Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP77399
DateThu Jan 5 12:28:38 GMT 2012
Unique Job IDd20ec6bdf1ab288b

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2d3tB_
Top template information
PDB header:lyase, oxidoreductase/transferase
Chain: B: PDB Molecule:fatty oxidation complex alpha subunit;
PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v
Confidence and coverage
Confidence:100.0% Coverage: 98%
699 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSA
Secondary structure 

























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Disorder  ?????






















































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   .........70.........80.........90.........100.........110.........120
Sequence  KPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQVIAAIHGACLGGGLELA
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   .........130.........140.........150.........160.........170.........180
Sequence  LACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAL
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?




















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   .........190.........200.........210.........220.........230.........240
Sequence  KLGLVDDVVPHSILLEAAVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKT
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????????????
???

















?
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   .........250.........260.........270.........280.........290.........300
Sequence  QGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG
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Disorder  ?

















































?????????
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   .........310.........320.........330.........340.........350.........360
Sequence  SDAPPAPLNSVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKV
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Disorder  ?????






















































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   .........370.........380.........390.........400.........410.........420
Sequence  RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF
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Disorder 
?????





















































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   .........430.........440.........450.........460.........470.........480
Sequence  ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ
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   .........490.........500.........510.........520.........530.........540
Sequence  GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG
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   .........550.........560.........570.........580.........590.........600
Sequence  IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPA
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   .........610.........620.........630.........640.........650.........660
Sequence  IYPLIGTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLG
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Disorder 





?
??
?















































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   .........670.........680.........690.........700.........710....
Sequence  GPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARGESFWKTTATDLQ
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?

????????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2d3t chain B

3D model

Region: 1 - 707
Aligned: 699
Modelled: 707
Confidence: 100.0%
Identity: 36%
PDB header:lyase, oxidoreductase/transferase
Chain: B: PDB Molecule:fatty oxidation complex alpha subunit;
PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v

Phyre2

PDB 2x58 chain B

3D model

Region: 4 - 708
Aligned: 687
Modelled: 700
Confidence: 100.0%
Identity: 33%
PDB header:oxidoreductase
Chain: B: PDB Molecule:peroxisomal bifunctional enzyme;
PDBTitle: the crystal structure of mfe1 liganded with coa

Phyre2

PDB 2wtb chain A

3D model

Region: 7 - 707
Aligned: 666
Modelled: 684
Confidence: 100.0%
Identity: 32%
PDB header:oxidoreductase
Chain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2);
PDBTitle: arabidopsis thaliana multifuctional protein, mfp2

Phyre2

PDB 1zcj chain A

3D model

Region: 279 - 708
Aligned: 426
Modelled: 429
Confidence: 100.0%
Identity: 33%
PDB header:oxidoreductase
Chain: A: PDB Molecule:peroxisomal bifunctional enzyme;
PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase

Phyre2

PDB 3k6j chain A

3D model

Region: 275 - 697
Aligned: 412
Modelled: 420
Confidence: 100.0%
Identity: 27%
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence;
PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans

Phyre2

PDB 3mog chain A

3D model

Region: 307 - 705
Aligned: 394
Modelled: 399
Confidence: 100.0%
Identity: 34%
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable 3-hydroxybutyryl-coa dehydrogenase;
PDBTitle: crystal structure of 3-hydroxybutyryl-coa dehydrogenase from2 escherichia coli k12 substr. mg1655

Phyre2

PDB 1m75 chain B

3D model

Region: 308 - 587
Aligned: 279
Modelled: 280
Confidence: 100.0%
Identity: 38%
PDB header:oxidoreductase
Chain: B: PDB Molecule:3-hydroxyacyl-coa dehydrogenase;
PDBTitle: crystal structure of the n208s mutant of l-3-hydroxyacyl-2 coa dehydrogenase in complex with nad and acetoacetyl-coa

Phyre2

PDB 1zej chain A

3D model

Region: 310 - 606
Aligned: 274
Modelled: 278
Confidence: 100.0%
Identity: 29%
PDB header:oxidoreductase
Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase;
PDBTitle: crystal structure of the 3-hydroxyacyl-coa dehydrogenase (hbd-9,2 af2017) from archaeoglobus fulgidus dsm 4304 at 2.00 a resolution

Phyre2

PDB 1wdk chain A domain 4

3D model

Region: 1 - 304
Aligned: 301
Modelled: 304
Confidence: 100.0%
Identity: 31%
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Crotonase-like

