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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3pefA_

Fold library idPDB HeaderMoleculeTitle
c3pefA_PDB header: oxidoreductaseChain: A: PDB Molecule: 6-phosphogluconate dehydrogenase, nad-binding;PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+


Added to library: Sat Dec 10 18:13:24 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPEVVESCPVTFAMLADPAAA
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Known secondary structure (DSSP)



STT

SSGGGGTT

S



S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDR
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Known secondary structure (DSSP) STT


TT

S


TT




T

 .........150.........160.........170.........180.........190.........200.........210
Sequence NLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAM
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Known secondary structure (DSSP)
SSTTTT

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKGARAAGFGDEDFSAI
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Known secondary structure (DSSP)

TT



SSBT


TT
TTSBGGGG
 ......
Sequence FKTYER
Predicted secondary structure
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Known secondary structure (DSSP) GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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