E	H	R	D	Y	R	L	G	L	P	R	A	G	R	W	R	E	V	L	N	T	D	A	T	I	Y	H	G	S	G	I	G	N	L	G	G	V	D	A	T	D	D	P	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T									T	T	S										S	S	S										S	S										T	T		G	G	G	T	S				S		T	T						S			B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
Sequence	H	G	R	P	A	S	A	V	L	V	L	P	P	T	S	A	L	W	L	T	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	B	S									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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