Phyre2

PDB 2ep9 chain A

3D model

Region: 310 - 586
Aligned: 275
Modelled: 277
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase;
PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form)

Phyre2

PDB 3bpt chain A

3D model

Region: 4 - 303
Aligned: 295
Modelled: 300
Confidence: 100.0%
Identity: 20%
PDB header:hydrolase
Chain: A: PDB Molecule:3-hydroxyisobutyryl-coa hydrolase;
PDBTitle: crystal structure of human beta-hydroxyisobutyryl-coa hydrolase in2 complex with quercetin

Phyre2

PDB 1nzy chain A

3D model

Region: 3 - 305
Aligned: 264
Modelled: 269
Confidence: 100.0%
Identity: 24%
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Crotonase-like

Phyre2

PDB 3moy chain A

3D model

Region: 2 - 298
Aligned: 256
Modelled: 263
Confidence: 100.0%
Identity: 29%
PDB header:lyase
Chain: A: PDB Molecule:probable enoyl-coa hydratase;
PDBTitle: crystal structure of probable enoyl-coa hydratase from mycobacterium2 smegmatis

Phyre2

PDB 3g64 chain A

3D model

Region: 4 - 298
Aligned: 256
Modelled: 260
Confidence: 100.0%
Identity: 25%
PDB header:lyase
Chain: A: PDB Molecule:putative enoyl-coa hydratase;
PDBTitle: crystal structure of putative enoyl-coa hydratase from streptomyces2 coelicolor a3(2)

Phyre2

PDB 3kqf chain C

3D model

Region: 5 - 298
Aligned: 256
Modelled: 257
Confidence: 100.0%
Identity: 31%
PDB header:isomerase
Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: 1.8 angstrom resolution crystal structure of enoyl-coa hydratase from2 bacillus anthracis.

Phyre2

PDB 3ju1 chain A

3D model

Region: 8 - 305
Aligned: 294
Modelled: 297
Confidence: 100.0%
Identity: 19%
PDB header:lyase, isomerase
Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: crystal structure of enoyl-coa hydratase/isomerase family protein

Phyre2

PDB 2ppy chain E

3D model

Region: 1 - 298
Aligned: 260
Modelled: 261
Confidence: 100.0%
Identity: 32%
PDB header:lyase
Chain: E: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of enoyl-coa hydrates (gk_1992) from geobacillus2 kaustophilus hta426

Phyre2

PDB 3hin chain A

3D model

Region: 1 - 296
Aligned: 254
Modelled: 260
Confidence: 100.0%
Identity: 26%
PDB header:lyase
Chain: A: PDB Molecule:putative 3-hydroxybutyryl-coa dehydratase;
PDBTitle: crystal structure of putative enoyl-coa hydratase from2 rhodopseudomonas palustris cga009

Phyre2

PDB 2hw5 chain F

3D model

Region: 5 - 298
Aligned: 253
Modelled: 260
Confidence: 100.0%
Identity: 26%
PDB header:lyase
Chain: F: PDB Molecule:enoyl-coa hydratase;
PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1

Phyre2

PDB 2vx2 chain D

3D model

Region: 4 - 294
Aligned: 251
Modelled: 257
Confidence: 100.0%
Identity: 25%
PDB header:isomerase
Chain: D: PDB Molecule:enoyl-coa hydratase domain-containing protein 3;
PDBTitle: crystal structure of human enoyl coenzyme a hydratase2 domain-containing protein 3 (echdc3)

Phyre2
1

c2d3tB_
2

c2x58B_
3

c2wtbA_
4

c1zcjA_
5

c3k6jA_
6

c3mogA_
7

c1m75B_
8

c1zejA_
9

d1wdka4
10

c2ep9A_
11

c3bptA_
12

d1nzya_
13

c3moyA_
14

c3g64A_
15

c3kqfC_
16

c3ju1A_
17

c2ppyE_
18

c3hinA_
19

c2hw5F_
20

c2vx2D_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2d3tB_



100.0 36 PDB header:lyase, oxidoreductase/transferase
Chain: B: PDB Molecule:fatty oxidation complex alpha subunit;
PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v
2c2x58B_



100.0 33 PDB header:oxidoreductase
Chain: B: PDB Molecule:peroxisomal bifunctional enzyme;
PDBTitle: the crystal structure of mfe1 liganded with coa
3c2wtbA_



