Phyre 2 alignment of P77399 with c3pvcA_

Return to main results | Retrieve Phyre Job Id

Job Description | P77399
Confidence | 96.92% | Date | Thu Jan 5 12:28:38 GMT 2012
Rank | 348 | Aligned Residues | 45
% Identity | 16% | Template | c3pvcA_
PDB info | PDB header:oxidoreductase, transferase | Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis | PDBTitle: crystal structure of apo mnmc from yersinia pestis
Resolution | 2.31 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | K | D | P | G | S | D | A | P | P | A | P | L | N | S | V | G | I | L | G | G | G | L | M | G | G | G | I | A | Y | V | T | A | C | K | A | G | I | P | V | R | I | K | D | I | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | A | P | W | Y | H | R | P | A | A | T | R | C | D | D | I | A | I | I | G | G | G | I | V | S | A | L | T | A | L | A | L | Q | . | R | R | G | A | V | V | T | L | Y | C | A | D
Template Known Secondary structure |  |  |  | G | G | G |  |  |  |  |  | S |  |  | S | S |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | . | T | T | T |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |  | . | . | . | . | . | 290 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions