07/01/2012 17:50:08 : INFO  : Run start: Sat Jan  7 17:50:08 GMT 2012
07/01/2012 17:50:12 : INFO  : Initialised job
07/01/2012 17:50:12 : INFO  : Renaming log file 'phyre2_20120107_175007.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/d20ec6bdf1ab288b/phyre_20120107_175007.log'
07/01/2012 17:50:13 : INFO  : Initialised job:
Sequence
>batch____
MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSA
KPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQVIAAIHGACLGGGLELA
LACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAL
KLGLVDDVVPHSILLEAAVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKT
QGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG
SDAPPAPLNSVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKV
RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF
ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ
GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG
IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPA
IYPLIGTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLG
GPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARGESFWKTTATDLQ

07/01/2012 17:50:13 : INFO  : Checked sequence
07/01/2012 17:50:15 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 17:50:15 : INFO  : PSI-BLAST 3 iterations
07/01/2012 17:53:58 : INFO  : PSI-BLAST 5 iterations
07/01/2012 17:59:37 : INFO  : Finished PSI-BLAST
07/01/2012 17:59:38 : INFO  : Running Buildali to generate a3m file
07/01/2012 18:59:32 : INFO  : Converting to HMM
07/01/2012 18:59:54 : INFO  : Calibrating HMM
07/01/2012 19:00:20 : INFO  : Searching HMM database
07/01/2012 19:17:52 : INFO  : Finished buildali
07/01/2012 19:17:53 : INFO  : Predicting secondary structure
07/01/2012 19:17:59 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 19:18:00 : INFO  : Predicting Disordered regions
07/01/2012 19:18:02 : INFO  : Predicted Disorder (Disopred)
07/01/2012 19:18:03 : INFO  : Running memsat_svm check
07/01/2012 19:22:05 : INFO  : Running memsat_svm full
07/01/2012 19:28:05 : INFO  : Predicted Transmembrane (memsat_svm) ID 'd20ec6bdf1ab288b'
07/01/2012 19:28:06 : INFO  : Initialising fold library search
07/01/2012 19:28:07 : INFO  : Initialised search input
07/01/2012 19:28:08 : INFO  : Building Ensemble models
07/01/2012 19:28:11 : INFO  : Building hh.c2d3tB_.model.1.pdb
07/01/2012 19:28:19 : INFO  : Building hh.c2x58B_.model.2.pdb
07/01/2012 19:28:25 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/d20ec6bdf1ab288b/hh.c2x58B_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/d20ec6bdf1ab288b/c2x58B_.2.pdb
07/01/2012 19:28:27 : INFO  : Building hh.c2wtbA_.model.3.pdb
07/01/2012 19:28:33 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/d20ec6bdf1ab288b/hh.c2wtbA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/d20ec6bdf1ab288b/c2wtbA_.3.pdb
07/01/2012 19:28:36 : INFO  : Building c2d3tB_.1.pdb
07/01/2012 19:28:43 : INFO  : Building c2x58B_.2.pdb
07/01/2012 19:28:51 : INFO  : Building c2wtbA_.3.pdb
07/01/2012 19:28:59 : INFO  : Building c1zcjA_.4.pdb
07/01/2012 19:29:08 : INFO  : Building c3k6jA_.5.pdb
07/01/2012 19:29:15 : INFO  : Building c3mogA_.6.pdb
07/01/2012 19:29:24 : INFO  : Building c1m75B_.7.pdb
07/01/2012 19:29:32 : INFO  : Building c1zejA_.8.pdb
07/01/2012 19:29:41 : INFO  : Building d1wdka4.9.pdb
07/01/2012 19:29:49 : INFO  : Building c2ep9A_.10.pdb
07/01/2012 19:29:57 : INFO  : Building c3bptA_.11.pdb
07/01/2012 19:30:03 : INFO  : Building d1nzya_.12.pdb
07/01/2012 19:30:11 : INFO  : Building c3moyA_.13.pdb
07/01/2012 19:30:18 : INFO  : Building c3g64A_.14.pdb
07/01/2012 19:30:25 : INFO  : Building c3kqfC_.15.pdb
07/01/2012 19:30:32 : INFO  : Building c3ju1A_.16.pdb
07/01/2012 19:30:39 : INFO  : Building c2ppyE_.17.pdb
07/01/2012 19:30:49 : INFO  : Building c3hinA_.18.pdb
07/01/2012 19:30:57 : INFO  : Building c2hw5F_.19.pdb
07/01/2012 19:31:04 : INFO  : Building c2vx2D_.20.pdb
07/01/2012 19:31:53 : INFO  : Finished HH model building
07/01/2012 19:31:54 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 19:32:46 : INFO  : html domain output complete ID 'd20ec6bdf1ab288b'
07/01/2012 22:39:13 : INFO  : Run end  : Sat Jan  7 22:39:12 GMT 2012