100.0 32 PDB header:oxidoreductase
Chain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2);
PDBTitle: arabidopsis thaliana multifuctional protein, mfp2
4c1zcjA_



100.0 33 PDB header:oxidoreductase
Chain: A: PDB Molecule:peroxisomal bifunctional enzyme;
PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase
5c3k6jA_



100.0 27 PDB header:oxidoreductase
Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence;
PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans
6c3mogA_



100.0 34 PDB header:oxidoreductase
Chain: A: PDB Molecule:probable 3-hydroxybutyryl-coa dehydrogenase;
PDBTitle: crystal structure of 3-hydroxybutyryl-coa dehydrogenase from2 escherichia coli k12 substr. mg1655
7c1m75B_



100.0 38 PDB header:oxidoreductase
Chain: B: PDB Molecule:3-hydroxyacyl-coa dehydrogenase;
PDBTitle: crystal structure of the n208s mutant of l-3-hydroxyacyl-2 coa dehydrogenase in complex with nad and acetoacetyl-coa
8c1zejA_



100.0 29 PDB header:oxidoreductase
Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase;
PDBTitle: crystal structure of the 3-hydroxyacyl-coa dehydrogenase (hbd-9,2 af2017) from archaeoglobus fulgidus dsm 4304 at 2.00 a resolution
9d1wdka4



100.0 31 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
10c2ep9A_



100.0 26 PDB header:oxidoreductase
Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase;
PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form)
11c3bptA_



100.0 20 PDB header:hydrolase
Chain: A: PDB Molecule:3-hydroxyisobutyryl-coa hydrolase;
PDBTitle: crystal structure of human beta-hydroxyisobutyryl-coa hydrolase in2 complex with quercetin
12d1nzya_



100.0 24 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
13c3moyA_



100.0 29 PDB header:lyase
Chain: A: PDB Molecule:probable enoyl-coa hydratase;
PDBTitle: crystal structure of probable enoyl-coa hydratase from mycobacterium2 smegmatis
14c3g64A_



100.0 25 PDB header:lyase
Chain: A: PDB Molecule:putative enoyl-coa hydratase;
PDBTitle: crystal structure of putative enoyl-coa hydratase from streptomyces2 coelicolor a3(2)
15c3kqfC_



100.0 31 PDB header:isomerase
Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: 1.8 angstrom resolution crystal structure of enoyl-coa hydratase from2 bacillus anthracis.
16c3ju1A_



100.0 19 PDB header:lyase, isomerase
Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: crystal structure of enoyl-coa hydratase/isomerase family protein
17c2ppyE_



100.0 32 PDB header:lyase
Chain: E: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of enoyl-coa hydrates (gk_1992) from geobacillus2 kaustophilus hta426
18c3hinA_



100.0 26 PDB header:lyase
Chain: A: PDB Molecule:putative 3-hydroxybutyryl-coa dehydratase;
PDBTitle: crystal structure of putative enoyl-coa hydratase from2 rhodopseudomonas palustris cga009
19c2hw5F_



100.0 26 PDB header:lyase
Chain: F: PDB Molecule:enoyl-coa hydratase;
PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1
20c2vx2D_



100.0 25 PDB header:isomerase
Chain: D: PDB Molecule:enoyl-coa hydratase domain-containing protein 3;
PDBTitle: crystal structure of human enoyl coenzyme a hydratase2 domain-containing protein 3 (echdc3)
21d1xx4a_



not modelled 100.0 25 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
22c3mybA_



not modelled 100.0 24 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of enoyl-coa hydratase mycobacterium smegmatis
23c2ej5B_



not modelled 100.0 28 PDB header:lyase
Chain: B: PDB Molecule:enoyl-coa hydratase subunit ii;
PDBTitle: crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii)2 from geobacillus kaustophilus
24c2qq3F_



not modelled 100.0 30 PDB header:lyase
Chain: F: PDB Molecule:enoyl-coa hydratase subunit i;
PDBTitle: crystal structure of enoyl-coa hydrates subunit i (gk_2039)2 other form from geobacillus kaustophilus hta426
25d1hzda_



not modelled 100.0 31 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
26d1uiya_



not modelled 100.0 26 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
27c3i47A_



not modelled 100.0 22 PDB header:lyase
Chain: A: PDB Molecule:enoyl coa hydratase/isomerase (crotonase);
PDBTitle: crystal structure of putative enoyl coa hydratase/isomerase2 (crotonase) from legionella pneumophila subsp. pneumophila str.3 philadelphia 1
28c3h81A_



not modelled 100.0 30 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase echa8;
PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis
29c2iexA_



not modelled 100.0 24 PDB header:lyase
Chain: A: PDB Molecule:dihydroxynapthoic acid synthetase;
PDBTitle: crystal structure of dihydroxynapthoic acid synthetase (gk2873) from2 geobacillus kaustophilus hta426
30c3hrxD_



not modelled 100.0 27 PDB header:lyase
Chain: D: PDB Molecule:probable enoyl-coa hydratase;
PDBTitle: crystal structure of phenylacetic acid degradation protein paag
31d1dcia_



not modelled 100.0 27 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
32d1wz8a1



not modelled 100.0 19 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
33c3qxzA_



not modelled 100.0 24 PDB header:lyase,isomerase
Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
34c3peaD_



not modelled 100.0 35 PDB header:isomerase
Chain: D: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: crystal structure of enoyl-coa hydratase from bacillus anthracis str.2 'ames ancestor'
35c3trrA_



not modelled 100.0 27 PDB header:isomerase
Chain: A: PDB Molecule:probable enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
36c3gkbA_



not modelled 100.0 27 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative enoyl-coa hydratase;
PDBTitle: crystal structure of a putative enoyl-coa hydratase from streptomyces2 avermitilis
37c3r0oA_



not modelled 100.0 30 PDB header:lyase
Chain: A: PDB Molecule:carnitinyl-coa dehydratase;
PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium
38c3p5mB_



not modelled 100.0 22 PDB header:isomerase
Chain: B: PDB Molecule:enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium avium
39d1mj3a_



not modelled 100.0 29 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
40d2fw2a1



not modelled 100.0 15 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
41c2w3pB_



not modelled 100.0 30 PDB header:lyase
Chain: B: PDB Molecule:benzoyl-coa-dihydrodiol lyase;
PDBTitle: boxc crystal structure
42c3rsiA_



not modelled 100.0 31 PDB header:isomerase
Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase;
PDBTitle: the structure of a putative enoyl-coa hydratase/isomerase from2 mycobacterium abscessus atcc 19977 / dsm 44196
43c3rrvC_



not modelled 100.0 23 PDB header:isomerase
Chain: C: PDB Molecule:enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase from2 mycobacterium paratuberculosis
44c3swxB_



not modelled 100.0 22 PDB header:isomerase
Chain: B: PDB Molecule:probable enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
45c3lkeA_



not modelled 100.0 23 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of enoyl-coa hydratase from bacillus2 halodurans
46d1q52a_



not modelled 100.0 18 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
47c3sllC_



not modelled 100.0 26 PDB header:isomerase
Chain: C: PDB Molecule:probable enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of a probable enoyl-coa hydratase/isomerase from2 mycobacterium abscessus
48c3qxiA_



not modelled 100.0 28 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase echa1;
PDBTitle: crystal structure of enoyl-coa hydratase echa1 from mycobacterium2 marinum
49d1ef8a_



not modelled 100.0 21 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
50c3h0uB_



not modelled 100.0 25 PDB header:lyase
Chain: B: PDB Molecule:putative enoyl-coa hydratase;
PDBTitle: crystal structure of a putative enoyl-coa hydratase from2 streptomyces avermitilis
51c2fbmB_



not modelled 100.0 15 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:y chromosome chromodomain protein 1, telomeric isoform b;
PDBTitle: acetyltransferase domain of cdy1
52c2f6qA_



not modelled 100.0 19 PDB header:isomerase
Chain: A: PDB Molecule:peroxisomal 3,2-trans-enoyl-coa isomerase;
PDBTitle: the crystal structure of human peroxisomal delta3, delta2 enoyl coa2 isomerase (peci)
53c3q1tB_



not modelled 100.0 20 PDB header:lyase
Chain: B: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium avium
54c2q35A_



not modelled 100.0 22 PDB header:lyase
Chain: A: PDB Molecule:curf;
PDBTitle: crystal structure of the y82f variant of ech2 decarboxylase domain of2 curf from lyngbya majuscula
55d1sg4a1



not modelled 100.0 24 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
56c3njbA_



not modelled 100.0 18 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium smegmatis,2 iodide soak
57d2f6qa1



not modelled 100.0 19 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
58c3oc7A_



not modelled 100.0 23 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of an enoyl-coa hydratase from mycobacterium avium
59c3he2C_



not modelled 100.0 24 PDB header:lyase
Chain: C: PDB Molecule:enoyl-coa hydratase echa6;
PDBTitle: crystal structure of enoyl-coa hydratase from mycobacterium2 tuberculosis
60c3l3sF_



not modelled 100.0 22 PDB header:isomerase
Chain: F: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: crystal structure of an enoyl-coa hydrotase/isomerase family2 protein from silicibacter pomeroyi
61c3r6hA_



not modelled 100.0 22 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase, echa3;
PDBTitle: crystal structure of an enoyl-coa hydratase (echa3) from mycobacterium2 marinum
62c2j5iF_



not modelled 100.0 21 PDB header:lyase
Chain: F: PDB Molecule:p-hydroxycinnamoyl coa hydratase/lyase;
PDBTitle: crystal structure of hydroxycinnamoyl-coa hydratase-lyase
63d1pjha_



not modelled 100.0 16 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
64c3m6nA_



not modelled 100.0 21 PDB header:lyase
Chain: A: PDB Molecule:rpff protein;
PDBTitle: crystal structure of rpff
65c3ot6A_



not modelled 100.0 22 PDB header:isomerase
Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase family protein;
PDBTitle: crystal structure of an enoyl-coa hydratase/isomerase family protein2 from psudomonas syringae
66c3qkaB_



not modelled 100.0 28 PDB header:lyase
Chain: B: PDB Molecule:enoyl-coa hydratase, echa5;
PDBTitle: crystal structure of enoyl-coa hydratase echa5 from mycobacterium2 marinum
67d2a7ka1



not modelled 100.0 23 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
68c3h02F_



not modelled 100.0 22 PDB header:lyase
Chain: F: PDB Molecule:naphthoate synthase;
PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium.
69c2pg8C_



not modelled 100.0 22 PDB header:ligand binding protein
Chain: C: PDB Molecule:dpgc;
PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog
70c3isaA_



not modelled 100.0 23 PDB header:hydrolase
Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of putative enoyl-coa hydratase/isomerase from2 bordetella parapertussis
71c3hp0B_



not modelled 100.0 21 PDB header:lyase
Chain: B: PDB Molecule:putative polyketide biosynthesis enoyl-coa
PDBTitle: crystal structure of a putative polyketide biosynthesis2 enoyl-coa hydratase (pksh) from bacillus subtilis
72c3p85A_



not modelled 100.0 30 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure enoyl-coa hydratase from mycobacterium avium
73c3fduF_



not modelled 100.0 26 PDB header:isomerase
Chain: F: PDB Molecule:putative enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of a putative enoyl-coa hydratase/isomerase from2 acinetobacter baumannii
74c3laoA_



not modelled 100.0 25 PDB header:lyase, isomerase
Chain: A: PDB Molecule:enoyl-coa hydratase/isomerase;
PDBTitle: crystal structure of enoyl-coa hydratase from pseudomonas2 aeruginosa pa01
75d1szoa_



not modelled 100.0 21 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
76c1rjnC_



not modelled 100.0 17 PDB header:lyase
Chain: C: PDB Molecule:menb;
PDBTitle: the crystal structure of menb (rv0548c) from mycobacterium2 tuberculosis in complex with the coa portion of naphthoyl coa
77c2j5gL_



not modelled 100.0 21 PDB header:hydrolase
Chain: L: PDB Molecule:alr4455 protein;
PDBTitle: the native structure of a beta-diketone hydrolase from the2 cyanobacterium anabaena sp. pcc 7120
78c3omeE_



not modelled 100.0 24 PDB header:lyase
Chain: E: PDB Molecule:enoyl-coa hydratase;
PDBTitle: crystal structure of a probable enoyl-coa hydratase from mycobacterium2 smegmatis
79d1rjma_



not modelled 100.0 17 Fold:ClpP/crotonase
Superfamily:ClpP/crotonase
Family:Crotonase-like
80c3qreA_



not modelled 100.0 28 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase, echa12_1;
PDBTitle: crystal structure of an enoyl-coa hydratase echa12_1 from2 mycobacterium marinum
81c3qmjA_



not modelled 100.0 18 PDB header:lyase
Chain: A: PDB Molecule:enoyl-coa hydratase, echa8_6;
PDBTitle: crystal structure of enoyl-coa hydratase echa8_6 from mycobacterium2 marinum
82d1wdka3



not modelled 100.0 42 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
83d1f0ya2



not modelled 100.0 38 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
84d1wdka1



not modelled 100.0 35 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:HCDH C-domain-like
85d1f0ya1



not modelled 99.9 40 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:HCDH C-domain-like
86d3hdha1



not modelled 99.9 39 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:HCDH C-domain-like
87d1wdka2



not modelled 99.9 35 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:HCDH C-domain-like
88c1vpdA_



not modelled 99.9 17 PDB header:oxidoreductase
Chain: A: PDB Molecule:tartronate semialdehyde reductase;
PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2]
89d1dlja2



not modelled 99.9 15 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
90c3d1lB_



not modelled 99.8 13 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nadp oxidoreductase bf3122;
PDBTitle: crystal structure of putative nadp oxidoreductase bf3122 from2 bacteroides fragilis
91d1ez4a1



not modelled 99.8 18 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
92c3pefA_



not modelled 99.7 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding;
PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+
93c3ggpA_



not modelled 99.7 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:prephenate dehydrogenase;
PDBTitle: crystal structure of prephenate dehydrogenase from a. aeolicus in2 complex with hydroxyphenyl propionate and nad+
94c3ckyA_



not modelled 99.7 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase;
PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation
95d1uxja1



not modelled 99.7 20 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
96c2g5cD_



not modelled 99.7 16 PDB header:oxidoreductase
Chain: D: PDB Molecule:prephenate dehydrogenase;
PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus
97c1np3B_



not modelled 99.7 13 PDB header:oxidoreductase
Chain: B: PDB Molecule:ketol-acid reductoisomerase;
PDBTitle: crystal structure of class i acetohydroxy acid isomeroreductase from2 pseudomonas aeruginosa
98c3ctvA_



not modelled 99.7 24 PDB header:oxidoreductase
Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase;
PDBTitle: crystal structure of central domain of 3-hydroxyacyl-coa2 dehydrogenase from archaeoglobus fulgidus
99d1ldma1



not modelled 99.7 17 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
100c3dzbA_



not modelled 99.7 18 PDB header:biosynthetic protein
Chain: A: PDB Molecule:prephenate dehydrogenase;
PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus
101c2pv7B_



not modelled 99.6 17 PDB header:isomerase, oxidoreductase
Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm)
PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution
102d2g5ca2



not modelled 99.6 17 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
103d1ojua1



not modelled 99.6 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
104d2b0ja2



not modelled 99.6 11 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
105c2uyyD_



not modelled 99.6 13 PDB header:cytokine
Chain: D: PDB Molecule:n-pac protein;
PDBTitle: structure of the cytokine-like nuclear factor n-pac
106c3l6dB_



not modelled 99.6 15 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase from pseudomonas putida2 kt2440
107c3b1fA_



not modelled 99.6 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative prephenate dehydrogenase;
PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans
108d1llca1



not modelled 99.6 19 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
109d1guza1



not modelled 99.6 17 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
110d2f1ka2



not modelled 99.6 15 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
111d1ldna1



not modelled 99.6 18 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
112c3dojA_



not modelled 99.6 12 PDB header:oxidoreductase
Chain: A: PDB Molecule:dehydrogenase-like protein;
PDBTitle: structure of glyoxylate reductase 1 from arabidopsis2 (atglyr1)
113c3cumA_



not modelled 99.6 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:probable 3-hydroxyisobutyrate dehydrogenase;
PDBTitle: crystal structure of a possible 3-hydroxyisobutyrate dehydrogenase2 from pseudomonas aeruginosa pao1
114c2i76B_



not modelled 99.6 11 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of protein tm1727 from thermotoga maritima
115d1t2da1



not modelled 99.6 22 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
116d1yqga2



not modelled 99.6 19 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
117c2ahrB_



not modelled 99.6 14 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative pyrroline carboxylate reductase;
PDBTitle: crystal structures of 1-pyrroline-5-carboxylate reductase from human2 pathogen streptococcus pyogenes
118d9ldta1



not modelled 99.6 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like
119d2ahra2



not modelled 99.5 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
120d1gv0a1



not modelled 99.5 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:LDH N-terminal domain-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0